Clostridium cf. saccharolyticum K10: CLS_18020
Help
Entry
CLS_18020 CDS
T02614
Name
(GenBank) recombination helicase AddA, Firmicutes type
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cso
Clostridium cf. saccharolyticum K10
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_18020
Enzymes [BR:
cso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLS_18020
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLS_18020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CBK77340
LinkDB
All DBs
Position
1750032..1753853
Genome browser
AA seq
1273 aa
AA seq
DB search
MGVNWTKEQRQVIESRDRNLLVSAAAGSGKTAVLVERIIRMITDGERPGDIERLLVMTFT
KAAASEMRERIHDAIEKKLKEDPGNEHLQQQAIMVQYAQITTIDSFCLHILREHFDCLDI
DPAFRVGDEGEMLLLRGDVMEELLEDWYGRHDPAFENFVETYASGKADGGIDDYIYQVYS
FSQSNPWPKEWIDECRRELSDTSVEALDRTGWMQFLLEDVRRQASEWAGQLQEAARLCSE
EDGPGAYLPMILSDLSNAEKLREVSGYDSFVQAASGFEFPKLAAVRGKHSPVNPDKKEKV
SECRKRIKKAVEKMKGQFLFASEEEILADLAGSSEAVLMLLTLAEDFAGRFEAKKRERNL
VDFNDLEHLALQVLYQEEKEGGEHRPSEAADLLAGQFDEILVDEYQDSNLVQEALIRAVS
RERFGTPNVFMVGDVKQSIYKFRLARPELFLEKYHSYTKEDSLYQKIELHQNFRSRRQVL
ESTNDVFYRIMTENLGSISYTEETALHPGASFEPLPQERGRKEAELSGSDAGQTAGEAGE
DGPLEEQRDPFSTEILLINTKDSVLEELDDDISDYTRQELEARMIGKRIRELTDPERGCP
VWDKELGRYRKAEYRDIVILLRSVSGWAESFVETLAHQGIPAFAESKTGYFTTIEVETML
NFLAVLDNPMQDIPLTAVLKAPFFGLTDRELAEIAARFKHSANRGQDRGMYGAICLYLGE
SDQAGETMQSSAEGEREPEILEKLASFFRVTEQLRREAVYLPIHELIYRIFDVTGYYDYV
SAMPAGETRRANLDMLVEKAAAYEATSYRGVFHFIKYIEKLKKYNTDFGEASTAAEGGNT
VRIMSIHKSKGLEFPIVFVAAMGKQFNRQDTRGKILIDSRFGIGTDYLNAETRLKAPTLK
KNVLKRRMDLENMGEELRVLYVAMTRAKEKLILTASDRNLEAKLEKWKELLDTGERGLAF
TLLSLAGSYLDWVLMAMEGGVCRIWMREVMAKELLSEEIGEQVRRKVTKDMLLWPDREEE
GEESPASQIFGLMGDEEYRKRLEESFSFQYPWEDELRLNTKMSVSDIKKEGDEELFEESA
FLPTIPSFLSGEEKEVQGARRGTAYHRAMELLSFHEIRKKSDIKEQLDRLVEEGKMTADS
RELVRESVIWPFFSSDLGKRMAAAQREGRLKKESQFVIGIPARQMGDFNSDELVLVQGII
DAFFEEDGELVLVDYKTDYVEKEETLRERYGIQLDYYRRALMQMEKKRVKETVIYSFRLG
EVRLQPEGSSQAR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaactggacaaaggagcagaggcaggtaattgagagcagggacaggaatctc
cttgtctcagccgctgcagggagcggaaagaccgcagttctggtggagcgaatcatccgg
atgatcacggacggggagaggccgggggatattgagaggctgctggtgatgacgtttacc
aaggcggcggcctcggagatgcgcgagaggatccacgacgccatcgagaagaagctgaaa
gaggatccgggcaatgaacatctgcagcagcaggcgattatggtgcagtatgcccagatc
actaccattgacagcttctgcctccatattttgcgggaacattttgactgcctggacatt
gaccctgcgttccgcgtgggggatgagggcgagatgcttctgctgcggggggatgtgatg
gaggagcttttggaggactggtatgggagacatgatccggccttcgaaaatttcgtggaa
acctatgcgtccggaaaggcagacggagggatagacgattacatctaccaggtttacagc
ttttcccagagcaatccctggccgaaggagtggatagacgagtgcaggagagagctgtcg
gacacctctgtggaggccctcgacagaaccgggtggatgcagtttctgctggaagatgtg
aggaggcaggcgtctgagtgggcggggcagcttcaggaggctgccaggctctgctcagag
gaggatgggcccggggcctatcttcccatgattctctccgatctgtcaaatgccgaaaag
ctccgggaggtgtcggggtacgacagcttcgtgcaggcggcgtcaggctttgaatttccc
aagctggccgctgtccgggggaaacattcaccggtgaacccggataaaaaggagaaggtg
tctgagtgcaggaagcggatcaagaaggctgtggagaagatgaagggacagtttctgttt
gcctccgaggaggaaatccttgcagatctggcaggaagcagcgaggcagttctcatgctc
cttacgctggcggaggattttgccggacggtttgaggcgaagaagagggagagaaacctg
gtggattttaacgatctggagcatctggcccttcaggtgctgtaccaggaggaaaaggag
gggggagaacacaggcccagcgaggcggccgatcttctggccggtcagtttgacgagatc
ctggtggatgagtatcaggacagcaatctggtgcaggaggcccttatcagggcagtgtcc
agagaacggtttggaacacccaatgtgtttatggtaggggatgtaaagcagagtatttac
aaattccgcctggccagaccggagctgtttctggaaaagtaccattcctacacgaaggaa
gacagtctctatcagaagattgagcttcaccagaatttcagaagccgcaggcaggtgctg
gagagcaccaacgacgtgttttaccggattatgacggagaatctgggctccatctcctac
acagaggagacagcccttcacccgggggcctcctttgagcccctgccacaggaaaggggc
cgaaaagaggcggagctttctgggtctgatgcaggacagactgcaggggaagccggagag
gatgggcctttagaggagcagagagatccgttttccacggagatcctcctcattaacaca
aaggacagcgtgctggaggagctggacgatgacatctccgactacacaaggcaggagctg
gaggccaggatgatcggaaagcggatcagagagctgaccgatccggagaggggatgcccg
gtctgggacaaagagcttgggcgctacaggaaggcggagtacagagatattgtcatcctt
ctgcgcagcgtctcagggtgggcggagagctttgtggagactctggcacaccagggcatt
ccggcctttgccgagtcaaagacaggctattttaccaccattgaggtggagacgatgctg
aattttctggcagtgctggataaccccatgcaggatattccccttaccgccgttttaaag
gctccgtttttcgggctgacggaccgggagctggcagagatcgcggccagatttaagcat
tctgcaaaccggggacaggaccggggaatgtacggggccatctgcctgtatctgggggag
agcgatcaggcaggagaaacgatgcagtcctctgcagaaggagagcgggaaccggaaatt
ctggaaaagctggccagcttcttccgggtgacggaacagctgaggagggaggccgtctat
ctgcccatccacgagctgatttaccggatctttgacgtgaccggctattatgactatgtg
tccgccatgccggcaggggagacccgcagagccaatctggacatgcttgtggagaaggcg
gctgcctatgaggccacaagctacagaggggtgttccattttatcaaatatattgaaaag
ctgaaaaagtacaatacagacttcggcgaggcctccactgcggcagagggcggcaatacg
gtgcggattatgagcattcacaagagcaagggactggagtttcccattgtctttgtggct
gccatgggtaagcagtttaacaggcaggataccagaggaaagattctgatcgactcccgg
tttggaatcgggacggactatctgaatgccgagacaaggctaaaggctcccaccctcaag
aaaaatgtgctgaagcgcaggatggatctggaaaacatgggggaggagctgcgggttctc
tatgtggccatgacgagggccaaggagaaactcatcctgacagcctctgacagaaatctg
gaggcaaagctggaaaaatggaaagagcttctggacacaggggagaggggacttgccttt
accctcctgtccctggccggctcttatctggactgggtactgatggccatggagggaggc
gtctgccggatttggatgcgcgaggtgatggcgaaggagcttttaagtgaagagatcggg
gagcaggtaaggcggaaggtgacaaaggatatgctcctgtggccggacagggaggaagaa
ggggaggagtctcctgcctctcagatattcgggctgatgggagatgaggagtacagaaag
aggctggaggagtccttctccttccagtacccctgggaggatgagctgcggctgaacacg
aaaatgtccgtgtccgacattaaaaaagagggagatgaggagctctttgaggagagcgca
ttcctcccgacgattccatccttcctgtccggtgaggagaaggaggtacagggggccagg
cggggaaccgcctaccacagggccatggaacttctgtccttccatgagatcagaaaaaaa
tctgatataaaggagcagcttgacaggcttgtggaggaggggaagatgactgccgattcc
agggagcttgtgagagagtctgtcatctggccatttttcagttcagatctgggaaagcgg
atggccgccgcccagagagagggaaggctgaaaaaggagagccagtttgttatcggcatt
ccggccagacagatgggagattttaactccgatgagctggtgctggttcagggaattatc
gacgccttcttcgaggaggacggagagctggtgctggtggactacaagacggattatgtg
gaaaaggaagagacgctgagggagaggtatgggattcagcttgactactacaggcgggca
ctgatgcagatggagaaaaagagggtgaaggaaacggtgatttactccttccgcctggga
gaggtgaggctgcagccagagggctcctctcaggccagatag
DBGET
integrated database retrieval system
