Clostridium cf. saccharolyticum K10: CLS_27840
Help
Entry
CLS_27840 CDS
T02614
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso03030
DNA replication
cso03410
Base excision repair
cso03420
Nucleotide excision repair
cso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLS_27840
03410 Base excision repair
CLS_27840
03420 Nucleotide excision repair
CLS_27840
03440 Homologous recombination
CLS_27840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cso03032
]
CLS_27840
03400 DNA repair and recombination proteins [BR:
cso03400
]
CLS_27840
Enzymes [BR:
cso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLS_27840
DNA replication proteins [BR:
cso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLS_27840
DNA repair and recombination proteins [BR:
cso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLS_27840
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLS_27840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
nSTAND_NTPase4
Nnf1
Motif
Other DBs
NCBI-ProteinID:
CBK78122
LinkDB
All DBs
Position
complement(2653890..2656850)
Genome browser
AA seq
986 aa
AA seq
DB search
MEKVVLIDGHSILNRAFYGVPELTNSRGLHTNAVYGFLNIMFRVIEDEKADCLAVAFDLK
EPTFRHKMYEAYKGTRKPMPEELREQVPVIKEVLSAMGIPILSVPGYEADDVLGTIAGRC
AAEGAEVSIVSGDRDLLQLADEHVKIRMPRTNRGGTEIKDFYPADVKEQYQVTPKEFIDV
KALMGDASDNIPGVPSIGEKTATALITTYGSIENAYAHLDEIKPPRAQKALREHYDMAQM
SKELATICTDCPVEFSMEEAKIGELYTPQAYELMSQLEFKSLLLRFDANARTENQVEKQF
RAVTGREAAEAVFAKARKAKDAGAQLIVEGQSVQALGLAFGETDIYCLETGGDVTGEYLA
GQLNELIASGVRMSFLDLKSQLGFLPAAQTECDRPDGKSPEGKEGEGCGQLLFDTGVAGY
LINPLKDTYDYDDLARDFLELTVPSRADLMGKKSFAQALLERPEKEGDGETTAEAEKKGL
RTAGFADFEQTEGATPFDETESSTGDEESGQMSLFSFMDSSEESLKEGKEQEKTEPVREE
QTAGKVSIRTALNPAEQCICHMAYTAWKSRERLTKKLEELDMKELFYTIEMPLIFSLFHM
EQAGICVKREELHDYGEKLRVQIERLEQEIYGETGEHFNINSPKQLGEILFGKMELPYGK
KTKTGYSTAADVLEKLAPEYPVVQKILDYRQLTKLKSTYADGLAGYIREDGRIHGTFNQT
ITATGRLSSTEPNLQNIPVRMELGREIRRVFVPEEGSVFVDADYSQIELRVLAHMSGDER
LIEAYRKAEDIHAITASEVFHVPLEEVTPLQRRNAKAVNFGIVYGISAFGLSEDLSITRK
EALEYINRYFETYPDVKKFLDRLVEEGKEKGYVTTMFKRRRPVPELSSKNFMQRSFGERV
AMNSPIQGTAADIIKIAMNRVDNRLRREGLKSKIVLQVHDELLIEAKKEELKRVQTILSE
EMKHAADLRVALEIDMKTGNSWFETK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtagttttgatagatggacacagcattttgaacagggccttttacggtgtg
ccggagctgacaaattccagagggcttcatacgaatgcggtgtacggtttcctgaacatt
atgttccgggtgatcgaggatgagaaggctgactgcctggcagtggcctttgatttgaag
gagccgaccttccgccacaagatgtatgaggcttataaggggacgagaaagcccatgccg
gaggagctgagagagcaggttcccgtgatcaaggaggtgctctcggccatgggaatcccg
atcctttctgtgccgggctatgaggcagatgatgtgctgggaaccatcgcgggaaggtgt
gcggcagagggagccgaggtttccatcgtttcaggagatcgggatctgcttcagctggcg
gacgagcatgtgaaaatcaggatgccgagaacgaacagaggcggtacggagattaaggat
ttttatccggcagatgtgaaggaacagtatcaggtgactccgaaggagtttattgatgtg
aaggcactgatgggagatgcgtccgacaacatcccgggagtcccctccatcggcgagaag
acagccacagcccttatcaccacatacggcagtattgagaatgcctatgcccacctggat
gaaattaagccgccgagagcccagaaggctctcagggagcactatgacatggcgcagatg
agcaaagagctggctaccatctgcacagactgtcctgtggagttttccatggaagaggcg
aaaatcggggagctgtacacgccccaggcctatgagctgatgagccagctggaattcaaa
tccctgctgctccggttcgacgcaaacgccagaacggaaaatcaggtggaaaaacagttt
cgggctgtgaccggccgcgaggccgcggaggctgtttttgcaaaggccagaaaggcaaag
gacgcaggcgcgcagctgattgtggaagggcagagcgtgcaggcgctgggactggcattt
ggggagacagacatttactgcctcgagacaggcggggatgtgacgggagagtatctggcc
ggacagctgaatgaactgattgcctcgggagtcagaatgagcttcctggatctgaagagc
cagcttggctttctccctgcagcgcagacagagtgtgacagacctgacgggaagagtccg
gaagggaaagagggagaaggctgcggccagctcctgtttgacacaggggtggcaggctac
ctgatcaaccctctgaaggatacctacgattatgacgatctggccagagattttctggag
ctgaccgttccgtcccgggcggacctgatgggaaagaagagctttgcacaggctctttta
gaaagacctgagaaagagggggacggtgaaacaactgctgaggctgagaaaaaaggtctt
cggacagccgggtttgcagactttgaacagacggagggggcaactccctttgacgagaca
gagagcagcacaggagatgaggaatccggacagatgagcctgttttcctttatggattcg
tcagaggaatccttaaaggaaggaaaggagcaggaaaaaacagagcccgtcagagaggaa
caaacagcggggaaggtttccatccggactgcgttaaacccggcggaacagtgcatctgc
catatggcctacaccgcctggaaatccagggagaggctgacgaaaaagctggaagagctg
gatatgaaggagctcttctataccattgagatgccgctgattttcagcctgtttcacatg
gagcaggcgggaatctgtgtgaagcgggaggagcttcacgactacggggagaagctgaga
gtccagattgagaggctggaacaggagatttacggggaaacaggggagcactttaacatt
aactctccgaaacagctgggagaaattctgttcggcaagatggagctgccctacgggaaa
aagacaaagaccggctattccacagccgccgacgtgctggaaaagctggcaccggagtat
cctgtggtgcagaaaatcctggactaccgccagctgaccaagctcaaatccacctacgcg
gacggactggccggctatatcagggaggacgggcggattcacggaaccttcaaccagacg
atcactgccaccgggcggttaagcagcacagagccgaatctccagaatattccggtgcgg
atggagcttggaagagagatccgccgcgtctttgtgccggaggagggcagcgtgtttgtg
gacgccgactattcccagattgagctgcgggtgcttgcccacatgtcaggggatgagagg
ctgattgaggcatacaggaaggctgaggatatccatgccattacggcttcagaggtattc
catgtgccccttgaggaggtgacgcctctccagagaagaaacgccaaggctgtcaacttc
gggattgtctacggaatcagcgcctttggcctcagcgaggatctgagcattacgagaaag
gaagcgctggaatatataaaccggtattttgaaacctatccggatgtgaagaaattcctg
gaccgcctggtggaggagggaaaggagaagggctatgtgacgaccatgttcaaacgcagg
cgtccggttcccgagctttcctccaaaaactttatgcagcgctccttcggcgagcgggtg
gccatgaactcccccattcagggaacggctgccgatattatcaagatagccatgaaccgg
gtggacaacagactcaggagagagggcctgaaatcgaaaattgtgcttcaggttcacgac
gagcttctgatcgaggcaaaaaaggaggagcttaaaagggtgcagacgattctttccgag
gagatgaagcatgcggcggatctgagagtggccctggaaatagatatgaaaacgggaaat
tcctggtttgagacgaaatag
DBGET
integrated database retrieval system
