Clostridium cf. saccharolyticum K10: CLS_25080
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Entry
CLS_25080 CDS
T02614
Name
(GenBank) Type IV secretory pathway, VirD4 components
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CLS_25080
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
HTH_DNAJC9
DEAD
Motif
Other DBs
NCBI-ProteinID:
CBK77903
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Position
complement(2397621..2399453)
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AA seq
610 aa
AA seq
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MKTDKLRKFLIPNIPYVFIGWAFLKLSTAYRLAAGAGFLTKVMGIGQTIGPAFADFAPGL
NPVDWLVGIVGAVAFRLFIHMKSKKAKKFRRDEEYGSARWGNEKDIKPFVDPKFENNVIL
TGTEFLTMNTRPKIPANARNLNTCVIGSSGSGKTRFWLTPQLLQAHSSFVVVDPKGGVLS
QVGSFLQKRGYKIKVFNSIDFSKSMHYNPLAYIKNESDILKFVNALISNTKGEGKEGDPF
WTKAETLLYCALLGYIIFEGAEEDRNMNTLVDMISGMEVKEDDEDFMNAVDYMFAGLEKR
KPDCFAVKQYKKYKLSSGKTAKSILISCGARLAPFDIPQLREIMSYDELELDRMGDRRTA
TFFCISDTDSTYNFLVALAFSQMFNLLCERADNVHGGRLPHHVRVLWDEAANTGQVPGLE
KLVAVIRSREVSLVLLYQQLAQCKAIYDKNAETILGNMDSVIFLGGREASTIKEISENWL
GKSTISMQTDGRTRGQSESYSQNIQRLGRELMTPSELATMPGDRCILQLRGLPPFYSRKY
DLKQHPNYKFTAEADKKNAFNLDRLINRRRRPGPNEACEVYEVDVPAEALTEEDEDILNY
DDLDDPDAFV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagataagctccgaaaattcctcattcccaatatcccgtatgtgttcatcggc
tgggcgttcctcaaattgagtacggcctatcggctggccgctggtgcgggtttcctaaca
aaagtgatggggatcggccagactatcggcccggcctttgccgatttcgcgccggggcta
aaccctgttgactggctggttggtatcgtgggagccgtggcgttccgtctgttcatccac
atgaaaagtaaaaaagccaagaagttccggcgtgacgaggagtacggctcggcccggtgg
ggaaacgaaaaggacatcaagccctttgtcgatcccaagtttgaaaacaatgtcattctg
accgggacggagtttctcaccatgaacacccggcccaagatcccggccaacgcccgaaac
ctcaatacctgtgtcatcggatcgtccggctcgggcaaaacccgcttttggctcacgccc
cagcttttacaggcccattcctctttcgtggtggtagacccgaagggcggcgtcctgtcc
caagtgggcagctttctccaaaagcgggggtacaaaatcaaggtattcaacagcatcgac
ttctccaagtccatgcactataacccgctggcgtatatcaagaacgagtccgacatccta
aagttcgtcaatgcccttatttccaacaccaagggcgagggcaaagagggcgatccgttc
tggacgaaggccgaaacgctcctatactgcgccctgctgggctatatcattttcgagggc
gcggaggaagatcgcaatatgaatacgctggtggacatgatctccggcatggaggtcaag
gaggatgacgaggactttatgaacgcggtggactatatgtttgccgggttggaaaagcga
aagccggattgctttgctgtgaagcagtacaaaaagtacaagttaagcagcggcaagacg
gccaaaagcattttgatttcctgcggtgctcgtctggctccctttgacatcccccagctc
cgggagattatgagctacgatgaactggaacttgaccgtatgggtgacagacggacggca
acatttttctgcatcagcgatacggacagcacctacaattttttggtcgctctcgctttt
tcgcagatgttcaatctcctgtgtgaacgggccgacaatgtgcatgggggccgcttgccc
catcatgtgcgcgtcctgtgggacgaggcggccaatacgggccaagtgccggggctggaa
aagctggtggccgtcattcgttcccgcgaggtgagccttgtactgctctatcagcagctt
gctcaatgcaaggccatttacgataaaaatgcggaaacgatcctcggcaacatggacagc
gtgatattcctcggtggccgcgaggccagcactatcaaggaaatatcggaaaactggctg
ggcaagtccacgatctccatgcagacggatggccgcacacggggccagtccgaaagttac
agccaaaacatccagcggctgggccgggagctgatgacccccagcgagcttgccacaatg
cccggtgatcggtgcatcttgcagctccggggcctgcccccgttctattcccgcaaatac
gatctgaagcaacaccccaactacaagtttacggctgaggccgacaagaaaaacgccttt
aacctcgacaggctgataaaccgccgcaggcggcccggccccaacgaggcttgtgaggtg
tacgaagtggatgtgcccgccgaggcgctcacagaagaggacgaggacatcctcaactat
gacgacctcgacgatccagacgcttttgtataa
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