Cytobacillus solani: LIS82_11180
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Entry
LIS82_11180 CDS
T08360
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csoa
Cytobacillus solani
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csoa03032
]
LIS82_11180 (topA)
03400 DNA repair and recombination proteins [BR:
csoa03400
]
LIS82_11180 (topA)
Enzymes [BR:
csoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LIS82_11180 (topA)
DNA replication proteins [BR:
csoa03032
]
Prokaryotic type
DNA Topoisomerases
LIS82_11180 (topA)
DNA repair and recombination proteins [BR:
csoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LIS82_11180 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
USK57000
LinkDB
All DBs
Position
2121707..2123782
Genome browser
AA seq
691 aa
AA seq
DB search
MSEFLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPKSQMGVDVEKQFEPKYITIRGK
GPILKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLNMDVTSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRLLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIKAFVPEEYWSIEGDFLKRKESFEANFYGIGNEKLELHSKEEVDRVLSKMKGNEFQVSS
VTKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRVSEIAQAEATQFIEHSYGKEYLSTEKKKEKKKSNTQDAHEAIRPTSIMKEPNSLK
EYLSRDQLRLYRLIWERFVASQMSAAIMDTMSVDLKNEDVLFRATGSKVKFPGFMKVYVE
GTDDSSEEKDKMLPDLQEGDIVLKKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTF
APTLDTIQKRGYVGLDNKRFVPTELGEIVLELILEFFPDILDVEFTAKMEKDLDHIEEGK
VNWVQIIDDFYGDFEKHLKIAEKEMQEVEIKDEPAGEDCEQCGNPMVFKMGRYGKFMACS
NFPDCRNTKAIVKEVGVKCPSCKEGNIIERKSKKRRIFYGCDRFPECDFISWDKPLPRSC
PKCENLLVEKKLKKGVQVQCVECDYKEEKQG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttcttgtaatcgttgagtcgccagcaaaggcaaaaacgattgagcgttat
cttgggaaaaaatataaagtaaaagcatctatgggccatattagagatttaccaaaaagc
caaatgggtgtcgacgtagaaaaacaatttgagccaaagtatataactatacgcggaaaa
ggcccaattttaaaagaattaaagactgctgcgaaaaaagctaagaaaatctatcttgca
gccgaccctgatcgtgaaggggaggcaattgcatggcatttagcccatagcttaaatatg
gatgttacatcggattgccgtgtagtttttaatgaaattacaaaggatgccattaaagaa
tcttttaagcatcctcggccgataaacatggatcttgtcgatgcacaacaggccagaaga
ctactcgaccgccttgttggttacaatattagtcctttactatggaagaaagtcaagaaa
ggtttaagtgctgggagagttcagtctgttgctgttcgattaattattgacagggagaag
gaaattaaagcatttgttcctgaagaatattggtccattgaaggtgactttctaaagaga
aaggaaagctttgaagcgaacttttacgggatcgggaatgaaaagcttgaattacattcg
aaggaagaagttgatcgtgtcctcagcaagatgaagggaaacgaattccaagtttcatct
gtcactaaaaaagagcgaaagcgaaaccctgccgcaccgtttactacttcatccttacag
caggaagctgcacgaaaattaaatttccgtgcgaagaaaacgatgatgcttgcacagcag
ctttatgaagggattgaccttggcaaggaaggaacggttggtctgatcacttatatgcga
acagattctacccgtgtatcagaaatcgcccaggcggaggcaacacaatttattgaacat
tcatacggaaaagagtacttatcaactgaaaagaaaaaagaaaagaaaaagtcaaatact
caggatgctcatgaggctatccgtccaactagtataatgaaagaaccgaatagcttaaaa
gaatatttatcaagggatcaactgcggctttatcgattaatatgggagcgttttgttgca
agccaaatgtctgctgcgattatggatacaatgagtgttgatttgaaaaatgaagatgtt
cttttccgtgcgacaggatcaaaagtaaagttccctgggttcatgaaggtatatgtagaa
ggaacggatgattcatctgaagaaaaggataaaatgctccctgatctccaagaaggggat
attgtgttaaagaaagatatcgagcctaagcagcattttactcagccgccaccaagatat
acggaagcaaggctagtgaaaacgttagaagagcttggaatagggcgaccgtctacattt
gctccaactttggatacaatacaaaagcgcggttatgtaggattggataataaaaggttc
gttcctacagaactaggagaaatcgttttagaactaattctagagtttttcccagatata
cttgatgtcgagtttacagctaaaatggaaaaggatcttgaccatattgaagaaggaaaa
gtcaattgggtacagattatcgatgacttttacggagatttcgaaaagcatttaaaaatt
gcagaaaaagaaatgcaggaagtagaaataaaggatgagccagctggcgaagattgtgaa
cagtgtggaaatccaatggtatttaaaatgggccgatatgggaagtttatggcgtgcagt
aattttccagattgccgaaatacgaaagccattgttaaagaggttggagtaaagtgcccg
agctgtaaagaaggaaatataatagagagaaaaagtaagaaacgccggattttttatggg
tgtgatcgattccctgaatgtgattttatttcttgggacaaacctttgccgcgtagctgt
ccaaaatgcgagaaccttcttgtggaaaagaagctgaaaaaaggtgtccaagtacaatgt
gttgaatgtgactacaaggaagagaagcaaggttaa
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