Clostridium cf. saccharolyticum K10: CLS_37770
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Entry
CLS_37770 CDS
T02614
Name
(GenBank) Putative peptidoglycan binding domain./L,D-transpeptidase catalytic domain.
Organism
cso
Clostridium cf. saccharolyticum K10
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_4
YkuD_2
Motif
Other DBs
NCBI-ProteinID:
CBK78884
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Position
3628427..3630637
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AA seq
736 aa
AA seq
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MSDFSRKDEPDQNMEVRSAGQTDEIEDGLEWIEETEEAPQTDGMPEKFRSEVEITEDSGA
DMSGDTVLDEMEEGVLEELAEEEEPEEKENGQGNIMPTEEAILRAAGSGFTEPPRKERRA
QTQAAPPEADRIREKIRPSEERAGGGDANRSRGRSRRKGSVPPESLRRAGKDIQSDEPSV
RKVRGRRPGQGERRFGRRQAAVAAGAAAAVLLIGGAVYVGLGQKYRNVFFPGTEINGLDV
SGKTVAEAEQMISDGISGYTLTIEERGDKTEQLSQADIGLRAEFDGTMEKIIASQNPLAW
GEYVFSPASYKIKTMMAYDEEAFQKAVEGLECFDEDAPAPEDAHLSEYTEGEGYSIVPEE
KGAKAVYEVVEKGISDAILNLQPSVSLEEIGGYEEPEVTSEDETLIKLCDSMNKAAGVVI
TYQFGDATETLSGDRIHEWLVPNADGTVGVDFGKVNAYVKELADKYNTNNKAKNLKTSYG
KTVTIRGGTYGWKINQSAEADELAALIRSGQSQSGREPVYSQKAASHGANDYGDTYVEIN
LTAQHLFFYKNGKLLVESDFVSGNLSKGWGTPAGSYPLTYKQRDAVLKGENYRTPVDYWM
PFNGGIGMHDAKWRSSFGGTIYKTGGSHGCINLPHSVAKKIYENISAGMPVLCYNLEGTE
KASEPEKPKETQPSTQAPAESTAPAPTEPSTQPPAESTAPAPTEPSTQAPTQPSAQEPDG
PASDDGGSGGASGPGM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttcagcagaaaggatgaaccggatcagaacatggaagtccggtcagccgga
cagacagacgaaatcgaagatggactggagtggatagaagaaacagaagaggcgccgcag
acagatggaatgccggaaaaattcagaagtgaggtagaaatcacggaagattccggggca
gatatgtccggagacacagtgctggacgagatggaggaaggcgttctggaggagctggca
gaggaggaagaaccggaggaaaaggaaaacgggcaggggaatattatgcctacagaagag
gcgattcttcgcgctgccggaagtggttttacggagccgcccaggaaggagaggagagcg
cagacgcaggctgcccccccggaggcagacagaataagggaaaagatccgtccctctgag
gagagagccggcgggggagatgcaaaccgctcccggggaagaagcaggaggaaaggaagc
gtgccgccggagtccctcagacgggcaggcaaagacatccaatcagatgagcccagtgtg
aggaaagtccggggcaggaggccgggacagggagaacgccgttttggaagaaggcaggcg
gcggtggcagccggagcggcagccgccgtcctcctgatcggaggagcagtctatgtcggc
ctgggacagaagtacagaaatgtatttttcccgggaacagagatcaacgggcttgacgtt
tccggaaaaacggtagctgaggcagagcagatgatctctgacggcatcagcgggtacacg
ctgactatcgaggagagaggagataagacagaacagctctcccaggcagatatagggctt
cgcgctgagtttgacggcacgatggaaaagattattgcctcccagaaccccctcgcctgg
ggagaatacgtattcagccccgccagctacaagattaagaccatgatggcctatgacgag
gaggcctttcagaaggcggtggaaggtctggagtgcttcgacgaggacgctccggctccg
gaagatgcccatctgtcagagtatacagagggcgaaggatactccattgtcccggaggaa
aaaggggccaaggcagtctatgaggtggtggaaaagggaatttctgatgctatcctcaat
ctgcagccaagcgtctccctggaggaaatcggcggctatgaggagccggaggtgacctct
gaggatgaaactttaataaagctctgcgacagtatgaacaaagctgccggcgttgtgatt
acataccagtttggggatgccacagagaccctgagcggagacagaatccacgaatggctg
gttccaaacgcggatggaactgtcggagtagattttggaaaggtgaacgcctatgtaaag
gagctggcagacaagtacaatacaaataataaggcaaagaatctgaaaacttcctatgga
aagacagtgacgatccgaggaggcacatacggctggaaaataaaccagtcggcggaggca
gatgagctggcagctctgatccgctcaggccagagccagagcgggcgtgagccggtttac
tctcagaaggcggccagccatggagcaaatgactatggagatacctatgtagagatcaat
ctgactgctcagcacctgttcttctataaaaatggcaagctgcttgtggagtcagacttc
gtgtcaggaaatctgtccaagggctggggcactccggcaggctcatatccgctgacatac
aagcagagggacgctgttttaaaaggagagaactaccgcactcctgtagattactggatg
ccgttcaacggcggaatcgggatgcatgacgccaaatggagatcctcctttggaggaacc
atctataagacagggggatcccacggctgcatcaatctgccccacagcgtagcgaagaaa
atatatgaaaatatttcggcgggaatgccggtgctctgctacaacctggagggaactgag
aaggcgtctgaacccgagaaaccgaaggagacccagccgtccacccaggcaccggcagag
tcgacagctccggcaccgactgaaccgtccacccagccgccggcagaatcgacagccccg
gcaccgactgaaccgtccacccaggcaccgacccagccgtctgcccaggagccggatggc
cctgcctctgacgatggaggcagcggaggagccagcggaccgggaatgtaa
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