KEGG   Cytobacillus solani: LIS82_24035
Entry
LIS82_24035       CDS       T08360                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
csoa  Cytobacillus solani
Pathway
csoa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LIS82_24035 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csoa03400]
    LIS82_24035 (uvrB)
DNA repair and recombination proteins [BR:csoa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LIS82_24035 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LIS82_24035 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA AAA_30 P-loop_SecA AAA_19 AAA_22 UFL1 HEM4 AAA_7 UB2H AAA_25 TrwB_AAD_bind HerA_C AAA_16 YqbF_HeH HH_RND_rel DUF87 PMT2_N
Other DBs
NCBI-ProteinID: USK54577
LinkDB
Position
complement(4613146..4615125)
AA seq 659 aa
MKDQFKLVSKYSPQGDQPEAIRKIVEGIQAGKRHQTLLGATGTGKTFTISNVIKEVNRPT
LIIAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYFQPEAYVPSTDTFIEKDSSVNDEID
KLRHSATSSLFERRDVIIIASVSCIYGLGSPEEYRELVLSLRTGMEIERNQLLRKLVDIQ
YERNDINFQRGAFRVRGDVVEIFPASKDEHCLRVEFFGDEIERIREVDALTGEIIGEREH
VAIFPASHFVTREEKMLVAIQNIEKELEERLADLRDNNRLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPPGSTPYTLLDYFPKDLLIVIDESHVTLPQIRGMYNGDQARKSV
LVEHGFRLPSALDNRPLMFPEFEKHIDQIVYVSATPGPYELEHTPEMIEQIIRPTGLLDP
TIDVRPIEGQIDDLIGEIQDRIKRNERVLITTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRLGTYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADKITNSMELALSETKRRRTMQEEHNLKHGITPQTIQKDIREVIRATH
AAEEQEEYKASSQIGKLNKKEREKLIVNMEKEMKEAAKALNFERAAELRDLLLELKAEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
gtgaaggaccaatttaaactagtctcaaagtattctccgcaaggcgatcagcctgaggca
atcagaaaaattgttgaaggaatccaagcgggaaaacgccatcaaacgcttttaggggcg
acaggaacaggaaagacattcacaatttcaaatgtgattaaagaagtcaatcggccaact
ttgattattgcgcacaataaaacattggctggtcagctttatagtgaatttaaagagttt
tttcctgataacgcggtagaatactttgtcagttattacgattattttcagccggaggcg
tatgttccatccactgatacttttatagaaaaagactcgagtgtgaacgatgaaattgat
aaactgcgccactctgcgacatcctccttatttgaacgtcgagatgtcattattatagcc
agtgtttcctgtatttatggattgggatcaccggaagagtatagggagcttgttctatct
cttcgcacagggatggaaattgaaagaaatcaattgctgcggaagctagtggacattcaa
tatgaacgaaatgacattaactttcagcgtggagcatttcgtgttcgtggcgatgtggtg
gaaatattccctgcttcgaaggacgagcactgtttgcgtgtggaatttttcggggatgaa
attgaacggatacgtgaagtcgatgcactgaccggagaaattattggcgaaagagaacat
gttgctatttttcctgcatctcacttcgtaacccgtgaggaaaaaatgctcgtagccatt
caaaatatcgaaaaggaattggaagaacggttagcagatttgcgtgacaataacaggctg
cttgaagctcagcgtttagaacagagaactcgttatgatctcgaaatgatgagagagatg
ggcttttgttcagggattgagaactattccaggcatttaacattaaggccaccagggtca
actccatatacactgctggactattttccaaaggatttgcttatcgtcattgatgagtcc
catgtgacgcttccgcaaatacgcggaatgtacaatggagaccaagcacggaaatctgtc
cttgttgaacatggcttccgtcttccatcagcattagataaccgtccgttaatgtttcct
gagtttgagaaacatatcgatcaaattgtttatgtttctgcaacccctggaccatacgag
cttgaacatactccagaaatgattgagcaaattatccgtccaacggggctgcttgatcca
acgatcgatgtccgtccgatagaaggacaaattgatgacctgattggtgaaatccaagat
cgaattaagcgcaatgagcgtgtgctgattactactttgacgaaaaaaatgtctgaagac
ttgaccgactatttaaaggaaatcggcattaaagttcaatacttgcattctgaggtaaaa
acattagagcggattgaaatcatccgtgagcttcgtcttggaacgtacgatgttctagtc
ggaatcaatcttttaagagaaggtcttgatattccggaggtttctttagtagcgattcta
gatgctgacaaggaaggcttccttcgttcggagcgttcccttattcagacgattggacgt
gcagcccgaaatgcaaatgggcatgtcatcatgtatgcggataaaatcactaattctatg
gaattagcacttagtgagacgaaacggcgccgcacaatgcaggaggaacacaatctgaaa
catggaatcacaccgcagacgattcaaaaagatattcgcgaagttatacgtgccactcat
gcagctgaggaacaagaagaatataaggcttcatcccaaatcggcaagctgaataagaaa
gaacgagaaaaattaattgtaaatatggaaaaagaaatgaaggaagcggcgaaagcactc
aatttcgaacgtgctgccgagcttcgtgatttattattagaattgaaagcggaaggatga

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