Clostridium cf. saccharolyticum K10: CLS_16340
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Entry
CLS_16340 CDS
T02614
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLS_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cso03019
]
CLS_16340
03110 Chaperones and folding catalysts [BR:
cso03110
]
CLS_16340
03029 Mitochondrial biogenesis [BR:
cso03029
]
CLS_16340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cso04147
]
CLS_16340
Enzymes [BR:
cso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLS_16340
Messenger RNA biogenesis [BR:
cso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLS_16340
Chaperones and folding catalysts [BR:
cso03110
]
Heat shock proteins
HSP60 / Chaperonin
CLS_16340
Mitochondrial biogenesis [BR:
cso03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLS_16340
Exosome [BR:
cso04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLS_16340
Exosomal proteins of other body fluids (saliva and urine)
CLS_16340
Exosomal proteins of breast cancer cells
CLS_16340
Exosomal proteins of colorectal cancer cells
CLS_16340
Exosomal proteins of bladder cancer cells
CLS_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
CBK77207
LinkDB
All DBs
Position
1567139..1568761
Genome browser
AA seq
540 aa
AA seq
DB search
MAKEIKYGVEARKALESGVNQLADTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIE
LKDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIVLRKGMK
KATEAAVEAIKNMSKSVKGKADIARVAAISSADDEVGEMVADAMEKVSKDGVITIEESKT
MKTELDLVEGMQFDRGYVSAYMATDMDKMEANLDDPYILITDKKISNIQEILPLLEQVVQ
AGAKLLIIAEDIEGEALTTLIVNKLRGTFTVVGVKAPGYGDRRKEMLKDIAILTGGQVIS
EELGLELKETTMDQLGRAKSVKVQKENTIIVDGCGNKEEISARIAQIKAQIEETTSEFDR
EKLQERLAKLSGGVAVIRVGAATETEMKEAKLRMEDALSAAKAAVEEGIIAGGGSAYIHA
TKEVEKVVEALDGDERTGGRIILKALEAPLFHIAANAGLEGSVIINKVRESEVGMGFDAY
NEKYVDMVEAGILDPAKVTRSALQNATSVASTLLTTESVVANIKEETPAMPGGAGGMGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaagtacggcgtagaagccagaaaagcactggaatccggcgtaaat
cagttagcagatacagtacgcgtgacattaggcccgaagggaagaaacgtagttcttgac
aagtctttcggagctccgcttatcacaaacgacggcgtgaccatcgcaaaggagattgag
ttaaaggatccatttgagaacatgggagcgcagctcgtaaaagaggttgccacaaagaca
aacgacgtagccggcgacggtacaacgacagccactgttttagctcaggctatgatcaat
gagggaatgaagaacctggcagcaggcgcaaacccaatcgttttaagaaagggtatgaag
aaggccacagaggctgctgtggaggctatcaagaatatgtccaagtccgtgaagggcaag
gctgatattgccagagtagctgctatctcctctgctgacgacgaggttggcgagatggtt
gcagatgccatggagaaggtttccaaggacggtgttatcactattgaggaatccaagacc
atgaagacagagcttgacctggttgaaggtatgcagtttgaccgcggttatgtttccgct
tacatggctactgacatggataagatggaagcaaacctggacgatccgtatatcttaatc
acagataagaagatttccaacatccaggaaatccttcctctgttagagcaggttgttcag
gccggcgcaaagctcttaatcatcgctgaggatattgagggtgaggctctcacaactctg
attgtcaacaagttaagaggaaccttcacagtagtaggagtcaaggctccgggatacggc
gacagaagaaaagagatgttaaaggatattgctatcctgactggcggccaggttatctct
gaggagctgggccttgagttaaaggaaacaaccatggatcagctgggacgcgcgaaatcc
gttaaggttcagaaggagaacaccatcattgttgatggctgcggaaacaaggaggagatc
tctgcaagaatcgcacagattaaggctcagattgaggagacaacatctgaatttgacaga
gagaaattacaggaaagacttgcaaagctgtccggcggcgttgctgtaatccgcgtaggc
gctgctacagagacagagatgaaggaagctaagcttcgcatggaggatgctttatccgca
gctaaggcagctgtagaggagggaatcatcgcaggaggcggttccgcatacatccacgct
acaaaggaagtggagaaggttgttgaggctctggacggagatgagagaacaggcggccgc
attatcttaaaggctctggaggctccgctgttccatatcgctgccaatgcaggactggag
ggctccgttattatcaataaggtaagagagtctgaagttggaatgggctttgatgcatac
aacgagaaatacgttgatatggtagaggcaggcatcctggatccggcaaaggttacaaga
agcgcccttcagaacgccacaagtgttgcttccacactgctgacaacagagtctgtagtt
gctaacatcaaggaagagacaccggctatgccaggcggtgcaggcggcatgggaatgatg
taa
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