Cytobacillus solani: LIS82_19965
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Entry
LIS82_19965 CDS
T08360
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
csoa
Cytobacillus solani
Pathway
csoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LIS82_19965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csoa03400
]
LIS82_19965
Enzymes [BR:
csoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LIS82_19965
DNA repair and recombination proteins [BR:
csoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIS82_19965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_12
HHH_5
nSTAND3
AAA_22
T2SSE
NPHP3_N
UvrD_C
AAA_28
AAA_16
AAA
NTPase_1
DUF4926
AAA_17
TsaE
Motif
Other DBs
NCBI-ProteinID:
USK53864
LinkDB
All DBs
Position
complement(3815657..3818065)
Genome browser
AA seq
802 aa
AA seq
DB search
MEKQDSLDLFSEQGKYIKGKHLVTIFHNEQNLYTVLRIRVEETNDQYEDKEAVVTGYFPK
MHEQETYIFYGELKDHPKFGVQFQANHFRKDIPQTKQGVVNYLSSELFKGIGKKTAESIV
ETLGENAISRILNQPSLLDQIPKLAPEKAKTLYDTLMEHQGLEQAMIALNQYGFGPQLSM
KIYQAYKDQTVEVVQNNPYKLVEDIEGIGFGRADELGYQLGISGSHPDRIRAACLYILET
ESMQAGHVYTEARVLLPSVKRLLEENKRDGIEFESISNEIVKLGEEGKIMIEEQRLYVPS
LYFSEKGLVTNIKRVLRQTQYEDQFPESEFLLALGKLEERLKVQYAPTQKDAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYADLHGCSLDPKDYKKEEPFPFILAAPTGRAAKRMTES
TGLPALTIHRLLGWNGTEGFDRHEENPLEGKIIIVDETSMVDIWLANQLFKAIPENMQVI
LVGDEDQLPSVGPGQVLKDLLSSERIPTVKLTDIYRQAEGSSIIELAHEMKKGRLPANIS
AQQADRSFIQCNPGQIAAAIEKVVLNAKKKGYTAKDIQVLAPMYKGPAGIDRLNEIIQEI
FNPNDGSRKELAFGDVKYRIGDKVLQLVNQPENHVFNGDMGEIVSIFYAKENTEKQDMVV
VSFDGAEATYTRQDLTQITHAYCCSVHKSQGSEFPIVILPVVKSYFRMLRRNLLYTAITR
SKQFLILCGEEEALRIGVERADEQSRLTSLTDKLKEAISEQIPAEKEFDGESLTYEEEIM
NVDPLIGMENITPYDFMEIDNT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaggactccttagacttgttttccgaacaaggaaaatacataaagggaaag
catcttgtaaccatctttcataatgagcaaaacctatacaccgttttgcgtattcgggta
gaggaaacgaatgatcagtatgaggataaggaagcagtggtaactggatattttccgaag
atgcatgaacaggaaacgtatattttttatggggaattgaaagatcacccgaaatttgga
gtccagtttcaggccaatcattttcgtaaggatatccctcagacgaaacaaggtgttgtc
aattatttatcaagcgagctgtttaaaggtattggaaaaaagacggctgaaagcatcgtt
gaaacattaggggaaaatgcgatatcaagaattctaaaccagccatccttgcttgatcaa
attccaaaacttgctccggaaaaagcaaaaaccttatatgatacattaatggagcatcaa
ggccttgaacaggcaatgatcgctttaaatcaatatgggtttggtccacagctttccatg
aagatttatcaagcttataaagatcaaacggttgaggttgttcaaaataatccgtataag
ctcgtcgaggatattgaaggaattggttttggcagagcggatgaactaggctatcagctt
gggatttcagggagccatccagatcgcattagagcggcttgcttatacatacttgaaacg
gaaagcatgcaggccgggcatgtgtacacagaggcaagagtgctattgcctagtgtaaaa
aggcttcttgaagaaaataaacgtgatggtattgagttcgaaagcatttctaatgaaatt
gtaaagcttggggaagaaggaaaaataatgatcgaagagcaacgattgtatgtgccttcc
ctttatttttctgaaaaaggactagtaaccaacataaagcgggtattaaggcaaacacaa
tatgaagatcagtttcctgagtcagaatttctgcttgcattaggaaaactagaagagcga
ttgaaggtacagtatgcgccgactcaaaaagatgccatccaaacggctttaatgtcgcct
atgctaatattaacaggtggtccaggtacgggaaagacaacagttattaaagggattgtt
gagttatatgcggacttgcatggctgctcattagacccgaaggattataaaaaggaagaa
ccttttccgtttatcttagcagctccgactggtcgagccgccaaaagaatgacggagtca
acaggcttgcctgccttaacgattcatagacttcttggatggaatgggacagaaggattt
gatcggcacgaagaaaatccattagagggtaaaattatcattgttgatgaaacatccatg
gttgatatttggcttgccaatcagctctttaaagcaattccggaaaatatgcaagtcatt
ttagtaggggatgaggatcagctgccttcagttggtcctgggcaggtgttaaaggactta
cttagttcagaacgaatcccaacggttaaattaacggatatttacaggcaggcagaaggt
tcatccattattgagcttgcacatgaaatgaaaaaaggcaggctcccagcgaatatttct
gcccagcaggctgatcgttcctttattcaatgcaatcctggacaaatagcagctgcgatc
gaaaaagtagttttaaatgcaaagaaaaagggttatacagcaaaggatattcaagtgcta
gcaccgatgtataagggacctgctggaattgatcgtttaaatgaaatcatccaggaaatt
tttaatccaaatgacggatcgcgaaaagaattagctttcggtgacgtaaaataccgaatt
ggtgataaagttcttcaactagtgaatcagccagaaaatcatgtttttaatggcgatatg
ggtgaaattgtttcgattttttatgcgaaagagaacacggagaaacaagacatggttgtc
gtgtcttttgacggtgccgaagcaacctatactcgtcaggatttaactcaaattacccac
gcgtattgctgctctgtacataaatcgcagggaagtgaattccctattgtgattcttccc
gttgtgaagagttattttcgaatgctgcgaagaaacttgctttataccgccatcacacgc
agtaagcagtttcttatcctatgtggggaagaagaagcattgaggataggtgtcgaaaga
gcagacgagcaatcccgattaacaagtcttactgataaacttaaagaagcgatttcagaa
caaattcccgcagaaaaagaatttgatggtgaatctttaacttatgaagaggaaataatg
aatgttgacccgttaatcgggatggaaaatataacgccgtatgattttatggaaatagat
aatacctaa
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