Clostridium cf. saccharolyticum K10: CLS_34280
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Entry
CLS_34280 CDS
T02614
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
K11070
spermidine/putrescine transport system permease protein
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CLS_34280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cso02000
]
CLS_34280
Transporters [BR:
cso02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
CLS_34280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
BPD_transp_1
SBP_bac_11
Lipoprotein_8
PetM
Motif
Other DBs
NCBI-ProteinID:
CBK78616
LinkDB
All DBs
Position
complement(3279311..3281338)
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AA seq
675 aa
AA seq
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MNGKLNVNETEMISTAPADGGPSSGAAQNSSHLWKRRLRKFFQDFYLVIILIFLYAPIFT
MMVLSFNDSKSRTLWGGFTTKWYAQMFENQSIMDALYNTLLIAFISALAATILGTLAALG
INSMKRVPKNITMGINNIPILNSEIVTGISLMLTFIAFGISLGFKTILIAHITFNLPFVI
LSVLPKLRQTSRYTYEAALDLGANPLQAFFKVVFPDIMPGVLSGFLMGFTLSLDDFIITH
FTRGAGINTLSTLIYSEVRRGIKPSMYALSTIIFVTVLALLLITNFAPKESGGKPQKDMQ
KNADKAGRASGPDLKKGLLAAASFAIVAVVCFTTYTRYASKSADELYVYNWGEYIDPSVI
EEFEAETGIRVTYDLFETNEEMYPVVEAGGVSYDVVCPSDYMIQKMAENGLLAELNYDNI
PNIANIDSQYLEKAESFDPGNRYAVPYTWGTVGILYNTERIKELGVQPPSRWADLWDPAY
KGEILMQDSVRDAFMVALKSLGYSMNSTDEGELTQARDLLIAQKPLVQAYVIDQVRDKMI
GGEAAVGVIYSGEMLFIQEEVARQNLDYSLEYVIPEEGTNIWIDAWVIPKNAKNKENAEK
WINFLCRPDIAKKNFEYITYATPNRAARELLEPEIQNNKALFPDTDQLENSEVFQYLGDA
VDMLYNNLWKEVKSQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaaattaaatgtaaatgaaacggaaatgataagtactgcgccggcagacgga
ggcccttcctccggcgcagcccaaaacagctcccatctctggaagagaaggcttcggaag
ttttttcaggatttttacctggtgatcatcctgattttcctgtacgccccgattttcacc
atgatggttctgtccttcaatgactccaagtccagaacactctggggcggattcaccacc
aaatggtacgcgcagatgtttgagaatcagtccattatggacgccctctacaacacgctg
ctcatcgccttcatctcagctctggcagccaccatcctcggaactctggcagccctgggc
atcaacagtatgaagcgggttccgaaaaacattaccatgggcatcaacaatatcccgatt
ttaaactctgagatcgtgaccggtatttccctgatgctcacctttattgcctttggaatt
tccctgggttttaagaccattctgattgcccacattacctttaacctgccctttgtcatt
ttaagcgtcctgcccaaactccggcagaccagccgctatacctatgaggccgccctcgac
ctgggcgcaaatccgcttcaggccttttttaaggtagtgttcccggacattatgcccggc
gtgctgtcaggctttctgatgggctttaccctgtctctggacgactttatcatcacccac
tttaccagaggcgcaggcatcaacactctgtccaccctgatttacagcgaggtgagaagg
gggatcaagccttccatgtacgccctgtccacgatcatcttcgtgacagtgctggctctc
cttctgattaccaactttgctccgaaggagagtggagggaagccgcagaaggacatgcag
aaaaatgcagataaggcggggagagcctccggcccggatctgaaaaaggggcttctggcc
gcagcttccttcgccatcgtggccgttgtctgctttaccacctacaccaggtatgcgtca
aaatccgcggacgagctctacgtgtacaactggggggaatacattgatccgtctgtcatc
gaggaatttgaggcggagacaggcatccgggttacctatgacctgtttgagaccaacgag
gaaatgtatcccgttgtggaggccgggggcgtaagttatgacgttgtctgtccttctgac
tacatgattcagaaaatggcggaaaacggccttctggctgagctcaactacgacaacatt
ccaaatatcgcgaatattgacagccagtatctggaaaaagccgagagcttcgatcctgga
aaccggtatgcagttccctacacctggggaaccgtcggcatcctctacaatacagagcgg
ataaaggaactgggcgtgcagcctccgtccagatgggcggatctgtgggatccggcctac
aaaggcgagattctcatgcaggacagtgtgcgtgacgcctttatggtagctctcaagtcc
ctgggatattccatgaactccacagacgagggcgagcttacccaggcaagggatctgctg
attgcccagaagcctctcgtacaggcctacgtgattgaccaggtgagagacaagatgatc
ggcggcgaggctgccgtgggcgtcatctactccggcgaaatgctctttatccaggaggag
gttgccagacagaacctagattacagcctggaatacgtgatcccggaggaagggacgaat
atctggattgacgcctgggtgattccgaaaaatgcaaaaaataaggaaaatgcagaaaag
tggattaacttcctgtgcaggcctgacattgcgaagaaaaattttgaatacattacctat
gccaccccaaacagagcggcaagggagcttctggaaccggaaattcagaacaacaaggct
ctcttccctgacacggaccagctggaaaattctgaggtgttccagtatctcggggatgcg
gtggatatgctttacaataacctctggaaagaggtaaaatcccagtaa
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