KEGG   Clostridium cf. saccharolyticum K10: CLS_33270
Entry
CLS_33270         CDS       T02614                                 
Name
(GenBank) exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cso  Clostridium cf. saccharolyticum K10
Pathway
cso03410  Base excision repair
cso03430  Mismatch repair
cso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLS_33270
   03430 Mismatch repair
    CLS_33270
   03440 Homologous recombination
    CLS_33270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cso03400]
    CLS_33270
DNA repair and recombination proteins [BR:cso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CLS_33270
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CLS_33270
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CLS_33270
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 Cep57_MT_bd
Other DBs
NCBI-ProteinID: CBK78533
LinkDB
Position
complement(3182711..3184420)
AA seq 569 aa
MAEEIWMLQTKRADFGVIAERFGIDPVTARVIRNRGIEGMENIERYLYGNLDGLYSPWLL
KDMKPAVEILRQKITAGKRIRIVGDYDIDGVCSTYILYTALRRLGAEADYAIPDRIKDGY
GINESIIREAHEDGIDTILTCDNGISAFSQISLAKEFGMTVIVTDHHEVPLDAEAEVIPP
ADAVVNPKQRDCRYPFPEICGAVVAYKLVEALYEEYGIAREEWLDMLEFAAIATVGDVMR
LQDENRIIVKYGLRRMAETKNLGLKKLAEKNNLDLSTITAYHIGFVIGPCLNAGGRLQTA
KLALSMLLAETEDEAEALAQELKSLNDMRKDMTEQWTAEAKLLADTRYRDDKVLVVFLPE
CHESLAGIIAGRLREYCQKPALVLTRGEEAVKGSGRSIEAYHMFKKLSEVKELLLKFGGH
PMAAGLSLLEENIEPFRKALNENSGLTEEDFKAKVWIDVPMPIDYIKERLVEELKILEPF
GQGNEKPLFAQKGVRIRSCRVIGKNKNVVKMVLEGQGGRAMDGMLFTDGLAFEEERNGRR
MLDIVYYPEINEYNGSRNIQVVIRRYRFC
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcagaggaaatttggatgcttcagacgaaacgggctgattttggggtgattgccgag
cggtttggaatcgatccggtgaccgccagagtgatcagaaaccgcggaatcgaggggatg
gagaatatagagcggtatctgtatggaaatctggacggcctgtattccccgtggcttttg
aaggatatgaaaccggctgtagaaattttgaggcagaaaattacagcgggaaagcggatt
cggatagtgggagactacgatattgacggcgtctgctctacctatattctgtatacagcg
ctcaggcgccttggcgcagaggcagattatgcgatccctgaccgcattaaggatggatat
ggaatcaatgaatccattatcagggaggcccatgaggatgggatcgacacaattctgacc
tgcgacaatgggatatcggccttttcacagatcagccttgccaaagagttcggcatgact
gtgattgtgaccgatcaccacgaggttcccctcgacgcagaggcggaggtgattccgccg
gctgacgctgtcgtaaatccgaaacagagagactgcagatatccatttccggaaatctgc
ggggccgtggtggcatacaagctggtggaggctctctatgaggaatacgggattgcgcgg
gaggaatggctggacatgctggaatttgcagccattgcaacagtgggagatgtgatgagg
ctccaggatgaaaacagaatcattgtcaaatacgggctccgcaggatggcagaaacgaag
aatctggggcttaaaaagctggcggaaaagaacaatctcgatttgagtacaataacggcc
taccacatcggattcgtcatcggtccctgcctgaatgccggaggcagacttcagacggca
aagctggccctgtccatgcttctcgcggaaacggaagacgaggcggaagccctggctcag
gagcttaagagcttaaacgatatgaggaaggatatgacagagcagtggacggcagaggca
aagcttttggctgacacccggtacagggatgacaaggttctggttgtattcctgccggaa
tgccacgaatctctggccggaattatcgcgggaaggctcagggaatactgccagaagccg
gcgctcgtgctgaccagaggagaggaggctgtgaagggctccggacgctccatagaggct
taccacatgtttaaaaagctgtctgaggttaaggagcttcttctcaagttcggagggcat
ccgatggcagccgggctctcgcttctggaagaaaacatcgagccgttccggaaggctctg
aatgaaaattccggcctgacagaggaggattttaaggcaaaggtgtggatcgacgtgccg
atgcccattgactacataaaggagagactggtggaggagcttaaaattctggagcccttt
ggccagggaaatgaaaagcccctgtttgcccagaaaggggttagaatcaggagctgccgg
gtaatcgggaaaaataagaatgtggtaaaaatggttctggaagggcagggaggacgggcc
atggacggaatgctgtttacagacggcctggccttcgaggaagagcgaaatgggcggaga
atgctcgacatcgtatattaccctgaaatcaatgaatacaacggcagtagaaatatccag
gtggtgatacgcaggtacaggttctgttaa

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