Clostridium cf. saccharolyticum K10: CLS_39280
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Entry
CLS_39280 CDS
T02614
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLS_39280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cso02000
]
CLS_39280
Transporters [BR:
cso02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CLS_39280
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Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Na_H_antiporter
P5CR_dimer
DUF3925
Motif
Other DBs
NCBI-ProteinID:
CBK78989
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Position
complement(3764477..3765763)
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AA seq
428 aa
AA seq
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MVGFMFLIMLGLIFIGVPVAFSILGSGIWFLLATDIKPLALVCQRAVTGLDSFPLLAVPL
FVFVGDLMDRGGISKRMIRWAESLLGWMPGGLGVVTIVSCAVFAALTGSGPATVAAIGSI
MIPSLVKNGYPLKTAAGMAAAGGALGPIIPPSIPMIIYGVTMGISIPQMFVAGIVPGLFL
AALLIVVNMIIAIRNPEILRHRGTAFSIREVLKNTWSAMGALLLPVIILGGIYSGIFTPT
ESAAVGVVYALFVGIFVYREIRISDIPKALVKSMETAAMVDIIIAAANLLSWIMSVTQVS
TYIIGVLSGIITNKYTYLLVLMVLLFVVGALMDTVAAIIIIAPVIVPMGIELGLDPLHLG
MIFVINLVIGYVTPPFGYNLFTAGSVTGLKFNDVVKGVLPFLLIEMAAVMVFAYVPGIIT
WLPEVLGS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtaggatttatgtttcttataatgttggggctgattttcataggtgttccggtcgca
ttttccattcttggctccggcatctggtttcttctggcaacggatataaagcctctggcg
ctggtatgtcagcgggctgttacgggacttgattccttccctcttctcgccgtccccctg
tttgtattcgtcggagatctgatggatcgagggggaatctccaagaggatgatccggtgg
gcggaaagccttctgggatggatgcctggaggactcggagtggttacaattgtatcctgc
gcagtgtttgcagcccttacaggttcagggccggcgaccgtggcggccattggaagcatt
atgattccgtccctggtaaaaaatggatatcccctcaagacagcggcggggatggcagcg
gcaggcggggcgctggggccgattattccgcccagcattcccatgatcatctatggagtt
accatgggaatttctatccctcagatgtttgtggcagggattgtccccggacttttcttg
gctgcgctgctgattgtggtgaacatgatcatagcaatcagaaatcctgaaattctgagg
cacaggggaactgccttttcaatcagagaggttctgaaaaatacctggtccgccatggga
gcccttctgcttccggtcattattctcggaggaatttacagcggaatttttacacctact
gaatcggcggccgtaggcgtggtctatgcgctttttgtgggaatttttgtatacagggaa
attcggatttccgatattcccaaggccctggtaaagtccatggaaactgcggccatggtt
gatattattatcgcagccgccaatcttttatcatggattatgtcggtaacacaggtttcc
acatatattataggagttctgtccggcattatcacaaacaagtatacgtatcttttagtg
ctgatggttctgctgtttgtggtaggcgcgctcatggatactgtggctgccattatcatc
attgcgccggtgattgtccctatgggaatcgagcttggccttgatccccttcatctggga
atgattttcgtaattaacctggtaatcggctatgtgactccgccatttggttacaacctt
tttacagccggctcagtgacgggactgaaatttaacgatgtcgtaaagggtgttctgcca
tttctgctgatagaaatggcagcagtgatggtatttgcctatgtgccgggaattataacc
tggcttcctgaagttttgggttcctga
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