Cytobacillus solani: LIS82_06200
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Entry
LIS82_06200 CDS
T08360
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
csoa
Cytobacillus solani
Pathway
csoa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LIS82_06200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csoa02000
]
LIS82_06200
01504 Antimicrobial resistance genes [BR:
csoa01504
]
LIS82_06200
Transporters [BR:
csoa02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LIS82_06200
Antimicrobial resistance genes [BR:
csoa01504
]
Gene variants
Macrolide resistance genes
Transporters
LIS82_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
KAP_NTPase
RsgA_GTPase
Dynamin_N
MMR_HSR1
ABC_tran_Xtn
AAA_15
Motif
Other DBs
NCBI-ProteinID:
USK56082
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All DBs
Position
1181965..1183443
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AA seq
492 aa
AA seq
DB search
MSMIKVQDLTFSYPGSFDNIFEGVNFQIDTDWKLGFIGRNGRGKTTFFNLLLGNYEYSGN
IISSVEFNYFPYPVSDKNKYTHEILEEICPQAEDWEFLREISYLNVDAEVMYRPFNTLSN
GEQTKVLLAALFLNEGQFLLIDEPTNHLDTDARKVVSEYLRKKKGFILISHDRIFLDGCV
DHILSINRANIEVQSGNYSSWKLNFDRQQEHEEATNQRLQKDIGRLKQSSKRSAGWSSQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNLESRQQKAIEEKSKLLKNMEKTESLKLE
PLEFQSNELIVLADVAVKYDDQVVNKPISFNVEHGDRIVLDGKNGSGKSSILKLILGNPI
QHTGTINLGSDLIISYVQQDTSHLKGLLSDFIELHEIDETLFKSILRKMDFDRIQFEKDI
SHYSGGQKKKLLIAKSLCEKAHLYIWDEPLNFIDIYSRMQIEELIQSFNPTMVFVEHDQA
FQQTVATKMISM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgataaaagttcaagacttaactttttcttacccaggtagctttgacaatatt
tttgaaggtgtaaactttcaaatagatacggattggaaacttggatttatcggtagaaat
ggacgagggaagactacattttttaatttattattaggtaattatgagtatagtgggaat
atcatttcatcggtagaatttaattatttcccttatccagtttcggataaaaacaagtat
acacatgaaatcttagaagaaatttgtccccaagcagaagattgggagtttctccgtgaa
atatcctatctaaatgttgatgctgaggttatgtaccgaccatttaatacattatcaaat
ggagaacaaacaaaggtgctgcttgctgcactttttttgaatgagggtcaatttctattg
attgatgagccaaccaatcatctagacactgatgctcgaaaggtggtctctgagtatcta
cgtaagaaaaaagggtttattttaatttcacatgacagaatctttttagatggatgtgtg
gaccatattttatctataaatagagcaaatattgaagtgcaaagtggcaactattcttct
tggaagctaaattttgatagacaacaagaacacgaagaggcaacaaatcagcgtttgcaa
aaagacattgggagattaaaacaatcttcaaagcgatcagctggttggtctagtcaagta
gaagcatctaaaaatgggacaacaaattcgggttctaagctggacaagggttttgtagga
cataaagcggcaaagatgatgaagagagcaaagaaccttgaatcaaggcaacaaaaagcg
attgaggaaaagtcaaaactgctaaaaaatatggaaaaaaccgagtcattaaaattagag
ccattggaatttcagtcaaatgaattgattgttttggctgatgtggctgttaagtacgat
gaccaagtagtaaataagccaattagctttaacgttgaacatggtgaccgaattgtactt
gatggaaagaacggaagcggaaaaagtagtattctaaaactaattctaggaaatcccata
cagcatacaggcacaattaatttaggttcagacctcattatctcctatgtccaacaagat
acttctcatttgaagggactgttatcggactttattgaattgcatgagattgatgaaacg
ttatttaaatccattctacgcaagatggattttgaccgaattcaatttgagaaagatata
tctcattattctggtggacaaaagaaaaagctgcttatagccaaaagtttatgtgaaaaa
gctcatttatatatttgggatgaaccgttaaattttattgatatttattcgcgcatgcag
attgaagagcttattcaaagttttaatcccacaatggtttttgttgagcatgatcaggca
tttcagcagacagttgcaacaaaaatgatatctatgtag
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