Clostridium cf. saccharolyticum K10: CLS_15830
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Entry
CLS_15830 CDS
T02614
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03030
DNA replication
cso03430
Mismatch repair
cso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLS_15830
03430 Mismatch repair
CLS_15830
03440 Homologous recombination
CLS_15830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cso03032
]
CLS_15830
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_15830
Enzymes [BR:
cso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLS_15830
DNA replication proteins [BR:
cso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLS_15830
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLS_15830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
CBK77165
LinkDB
All DBs
Position
1515247..1518726
Genome browser
AA seq
1159 aa
AA seq
DB search
MAFTHLHVHTEYSLLDASSKIKELVARAKELGMDSLAITDHGVMYGVIDFYRAAREAGIK
PVLGCEIYVAPGSRFDREIGAGEDKYYHLILLAENNEGYQNLMKIVSTGFVEGFYYKPRV
DFETLERYSRGLICLSACLAGEVQRNLARGMYEEGKKAALRYQSIFGEGNFFLELQDHGI
PLQKTVNQGLLRMSQDTGIPLVATNDCHYIYREDEKSHDILLCIQTGKKVADENRMRYEG
GQYYLKSEEEMKSIFPYALEALENTHKIAERCNVEIEFGVTKIPQFDVPGGKTSWEYLNE
LCEEGFRTRYPDDDGTLRKRLDYELSVIQSMGYVDYFLIVWDFIHFARSHDIMVGPGRGS
AAGSIVSYCLRITDIDPIRYNLLFERFLNPERVSMPDIDIDFCFERRQEVIDYVVQKYGR
DRVVQIVTFGTLAAKGVVRDVGRVLDMPYAKCDAVAKMIPGDLGMTLDKALKTPELREAY
DSDPEIKYLIDMSRRLEGLPRHTSMHAAGVVISRNKVDEYVPLSRAADGSITTQFTMTTL
EELGLLKMDFLGLRTLTVIQNAVRQAEKTHHIKIDLNKIDYNDKAVLESLGTGKNDGVFQ
LESSGMKSFMKELKPENLEDIIAGISLYRPGPMDFIPKYLKGKNDRASITYDCPQLEPIL
SPTYGCIVYQEQVMQIVRDLAGYTLGRSDLVRRAMSKKKAAVMEKERQNFVYGNPEEGVK
GCIANGIDEKTANTIYDEMIDFAKYAFNKSHAAAYAVVSYQTAYLKYYYPVEFMAALMTS
VKDNVSKVSEYILTCRQMGMKIMPPDINEGEGGFSVSNGAIRYGLSALKSIGQTVVDEIV
KERTERGPFVSLADFIDRMSNKEVNKRTIESFIKSGALDSLPGTRKQKFLVSAALLEQKN
KEKKNSMEGQMSLFDFVEEEEKEQFQITFPDVGEYTKEELLAFEKEMLGVYVSGHPLEEY
MDLWKKNVTAVSSDFIVDEEEGHAKVRDGSYVTIGGMITEKTVKTTRQNKMMAFITVEDL
AGTVEVLIFPKDYEKKRDLLIVDEKVFVQGRVSIGDDPVGKVICERIIPFSMVPKEIWLK
YPNKEAYFGAEQELLEMLRLSEGHDQVVIYLEAERAKKVLPANWNVSADETLLRNLSAKL
GEKNIRVVEKTIEKIGKMN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcttttacacatcttcatgtgcatacagaatacagcctgctggacgcgtcgtccaag
ataaaggaactggtggcgagggcgaaggagctgggcatggacagtctggcaatcaccgat
cacggcgtcatgtatggagtgattgacttttaccgcgccgccagggaagccggaattaag
cctgttctgggctgcgagatctacgtcgccccgggctccaggttcgaccgggagatcggc
gcgggagaagataagtactatcatctgattctgcttgcagagaacaatgagggatatcag
aacctgatgaaaattgtgtccacgggctttgtggagggattctactacaagcccagggtg
gactttgagactctggaaaggtacagcaggggacttatctgcctttctgcgtgtctggca
ggtgaggtgcagagaaatctggcccgcggcatgtacgaggagggaaaaaaggcggctctc
aggtaccagagcattttcggggagggaaacttcttcctggagcttcaggatcacggaatc
cccctgcagaaaaccgtaaaccagggacttctgcgcatgagtcaggacacgggcatccct
ctcgtggccaccaatgactgccactatatctacagggaggacgagaaatctcatgacatt
ctgctctgcatccagacggggaaaaaggtggcagacgagaaccggatgcgctatgaggga
ggccagtattatctcaagtccgaggaggagatgaagagtatcttcccatatgccctggaa
gcccttgagaatacccataaaattgcagagcgctgcaatgtggagattgaatttggcgtc
acgaagatcccccagttcgacgtgccgggaggaaagacctcctgggaatacttaaatgag
ctgtgcgaggagggattccggacacggtacccggacgacgatggcactctgagaaagagg
cttgactatgagctgtctgtaattcagtccatggggtatgtggactatttcctcattgtc
tgggacttcattcactttgcccgctcccacgatattatggtggggccggggcggggctct
gcggctggaagcattgtgtcctactgcctcaggattacagacattgatcccatccgctac
aacctgctttttgagcgctttctgaacccggagagggtgtctatgccggatattgatata
gacttctgctttgaaaggcgccaggaggtcatcgactatgtggttcagaagtacggcagg
gaccgggtggttcagattgtcaccttcggtaccctggcagccaagggtgtggtcagggac
gtgggaagagtgctcgacatgccctatgcaaagtgcgacgcagtggccaagatgataccg
ggcgatctgggcatgacccttgacaaggctttaaagacaccggagcttcgggaggcctat
gacagcgatccggagatcaagtatctgatcgacatgagccgaaggctcgagggacttccc
agacatacgtccatgcatgcggccggcgtcgtgatcagccggaataaggtagatgagtac
gtgcctctctccagggctgcagacggctccatcaccacccagtttaccatgactaccctg
gaggagctggggcttttaaagatggactttctggggcttcgcaccctcacggtgattcag
aatgccgtgcgccaggcggaaaagacacaccatattaaaatcgacttaaacaagattgac
tataatgacaaggcggtgctggaatctctgggaacggggaagaatgacggtgtgttccag
ctggagagcagcggaatgaagagcttcatgaaggagctgaagccggagaatctggaggac
attatcgccggaatctccctgtaccgcccgggtcctatggattttatccccaagtatctg
aagggaaagaacgacagggcctccatcacctacgactgccctcagctggagcctattctg
agccccacctacggctgtatcgtctatcaggagcaggtaatgcagatcgtgcgggatctg
gccggctacaccctgggacgaagcgacctggtgcgccgtgccatgtcaaagaagaaggcg
gctgttatggaaaaggagcgccagaacttcgtctacggaaatccggaggagggagtgaag
ggctgcatcgcaaacggaattgatgaaaagacggccaacaccatctacgacgagatgatc
gactttgcaaaatacgccttcaacaagtcccacgccgcggcctatgcggtggtttcttac
cagacagcgtatctgaagtattactatccggtggagtttatggcggcccttatgacatcc
gtgaaggacaatgtgtccaaggtttccgagtatattctcacctgccgccagatggggatg
aaaatcatgccccccgacatcaatgagggggagggaggtttctccgtatcaaacggcgct
atccgctacggcctgtcggcgctcaagagcatcgggcagactgtggtggatgagattgta
aaagagagaacagagagagggccctttgtatccctggcagactttattgaccggatgagc
aataaggaggtaaataagaggaccatcgagagctttatcaaatcgggagccctcgacagc
cttcccggcacaagaaaacagaaatttctggtgtcggccgcccttctggagcagaaaaac
aaagaaaagaaaaattccatggaggggcagatgtctctgttcgactttgtggaggaggaa
gagaaggagcagttccagatcacatttccggatgtgggagagtacaccaaggaggagctt
ctggcctttgagaaagagatgctgggcgtgtacgtcagcggtcatcccctggaggagtat
atggacctctggaaaaagaacgtcaccgccgtctcctcggactttatcgtagacgaggag
gagggacatgccaaggtgagagacggctcctatgtgacaatcggaggcatgattacggaa
aaaacggtcaaaactaccagacagaataagatgatggcttttatcaccgtggaggatctg
gcgggaaccgtggaggtgctgatctttccgaaggattatgagaaaaagagggatctcctg
attgtggatgaaaaggtatttgtccagggaagagtttccatcggagatgatccggtggga
aaggtgatttgtgaaagaattatcccattttccatggttcccaaggaaatctggctgaaa
tatccaaacaaggaggcctatttcggggcggagcaggagcttctcgaaatgctccggctc
agcgagggtcatgaccaggttgtgatttatctcgaggcagagcgggcgaaaaaggtgctt
ccggccaactggaatgtgagcgccgacgaaaccctgctcagaaacctttctgcaaaactt
ggtgaaaaaaatatcagagtcgtggaaaaaactattgaaaagatagggaaaatgaattag
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