Cytobacillus solani: LIS82_04620
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Entry
LIS82_04620 CDS
T08360
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
csoa
Cytobacillus solani
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csoa03000
]
LIS82_04620
Transcription factors [BR:
csoa03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LIS82_04620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
KorB
Sigma70_r4
TetR_N
Phage_CI_repr
HTH_37
HTH_35
PIN_10
HTH_IclR
Cullin_binding
HTH_10
MarR
HTH_5
HTH_DeoR
AprA_N
Motif
Other DBs
NCBI-ProteinID:
USK55819
LinkDB
All DBs
Position
complement(880852..881175)
Genome browser
AA seq
107 aa
AA seq
DB search
MIGERVKLLRKEKKMSLSELAEQAGVAKSYLSSLERNLQTNPSIQFLEKIAAVLNVPVDH
LIHEQPNKEELDSEWMKIVQEAMNSGVTKDQFREFLAFNKWRIDQNK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgaacgagttaaactacttcgaaaggaaaagaaaatgtcgttatccgagctt
gccgaacaagctggtgtggccaaatcctatttaagttctctcgaaagaaacttacaaaca
aacccttcgattcaatttctcgagaaaatcgctgcagtattaaatgtacctgtcgatcat
ttaattcatgaacagccgaataaagaagaattggactctgaatggatgaaaattgtacag
gaagccatgaattctggcgttactaaagaccaatttagagaattcttagcatttaataaa
tggcgaattgaccaaaataaataa
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