Cytobacillus solani: LIS82_11430
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Entry
LIS82_11430 CDS
T08360
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
csoa
Cytobacillus solani
Pathway
csoa03030
DNA replication
csoa03430
Mismatch repair
csoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIS82_11430
03430 Mismatch repair
LIS82_11430
03440 Homologous recombination
LIS82_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csoa03032
]
LIS82_11430
03400 DNA repair and recombination proteins [BR:
csoa03400
]
LIS82_11430
Enzymes [BR:
csoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIS82_11430
DNA replication proteins [BR:
csoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LIS82_11430
DNA repair and recombination proteins [BR:
csoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LIS82_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
RNase_H_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
USK57048
LinkDB
All DBs
Position
2169578..2173900
Genome browser
AA seq
1440 aa
AA seq
DB search
MENALGNKERFQLLLQQLNLTDDVIVQQFQQAEINKVVIEKKAKKWHFYFNFEAILPFRY
FSLFSTQLEKTFSHIANVSFTIHVNNQQFTDQLVLDYWQYSIQEMEGMAPPLIKLLNEQI
PSVHGNKIIISVRNETEGLSIKRKYAGQISHVFETFGFPSLVIDTEISNEAANEEYQKFI
EAKEKEDQERGLQALIDMQKKEAEADSQDAAVLQGPLMIGLTIKDDADFRKLIDIVDEER
RVAIEGYVFAAETRELRSGRTLLTFKITDYTSSILVKMFSRDKEDAALYQHVQKGMWLKV
RGSVQNDTFVRDLVMIGNDINEIKPFQRKDTAPENEKRVELHLHTPMSQMDAVSSVSTLV
GQAKKWGHKAIAITDHAVVQSFPEAFGAGKKNDIKILYGVEVNLVDDGVPIAYNSTHRLL
SEDTYVVFDVETTGLSAVYDTIIELAAVKIRDGEIIDRFESFANPHHPLSATTINLTGIT
DDLVENAPEVEEVLKDFHEWTGDAILVAHNASFDMGFLNVGYKKINLGKAPNPVIDTLEL
ARFLYSDMKNHRLNTLAKKFDIELTQHHRAIYDAEATGYLLLKMLKDAAEKGIEYHDQFN
DNMGQGNAYQRARPYHCTLLAQTEAGLKNLFKLVSISHLNYFYRVPRIPRSQLEKYREGL
LVGSGCDKGEVFEGMMQKSPEEVEETAQFYDYIEVHPKEVYAHLLELELVRNEKALEDII
GKVVQLGEKLGLPVVATGNVHYLNPNDKIYRKILINSQGGANPLNRHKLPDVHFRTTNEM
LDAFKFLGAEKAREIVVENTNKIADMIDEIKPIKDDLYTPKIEGADDEMRNMSYNMARSI
YGEKLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATM
TEITEVNPLPPHYVCPECKHSEFFNDGSVGSGYDLPDKDCPECGATYKKDGHDIPFETFL
GFKGDKVPDIDLNFSGEYQPRAHNYTKQLFGEDYVYRAGTIGTVADKTAFGYVKAYQQDN
NLQLRGAEIDRLASGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQFPADDKNSEWKTTH
FDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGTESLGVTEE
QIMCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNRIC
TLSEVIGCRDDIMVYLIYQGLEPAFAFKIMESVRKGKGLSDEMEEEMRKNEVPEWYIDSC
KKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLLYYAAYFTVRAEDFDVDAMAKGSQAIRSL
IDDINAKGLDASNKEKNLLTVMELALEMSERGFKFKKVDLYRSSANEFIIDDGSLIPPFN
AIPGLGTNAAINIVKAREEGEFLSKEDLQQRGKLSKTIIEYLDNHGCLESLPEQNQLSLF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgccctaggcaacaaagagcgtttccaactcttgctccaacagctgaattta
acagatgatgtgattgtacagcaatttcaacaggctgaaattaataaagtagtgatagaa
aaaaaggcgaaaaaatggcacttctattttaactttgaggcaattttaccatttcgttat
tttagccttttttcaacacaattggaaaagaccttttcacacatagcgaatgtttctttt
acaattcacgtaaataatcagcagtttactgatcaattagttttagattactggcaatat
tctattcaagagatggagggaatggctcctccgcttattaagcttttaaatgaacaaatt
ccatccgtacatggaaataaaatcattatcagtgtgagaaatgaaacggaaggtttatcc
attaaaaggaaatatgcgggacaaattagtcatgtatttgaaaccttcggatttccttct
ttagtgattgatacggaaatttcaaatgaagcggcgaatgaagaatatcaaaagtttatt
gaggcgaaggaaaaagaggatcaggagcgaggacttcaggcgttaattgatatgcagaag
aaagaagccgaagctgactcacaagatgctgcagttctccaaggtccgctgatgattggt
ttaacaatcaaagatgatgcggattttcggaaactcattgatattgttgatgaagaacgc
cgtgttgcgattgaaggatatgtttttgcagctgaaacgagagagcttcgtagtggaaga
acattgctaacctttaaaataacagattatacgagctccattctagttaaaatgttttcc
cgcgacaaggaagacgcggcattatatcagcatgttcaaaaaggaatgtggctaaaagtg
cgtggcagcgtccaaaatgacacctttgttcgcgatcttgtcatgatcgggaatgatatt
aacgaaatcaagccatttcaaagaaaagacacagcccctgaaaatgaaaagcgtgtggag
ttgcatctgcatacgccgatgagtcaaatggatgcagtttcatcggttagcacactcgtt
ggacaagcaaaaaaatggggccataaggctattgcaataacagaccatgctgtcgttcaa
tcatttccagaagcatttggtgctggaaagaaaaatgatatcaagattttatatggagtt
gaagtaaatctagtagatgatggagtaccgatcgcatataacagcacacatcggttatta
agtgaggatacgtatgttgtctttgacgttgaaacaacaggtttatcagcagtatatgat
acgatcatcgaacttgcagccgtaaaaatccgcgatggagaaataattgaccgttttgaa
tcgtttgcaaatccacaccacccactctctgcaacaacgattaacttaactggtattaca
gatgatctagttgaaaatgctccagaggttgaggaagtactaaaggatttccatgaatgg
actggtgacgcgatattagtagcacataatgcatcttttgacatgggttttctcaatgtc
ggctataagaaaatcaatctaggcaaagctcctaatccagtcattgatactcttgaactt
gcgcgttttctttattcagatatgaagaaccaccgattgaatacgctcgcaaagaaattt
gatattgaattaacacagcatcaccgagcgatctatgatgcagaagcaactggttatctg
ctcttgaaaatgttaaaggatgcagctgaaaagggaattgagtatcacgatcaatttaat
gataatatgggtcagggaaatgcgtatcaacgtgcaagaccttatcattgtacattgcta
gcacaaacagaggcaggcttgaaaaatctatttaagcttgtatctatttctcaccttaat
tacttctatcgtgtaccaagaattccgaggtcccagcttgaaaaataccgtgaaggtctt
ttagtaggatctgggtgcgataagggtgaagtgtttgagggaatgatgcagaagtcacct
gaagaggtggaagagacggcacaattctatgattatattgaggttcatccgaaggaagta
tacgcacatttgttggaacttgaattagttcgaaatgaaaaagcgttggaggatattatt
ggaaaagttgtccagcttggtgaaaagttaggtctccctgttgtggcgacagggaatgtc
cattacctaaatcctaatgataaaatttacagaaaaattcttattaattcacagggtgga
gcgaatccattaaatcgccataagctcccggatgtccattttcgaacaacaaatgaaatg
ctcgatgctttcaaatttttaggagcggagaaagcacgtgaaatagttgttgagaataca
aataaaattgcagatatgatcgatgagattaaaccgattaaagatgatttatatacgcca
aaaattgaaggcgcagatgatgaaatgcgcaatatgagctataacatggctagaagcatt
tatggagaaaaattgcctgaaattgtcgaagctcgtttggaaaaggaattaaaaagtatc
attgggcatggatttgccgttatctatttgatctcacataagttagtaaaaaaatcatta
gatgatggctatctggttggttcacgtggatctgtcggttcatcacttgttgcaacaatg
acagaaataacagaggtgaatccgctcccaccacactatgtctgccctgagtgtaagcat
tcggaattcttcaatgatggttcagtcggatctggttatgatctccctgataaggattgt
ccagaatgtggtgcgacttataagaaggatgggcatgacattccatttgaaactttcctt
gggtttaaaggggataaagtacctgatatcgacttgaacttctcgggtgaatatcagccg
cgtgcacataattacacgaagcaacttttcggtgaagattacgtttatcgtgcaggaacg
ataggaactgttgccgataaaacggcatttggctatgtaaaagcgtatcagcaagataac
aatcttcaattaaggggagcagaaattgacagactcgcgtctggctgtacaggtgtcaaa
aggacgacggggcagcaccctgggggaatcattgttgttcctgattacatggatattttt
gatttctcgccgatacaattccctgctgatgataaaaattcagaatggaagaccacacat
ttcgatttccattccattcatgacaatctgctaaagcttgatatactcgggcatgatgat
ccaacagtgatccggatgcttcaagatttaagtggaatagatccgaaaacaatccctacg
gatgatccagaagtaatgaaaatatttagtgggactgagtccttaggtgtaacagaagag
caaatcatgtgtaaaacaggaacgcttggcattccggaatttggcacgagattcgtacgg
caaatgttagaggatacgaagcctactactttttcagagcttgtgcaaatctctggtctc
tcacacggtacggatgtttggctagggaatgcacaggagctcattcataatagaatatgt
actttgagtgaagtaattggctgccgtgatgatataatggtgtatttaatctatcaagga
ttggagcctgcctttgcatttaaaattatggaatctgtccgtaaaggtaaaggtttaagt
gatgagatggaagaagaaatgagaaagaatgaagtgccggaatggtatattgattcatgt
aaaaaaatcaaatatatgttccctaaggcgcatgccgctgcatatgtgttaatggccgtt
cggattgcttattttaaggttcatcacccgcttctatattatgctgcatattttactgtt
cgtgcagaggattttgatgtcgatgcaatggcaaaaggatctcaagccattcgctcatta
attgacgatattaatgcaaaagggctggatgcttctaataaggaaaagaacttactaacc
gtgatggagcttgcgcttgaaatgagtgagcgtggatttaaatttaagaaggtagatctc
tatcgatcgagtgcaaatgaatttattattgatgatgggtcgctaatcccaccatttaat
gcgattcctggacttggcacaaatgcggcaatcaacatagtgaaagcaagggaagaaggc
gaattcctttcgaaggaggaccttcagcagcgcggaaagttgtcaaaaacaatcattgag
tatctggataaccatggatgcttagaatcattgccagaacaaaaccagctttccttattt
taa
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