Clostridium cf. saccharolyticum K10: CLS_35250
Help
Entry
CLS_35250 CDS
T02614
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cso
Clostridium cf. saccharolyticum K10
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cso03016
]
CLS_35250
Enzymes [BR:
cso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CLS_35250
Transfer RNA biogenesis [BR:
cso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLS_35250
Prokaryotic type
CLS_35250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
CBK78687
LinkDB
All DBs
Position
3364429..3365535
Genome browser
AA seq
368 aa
AA seq
DB search
MKRIRLTVAYDGTNYCGWQLQPNGITIEEVLNRALSELLKEEIQVVGASRTDSGVHAMGN
IAVFDTESRIPPEKICFALNQRLPEDVRVQKSEEVPLTFHPRKANCVKTYEYKILNRKID
MPLNRLYCHFCYFDLDVEKMRRAAAFLVGEHDFKSFCTVRTQAEETVRTIYSLTVDRGAD
DVIVIRISGSGFLYNMVRIITGTLVKIGMGVWPPEYMEEILEARDRAAAGPTIPAKGLTL
VSMEYEKEPADCVRGENRHWSYCLDQRHLSEGYSVLTIERCEEGELDGVLRRMIHQAVRN
GAKRVYVTDTGLTGPASAGPEAAGTGERTCGAAGRLHPGDKFGYYRLAEPDGGDETPADG
FLTAVYEG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggatcagactgacggttgcctatgacggtaccaattactgcggctggcagctg
cagccaaacggaatcaccatagaggaggttttaaacagggcgctctcagagcttttgaag
gaggagattcaggtggtgggagccagccgcaccgattccggcgtgcacgctatggggaat
attgcggtgttcgacacagagagccggatcccgccggagaaaatctgctttgctctgaac
cagaggctgccggaggatgtgagggttcagaaatcagaggaggtgcctctgacgtttcac
cccaggaaggccaactgtgtgaaaacgtatgagtataagatcctgaaccggaaaatcgat
atgcctttaaaccggctgtactgtcatttctgctattttgacctggatgtggagaaaatg
aggagggcagccgcctttctggtgggagagcatgattttaagagcttctgcacggtgaga
acccaggcggaagagacggtgcgcacgatctacagccttacggttgacaggggggcagac
gacgtgattgtgatccgcatcagcggaagcggcttcctctacaatatggtacggattatc
acgggaacccttgtaaagatcggcatgggcgtatggccgccggagtatatggaggagatt
ctggaggccagggacagggcggcggcagggccgacgatcccggctaaggggctgacgctg
gtgagtatggagtatgagaaggagccggcagactgtgtgaggggagaaaacagacattgg
agctactgcctggatcagaggcatctctcagagggctattctgtcttaaccattgagcgg
tgcgaggaaggggagcttgacggcgtcctgcggcgcatgattcaccaggcggtgagaaac
ggtgccaaacgggtgtatgtgacagacaccgggcttacaggccctgcctctgcaggcccg
gaggccgccgggacaggggagagaacctgcggggcagccggaaggcttcatccgggggat
aagtttggctactaccgcctggcagagccggatgggggagacgaaacacctgcagacggc
ttcctgacggcggtgtacgaggggtaa
DBGET
integrated database retrieval system
