Clostridium cf. saccharolyticum K10: CLS_27130
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Entry
CLS_27130 CDS
T02614
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLS_27130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_27130
Enzymes [BR:
cso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLS_27130
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLS_27130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Zn_ribbon_6
TrwB_AAD_bind
DZR
AAA_19
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CBK78064
LinkDB
All DBs
Position
complement(2580194..2582656)
Genome browser
AA seq
820 aa
AA seq
DB search
MTAADSRRKADEHMKHTFANIIIDISHEKVDRTFQYIIPDQLKSLVRAGVQVEIPFGKGN
SIRRGFVVEVTDTPEFDISRMKEIAGVSADRLSVQSQLIELAWEMKRLYGATMNQTLKTV
LPVKQKIKAREKRTIRCLLSKEELLRALSEARKKSYRARIRLYEAFLEEPEIPAQVLENQ
LNITASSLKPLIEKGVVEVVREEISRNPVEGEGTSSNILPLNEEQKRAVEEFWGSYRERH
GDCQAPSEGREKTWLLYGITGSGKTEVYMEMLSRVLAMGRQAIVLIPEIALTYQTVMRFY
RRFGSRISIINSRLSQGERYDQWERAMKGEVDIMIGPRSALFTPFSNLGLIIIDEEHEGA
YKSETMPRYHAREVAGLRARLCGADVVLGSATPSVESFTRALQGEYGLLRLTRRAAENSR
LPQVETVDLREELKAGNKTMFSRRLTELMEDRLGRGEQMMLFMNRRGYSSFVSCRSCGEA
VKCPHCDVSLTLHNNGRLCCHYCGYSVPMPEKCPSCGSPYIAGFGTGTQKLEEMTKRLFP
GAKVLRMDADTTSKKGGHEEILSAFAGGEADILIGTQMIVKGHDFRNVTLVGIMAADLSL
NTPDYRCAERTFQLLVQAAGRAGRGERGGNVVIQTYSPDHYSIEAAARQDYEAFYRREIA
YRRMMNYPPVCRMSAVLFAARDEALLEAFTEAALSRAEELLSRRRVPFQLIGPVNAPVYK
VNDIYRKILYIKSQSYDIMAAERHYICAEPPAPEGSLNTPAASAHPSERYISGGYDGMDV
CGQRPSEPVYGEIGGIRECMDSLQKSNPRFSSVSVQYDVW
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcagacagcagacggaaggctgatgagcatatgaagcacaccttcgcaaac
attatcatcgatatttcccatgaaaaggtagaccgcacctttcagtacatcatcccggat
cagcttaagtcccttgtcagggccggcgtccaggtggaaatccctttcggaaagggaaat
tctatccgccgggggtttgtggtggaggtgacggacacaccggaatttgatatttcgcgg
atgaaggagatagctggggtttcggctgaccgattgtcagtccaatcccagctaattgag
cttgcctgggagatgaagcgcctctacggcgccaccatgaatcagaccctgaaaaccgtg
cttccggtaaagcagaagattaaggccagagaaaagcggaccattcgctgcctgctttcg
aaggaagagcttttaagagccctctccgaggccagaaaaaagagctaccgcgcccgcatc
cgcctctatgaggcctttctggaggagccggagattccggcgcaggtgctggaaaaccag
ttaaatataaccgcgtcctccctgaagcctctgattgagaagggtgtggtggaggtggtg
agggaggaaatcagcagaaatcccgtagagggagaagggacttcctccaatatcctgcct
ttaaacgaagaacagaaaagagccgtggaggaattctggggttcctaccgggaaagacac
ggggactgtcaggcaccgtcagagggccgggagaaaacgtggctgctctatggaattaca
ggaagcggcaagacggaagtgtatatggaaatgctgtcgagagttcttgccatggggcgg
caggccattgtgctcataccggagattgccctgacctaccagacggttatgcggttttac
cggaggttcggcagcaggatctccattatcaattccagactgtcccagggagagcggtat
gatcagtgggagagggccatgaagggagaggtggacattatgatcggcccccgctcggct
ctcttcacccccttttccaacctgggactgattatcattgacgaggagcacgagggggcc
tataagagtgaaaccatgccccgctaccatgccagggaggtggccggactgcgcgcccgc
ctttgcggagcagatgtggtgttaggctccgcaaccccttctgtggaatcctttacgagg
gctcttcagggagagtacgggcttttaaggcttaccaggcgggcggcagaaaacagccgc
ctgccgcaggtggagacggtggatctgcgggaggagctgaaagcagggaacaagaccatg
ttcagcaggcggctgacagagctgatggaggacaggcttggccgcggggaacagatgatg
ctttttatgaaccggagaggctattccagctttgtgtcctgccgctcctgcggggaggcc
gtcaaatgtcctcactgcgatgtgtcgctgacccttcacaataacggaaggctctgctgc
cactactgcggctactccgttcccatgcctgagaaatgcccgtcctgcggctctccctat
atcgccggctttggaacgggaactcagaagctggaggagatgacaaagagactgtttccg
ggggcaaaggtactcaggatggatgcagataccacgtcaaaaaagggaggccatgaagag
attctctcggcctttgccggcggagaggctgatattctgatcggaacccagatgattgtg
aagggccacgatttcaggaatgtgaccctggtgggaatcatggcggcggatctgtcccta
aacacgccggactaccgctgcgccgagcgcaccttccagcttctggtgcaggcggccggg
agggccggacggggagagcggggaggaaatgtggtaatccagacctacagtccggaccac
tacagtattgaggcggcggccagacaggattacgaggccttctaccgcagggagattgcc
tacaggagaatgatgaattatccgcctgtctgccggatgtcggcagttctctttgcagcc
agggacgaggcgctccttgaagccttcacagaggcagctctaagcagggccgaagagctt
ctctcccgccgccgggtgccgttccagctgatcggcccggtcaacgcgccggtttacaaa
gttaatgatatatacagaaaaattttatatattaagagtcaaagttatgatataatggcc
gcagagcggcattatatctgcgccgagccgccggcgcccgaagggagcctgaacactcct
gcggcgagtgcgcatccctcggagagatacatatccggaggatatgacgggatggacgtt
tgcggacagaggccgtctgagcctgtgtacggcgaaatcggcgggatacgggaatgtatg
gattccctgcagaaatcaaatccccggttcagctccgtgtccgtgcagtatgatgtatgg
tag
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