Cytobacillus solani: LIS82_16180
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Entry
LIS82_16180 CDS
T08360
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csoa
Cytobacillus solani
Pathway
csoa00061
Fatty acid biosynthesis
csoa00071
Fatty acid degradation
csoa01100
Metabolic pathways
csoa01212
Fatty acid metabolism
csoa02024
Quorum sensing
csoa04146
Peroxisome
Module
csoa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LIS82_16180
00071 Fatty acid degradation
LIS82_16180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LIS82_16180
09145 Cellular community - prokaryotes
02024 Quorum sensing
LIS82_16180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csoa01004
]
LIS82_16180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csoa04147
]
LIS82_16180
Enzymes [BR:
csoa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LIS82_16180
Lipid biosynthesis proteins [BR:
csoa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LIS82_16180
Exosome [BR:
csoa04147
]
Exosomal proteins
Exosomal proteins of breast milk
LIS82_16180
Exosomal proteins of breast cancer cells
LIS82_16180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF4577
Motif
Other DBs
NCBI-ProteinID:
USK53149
LinkDB
All DBs
Position
complement(3096121..3098037)
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AA seq
638 aa
AA seq
DB search
MSSLNMTFPQLLLERTARAGSKVALREKDFGIWNEITYQEYLDQVKSLSLGFAKLGLKRG
DKLAIVGDNRPEWVMSELAAQALGGISVGIYQESLPNEMSFILDHCDATIVVVEDQEQVD
KMFEIKEEIPNVTKIIYYDPRGMRNYQDDALMSFEEVQALGRMLDEEDPAFFQSEVKKGS
EHDVAIFSYTSGTTGNPKATMLTYKNLLDMAKNLSTIDPLTDKDEYVSFLPLAWIGEQMM
TMGMGLYNGMTINFPEEPSTVLENLREIGPQIMFSPPRIYEDMVSRFQVKIQDAGWLKRK
IYNWCKPIGEKVARAYFENKEISFTTKLQYKIADYFMFSAIRDHLGLLGMKRAYTGGAPL
GPDVFEFFHSIGVNVKSIYGQTEVSGISIVHRDGDIKLDSVGIPIPGTEVKISDEGEILI
KSSSICKGYYKNEKSTKETIQSGWLHTGDAGRLDEEGHLYVIDRIKDVIRLNSGEMFSPN
FIENKLKFSSYIQEAVAIGKDRPYVVAMINIDMENVGRWAEKNQISYTTYTDLSSKPEVL
ALIQKQVNDINQTLPEKARVRKFVLLYKELDADDEELTRTKKVRRQFVAKKYETLIEGMY
TQEERIKVEGKIKYRDGKEQTIHTTLQVIFMDEGEGAA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttgaatatgacatttcctcaattattacttgagaggacggcaagagctggt
tcgaaagttgctttaagagaaaaagattttggtatttggaatgagattacgtatcaagaa
tatttagatcaagtaaaaagtctaagtcttggatttgcgaagcttggcttaaaaaggggc
gataaactagcaatagttggcgataatcggcctgagtgggttatgagtgaactggcagcc
caagcgttaggaggaatttcagtcggaatttatcaagaatcgctgccgaatgaaatgagc
tttattttggatcactgtgatgcaacgattgttgtggttgaagaccaagagcaggtcgat
aagatgtttgaaattaaggaagaaattccgaacgtaacaaaaattatttattatgatccg
cgtggaatgaggaattaccaggatgatgctttgatgagctttgaagaagtccaagccctc
gggagaatgcttgatgaagaagatcccgccttttttcaatcagaagtaaaaaaaggaagt
gagcatgatgtcgcgattttttcttatacatccggtacaacaggcaatccgaaagcaacc
atgcttacatataagaaccttcttgatatggcaaaaaacttatcaactattgacccgcta
acagataaggatgagtatgtatcctttttgccccttgcttggataggcgagcaaatgatg
acaatgggaatgggcctatataatggcatgacgataaacttcccagaagaaccttctacc
gttttagagaatctgcgtgaaataggacctcaaataatgtttagcccacctagaatttat
gaagatatggtttcaagatttcaagtgaaaattcaagatgccggctggctaaaaagaaag
atttacaattggtgcaagccaatcggtgaaaaggtggcaagagcctattttgaaaataaa
gaaatttcatttacaacaaagctgcaatacaaaatagccgattatttcatgtttagtgcg
ataagggatcacttaggcttgctcggcatgaagcgtgcatatactggtggtgctcctctt
ggaccggatgtttttgaatttttccatagcattggtgtaaatgtgaagagtatttatggg
caaacagaagtatctggtatttcgattgttcatcgtgatggggatataaagctggatagt
gttggcatcccgatccctgggacagaagtgaaaatttcagatgaaggagaaatactcatc
aagagctcaagtatttgcaaaggctattataaaaatgaaaaatcaacgaaggaaacaata
caatctgggtggctgcatactggagatgctggcagattggatgaagaagggcatctctat
gtcatcgaccggataaaggatgtcattcgcttgaattcaggggaaatgttttcaccgaac
tttattgaaaataaactgaaatttagttcgtatatccaagaggctgtagctattggcaag
gatcgaccatatgtcgtagctatgataaatatagacatggaaaatgtcggcagatgggcg
gagaaaaatcaaattagttatacaacctatacagatctgtcctcgaagccggaagtgttg
gcgttaattcagaaacaagtgaatgatattaatcaaacattgccagagaaagctcgggta
agaaaattcgttcttctttataaagagcttgatgcagatgatgaagagctgacaagaaca
aagaaggtaagaagacaatttgttgcaaaaaaatatgagacgcttatcgaagggatgtat
acacaagaagaacggataaaggttgaaggaaaaattaagtatcgtgatggaaaggaacaa
acgattcatacaacacttcaggtgatctttatggatgaaggagagggagctgcataa
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