Cytobacillus solani: LIS82_20810
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Entry
LIS82_20810 CDS
T08360
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csoa
Cytobacillus solani
Pathway
csoa03030
DNA replication
csoa03410
Base excision repair
csoa03420
Nucleotide excision repair
csoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIS82_20810 (polA)
03410 Base excision repair
LIS82_20810 (polA)
03420 Nucleotide excision repair
LIS82_20810 (polA)
03440 Homologous recombination
LIS82_20810 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csoa03032
]
LIS82_20810 (polA)
03400 DNA repair and recombination proteins [BR:
csoa03400
]
LIS82_20810 (polA)
Enzymes [BR:
csoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIS82_20810 (polA)
DNA replication proteins [BR:
csoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LIS82_20810 (polA)
DNA repair and recombination proteins [BR:
csoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LIS82_20810 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIS82_20810 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
USK54018
LinkDB
All DBs
Position
complement(3993976..3996606)
Genome browser
AA seq
876 aa
AA seq
DB search
MKKKLVLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTMMLNRILEDEKPTHLLVAFDA
GKTTFRHKTFSEYKGGRQKTPPELSEQFPFIRELLDAYGISRYELENYEADDIIGTLSLH
AENDDFEVKIISGDKDLTQLSSEKTTVSITRKGITEIEDYTPAYIQEKYGITPDRIIDMK
GLMGDASDNIPGVPGVGEKTALKLLKEFGALETVLSSVDKVGGNKLKEKLEEFKDQALMS
KELATITREAPIEIELSEVEYEGYERDKVVSIYKELGFNSLLDKLSGETGSEEVELEEIE
FEVINEITEDIFSGENAFYIELLEDNYHYADIIGFSIANDKGTFFISTEKALASQVFKQW
AEDASKEKIVYDAKRSEVSLRHHGIHLAGVSFDLLIASYLINPSATIEDVASVAKSHGYE
SIQSDEAFYGKGAKRQVPEEGMLAMHLARKAAAIEALKDKLDKELKDNQQAELFYELEMP
LSLILADMESCGVKMDLKRLKAMGEEIYSKLVGIESRIHELAGEKFNINSPKQLGVILFE
KLGLPVYKKTKTGYSTSADVLEKLETKHEIVREILDYRQLGKLQSTYIEGLLKIVNKDNE
KVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWVIFAADYSQIELR
VLAHIAKDDKLIEAFNHDMDIHTKTAMEVFHVSEENVTSNMRRHAKAVNFGIVYGISDYG
LSQSLGITRKEAGQFIERYLESYPGVKAYMEDIVADAKQKGYVSTLLHRRRYLPEITSRN
FNLRSFAERTAMNTPIQGSAADIIKKAMIDMAERLKSENLKTRLLLQVHDELIFEAPKDE
LDILKKIVPEVMENAVVLEVPLKVDYAYGPTWFDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaagcttgttttaattgacggcaacagcattgcttaccgtgctttttttgcc
ttgcctcttctaaacaatgacaaagggattcatacgaacgcagtttatgggtttacaatg
atgctcaatcgaattcttgaggatgaaaagcctacccatctattagttgcatttgatgca
gggaagacaacatttcgtcataagacatttagtgaatataaaggagggagacaaaagacg
ccaccagaactatccgagcagtttccctttattcgtgagctgttggatgcttatggaatc
tcacgttatgaattagaaaattatgaagcagatgatattatcggtacgctctccctccat
gcagaaaatgatgactttgaagtgaagataatttctggtgataaagatctcacgcaatta
agctctgaaaaaacaacggtttcgatcactcgtaaagggattacagagattgaagattat
actccagcctacattcaagaaaaatatggaattacaccggatcgaattattgatatgaag
ggtcttatgggggatgcttcggataatatccctggtgtgccaggtgttggtgaaaagacg
gcactaaaattgcttaaggaatttggagcacttgagacggttttatcttctgttgacaaa
gttggcggaaataaattgaaggaaaagctggaggaatttaaagatcaggccttaatgagt
aaggaattagcgacgattacgagggaagcacctatagaaatcgagctaagtgaagtggaa
tacgaaggatatgaaagagacaaggtagtcagcatttataaagaactaggctttaattca
ttattggacaaacttagcggtgaaacaggatcagaagaagttgaacttgaagaaattgag
tttgaagtgattaatgagataacagaagatattttttcaggtgagaatgctttttatatt
gaattgcttgaagataattatcattatgcagatattatcggcttttcaattgctaatgat
aaaggaaccttttttatttccacagagaaagcattagcttcacaagtttttaaacaatgg
gcagaggatgcaagtaaagaaaaaattgtctatgatgcgaaaaggtcggaggtatcgctt
cgccatcatggcattcatttagcgggagtgagctttgatctgctaattgcttcctatcta
attaacccatcagcaacaatagaggatgttgcctccgttgcaaaaagccatggctatgaa
tccattcaatcggatgaagcgttctatggaaaaggagctaaaagacaggttcccgaagaa
ggcatgttagctatgcaccttgcaagaaaagcggctgcaatagaagcgctgaaagataag
cttgataaggaactgaaggataatcagcaggcagagttattttatgaattagaaatgcct
ttatcattaattcttgcagatatggaatcctgtggggtaaaaatggatcttaaacgttta
aaagccatgggagaagagatttactcaaaattagtaggaattgagagccgtatacatgaa
ttagctggagaaaagtttaatatcaactcaccgaaacagctaggggttattcttttcgaa
aagctggggcttcctgtttataaaaagacaaagacgggttattcaacctcagcggatgta
ctagagaagcttgagacgaagcatgaaatcgttagagaaatcctcgattatcgtcagctt
ggaaagcttcagtccacatatatcgagggcttgcttaaaattgtcaacaaggacaatgaa
aaagtgcacacaagatttaatcaggctttaacacaaacaggaagacttagctcaacagat
ccaaatcttcagaatatccctatccgtctagaagaaggaagaaaaataagacaggcattt
atcccttctgaaaaagactgggtcatctttgctgctgattattctcaaattgagcttcgg
gtgcttgcacatattgcgaaggatgataagctaattgaggcatttaatcacgatatggac
atccatacaaaaactgcgatggaagtgtttcatgttagtgaagagaacgttacttccaat
atgcgccgccatgcaaaagcagttaactttggcattgtgtacggtattagtgattatgga
ttatcccaaagtcttggaattacccgaaaagaagcaggtcaatttattgaacggtattta
gaaagctatccaggggtcaaagcgtatatggaagatattgttgccgatgccaagcaaaaa
ggatatgtttcaaccctacttcatcgcagaagatatcttcctgaaatcacaagccgtaat
tttaatctgcgcagctttgcagaacgcacagcgatgaatacgccaatccaaggaagtgca
gcagatattataaaaaaagcaatgatagatatggcagaacgtttgaaaagtgaaaactta
aaaacacgtttgcttttacaggtacatgatgaattgatctttgaagcaccaaaggatgaa
ttagatattttgaaaaaaattgtccctgaggtgatggaaaatgcagttgtgcttgaggtt
ccgctcaaagttgattacgcttatggaccaacatggtttgatgcaaaataa
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