Cytobacillus solani: LIS82_09075
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Entry
LIS82_09075 CDS
T08360
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csoa
Cytobacillus solani
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csoa03400
]
LIS82_09075 (addB)
Enzymes [BR:
csoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIS82_09075 (addB)
DNA repair and recombination proteins [BR:
csoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LIS82_09075 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF7658
RIN1
TACC_C
Motif
Other DBs
NCBI-ProteinID:
USK56603
LinkDB
All DBs
Position
1709453..1712941
Genome browser
AA seq
1162 aa
AA seq
DB search
MSVRLIIGRSGSGKTEFCLNEIRDELRIAPEGDPIIYLVPEQMTFQSEYKLITTPDLGGM
IRSQVYSFTRLAWRILQDTGGMNRYHLNSVGISMLIRKIIEEKKDELRLFQRAADKNGFV
QQMEQMMTEFKRYCIQPEELAEKQAQLSSGGKTNKALQDKLHDLELIYQSFEDSLFGKYV
DSEDYFRLFIEKAADSDYLKKAVVYIDGFHSFTPQEYLIIEQLMKLCKKVTISLTLDQPF
THTPPHELHLFRMSGENCQTLYEMAVRNGLEIKETFLTEPKRWVDTSLAHLEANFDTRPA
VSYKGEAAIHIGQAVNRRAEIEGVARHINQLVRTKGYRYRDMAILTRNVQDYNDMIETIF
TDYEIPFFIDQKRTMLNHPLVEFIRSSLEIINGNWRYEPIFRAVKTELLFPVKLEASVLR
EQMDRLENYVLAYGIQGDRWTRKNRWSYRRIRGLEFEAIAQTDSEKKTEQELNDFREMIT
SPLLRLTRRLKKAETGRQYCEALYLLLEELDVPAKLEAWQGYEEERGNLIKAREHGQAWN
AIMELLDQYVEMIGEETVTTKRFAEVLDAGMESMRFTLVPPAMDQVMVADLERSRLSNIK
AAFVIGLNEGVLPAKFSEEGVFADEDREQLLSIGLKIAYGSRTKLLDEEFLAYKAFVTPS
ESLYISYPLANEEGKALIPSSYIKRMSDIFPNVNQHFYMADPAELPELEQLHYASNKNTA
LSYLTSQLQLKKQNYPIYDFWWDIYNYYLENDSLRRPALKVLSSLNYENRTSRLDEKISM
DLYGDHIQASVSRMELFSSCPFSHYVQHGLKLRERQVFRLEAPDIGDLFHAALKYIAETV
IKDNQSWTDITREQCEILAKEAVEMLAPKLQNEILLSSNRHFYIKRKLEQIISRASFILS
EHARSSGFSPIGLELGFGPKGDLPSLAFPLKNGTKMELVGRIDRVDKAQDDHGVFLRVID
YKSSSKDLNINEVYYGISLQMLTYLDIIIAHSKELIGVEADPAGVLYFHVHNPMISTSKM
LTLEDIEQEIFKKFKMNGLLLGDEKVIKLMDQTLDKGDSPIISAGFNKDGSISKRSKIAS
KQEFDYLRKFVRSKYTETGNRITSGQVDIAPYKMKEKTPCTFCSYKSVCQFDESLESNEY
RLLIPHQKDELINIIKKEVDGQ
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttcgcttaataattggacgctcaggcagcgggaaaacagaattctgcttgaat
gaaattcgtgatgaattgagaatagcacctgagggtgacccaatcatatatttagttcct
gaacaaatgacatttcaatctgaatataaattaattacaacacctgacttaggcgggatg
attaggagccaggtatattcttttacccggctggcttggcgaattcttcaagacacgggt
ggaatgaatcgatatcacttaaatagcgttgggatcagcatgctgattcgaaaaataatt
gaagagaaaaaagatgaactaaggttattccagcgtgcagccgataaaaatggctttgtt
cagcaaatggaacaaatgatgacagagtttaagcgctattgtattcagccagaagagctt
gccgagaaacaggcgcaattatcctctggagggaaaacgaataaggcacttcaagataag
ttgcatgatcttgagttaatctatcaatcattcgaagattctctttttggtaaatacgta
gattcagaggattatttccgtttattcatagagaaagcagctgactccgattatttgaaa
aaggcagtcgtgtatattgatgggttccatagcttcaccccacaggaatatttgatcata
gagcagttaatgaagctttgtaaaaaggtaacgatatctcttactcttgatcagcctttt
acacatactcctccacatgaacttcatctatttcgcatgtcaggagaaaactgtcagaca
ctatatgaaatggcggtccgaaatggccttgaaataaaagaaacgtttctaacagagccg
aaaagatgggtagacacctctttggcacatcttgaagcgaattttgatactcgccctgca
gttagctataagggagaagcggcaattcatattggacaggcagtgaatagaagagcagaa
atagaaggcgtggcaagacatattaatcagttggttcgtacaaaaggctatcggtataga
gatatggccattcttacaaggaatgtacaagattataatgacatgattgaaacgatcttt
actgattatgaaattccctttttcattgaccaaaagaggacgatgctcaatcatccactg
gtagaatttattcgttcaagtcttgagattattaatgggaattggcgatacgagccgatt
ttcagagcagtaaagacggagttattgtttccagttaaattagaagcaagtgtgttgcgt
gaacaaatggatcgacttgaaaattacgttcttgcctatggaatccaaggggatcgatgg
acgaggaaaaatagatggagctaccgcaggattagagggctggaatttgaagccatcgcg
cagacggatagtgaaaagaaaacggagcaggagctcaatgattttcgggaaatgattacg
tcgcccttattgagactcacgcggcgtttgaagaaggcagaaacgggacggcaatattgt
gaagcgctttacttgcttctggaagagttagatgttcctgctaaattagaagcatggcaa
ggatatgaggaagagcgcgggaacctcattaaagctagagaacatggacaggcatggaat
gcgattatggagcttcttgatcaatatgtagaaatgattggagaggaaactgtaacgact
aagaggtttgcagaagtacttgatgccgggatggaatccatgcgcttcaccttagttcct
cctgctatggaccaagtaatggttgcagatttagaaaggtcgcggctttcaaatataaag
gctgcatttgttattggtctgaatgaaggtgtccttcctgcaaaattttcggaggaaggt
gtatttgctgatgaggacagggaacagcttctgtcaatcggtctgaaaattgcttacgga
agccgaacgaagctgcttgatgaagaatttcttgcctataaagcatttgtgacaccgtca
gaatcgctttacatcagctatccgcttgctaatgaagaagggaaagcgttgattccatct
tcttatattaagcgaatgagcgatatttttccaaatgtaaaccagcatttttatatggca
gatccagctgaacttccggagctggagcagctgcattacgcttcaaataaaaatactgca
ctatcttatttaacatctcaattgcagctgaaaaagcaaaattatccaatctatgatttt
tggtgggatatttataattattatttggaaaatgatagcttgcgaagacctgctcttaag
gtcctttccagcttgaattatgagaatcggacaagccggctggatgaaaaaatcagcatg
gatttatatggggatcacattcaggcaagtgtatccagaatggagcttttttctagctgt
ccattctcgcactatgttcagcatgggctgaagttaagggagcgtcaggttttccgtcta
gaagcgcctgatattggcgatttattccatgcagccttaaaatatattgccgaaacggta
ataaaagataatcaatcatggacggatataacaagagaacaatgtgaaattctagcaaaa
gaagcagtcgaaatgctggcgccaaaattgcagaatgaaatattgctaagctcaaaccgc
catttttatataaaaagaaaactagagcaaattataagcagagcctcatttattctgagt
gagcacgctagatcaagcggattttctcccattggtctggagcttggatttggtccgaag
ggggatcttccatcgcttgccttcccgctgaaaaatgggacgaagatggagcttgtaggc
aggattgaccgtgtcgataaggcacaggatgatcatggtgtattcttgcgagtcattgat
tataaatccagttcaaaggatttaaatataaatgaagtttactatggaatttctctccaa
atgcttacgtatttggatattatcattgctcattctaaagaactgatcggtgtagaggcg
gatccagccggtgtcttgtattttcatgttcataatccgatgatcagcacatcaaaaatg
ctgacacttgaggatattgaacaggaaatttttaaaaagtttaaaatgaatgggctcttg
cttggcgatgagaaggtaatcaaattaatggaccaaacgcttgataaaggagattcacca
attatatctgcaggctttaataaggatggatcgatttctaaacgttcgaagatagcaagc
aaacaagaatttgattatttgcgtaagtttgtccgcagcaagtatacggaaactggaaat
cgtattacaagtggacaagtggatatcgcaccttacaaaatgaaagagaaaaccccttgt
acattttgttcgtataaatcggtttgtcaatttgatgaatcgctggaatcaaatgaatat
cgcctgctaatcccacatcaaaaggatgaactcattaacataattaaaaaggaggtggat
ggacaatga
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