Ceratosolen solmsi marchali (fig wasp): 105359183
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Entry
105359183 CDS
T06056
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105359183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csol03041
]
105359183
Spliceosome [BR:
csol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105359183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
PRP4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_like
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
105359183
NCBI-ProteinID:
XP_011494002
UniProt:
A0AAJ6VL79
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All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSDDEDIHYVKKQKTVHYGSLEESERIRIAAVNSEPNDDTNKESHSMSSGPVLIGNIHTS
NEYMELEDDMSKDRQALLEEFERRKKARQINVSTDDFEVKRNLRQLGEPVCLFGEGPADR
RNRLRELLASLGEDAIKKKEDDDKSTQLDKDPETTWYHEGPESLRIARLWTASYSIPRAK
QRLENARKELELPAATRTARRQELLKKLQALTIYCSQIGDTRPISYCQFSPNSKLLATAS
WSGLCKLWSMPDCNLVRTLKGHGCNVGCIVFHPKATITEDIFEEHVGRTCILASCASDGS
VKLWGGGKGEKPLADVEGHEPNRVSRLAFHPSGRFLGTCCYDSSWRLWDLEQQAEVLHQE
GHTRPVHCINFQIDGSVAATGGQDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNGFHI
ATGSEDNSCKIWDLRKRSCIYTIPAHLNLIADVKYQKEDGQYLVTGSYDGTAKIWSNNTW
QPLKTLPGHDGKVMSIDISGDHKFIATSSYDRTFKLWAPDT
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaagatattcactatgttaagaaacaaaagaccgtacattatggttct
ctggaagaatcggagcgaattcgaattgcagctgtaaactcggagcctaacgatgatact
aataaagaaagtcatagtatgtccagtggaccggttctcattggaaatatacatacatcg
aatgaatatatggaactggaagatgatatgtcgaaagatcgtcaagcactcttggaagaa
tttgaacgtagaaaaaaagcgagacaaattaacgtgtcgaccgatgattttgaggtaaag
agaaatttaagacagttgggtgaaccggtttgtttgtttggggaagggcctgcggatcgc
agaaatagattgagagaacttttagctagtttgggtgaggatgcaataaagaaaaaagag
gatgatgataaatccacgcagctcgataaagatccagaaactacttggtatcacgaaggt
cctgaatcattaagaatagctcgtttatggacggcatcttattctattcctcgagcaaag
caaaggttagaaaatgctaggaaggaattagaattaccagcagctacgagaactgccaga
cgacaagagttgttaaaaaagctgcaggcattaacgatatattgttcccaaataggagat
acaaggcctatatcgtattgtcaattcagtcctaattcgaaactactcgctacagcatcg
tggtctggcctatgtaaactgtggtctatgcctgattgtaatttagtacgtacattgaaa
ggtcacggctgcaatgtaggatgcattgtgtttcatcctaaagcgactataaccgaagat
atattcgaggaacatgtgggacgaacttgcatattagctagttgtgcgagcgacggttcg
gttaagctttggggtggtggaaaaggtgaaaaacctttagcagatgtcgaaggacacgag
cctaatagagtgtcgaggctagcatttcatccctctggcagatttttgggaacttgttgc
tatgattcctcatggcgtttatgggacttggaacaacaagctgaagttttacatcaagag
ggtcataccagacccgtacactgtataaattttcaaatagatggttctgtagcagcgacg
ggagggcaagactcgtttggaagagtctgggatcttcgaactggcagatgtattatgttc
atggaaggtcatttgaaatcaatttttggcattgatttttcgccaaatggctttcacata
gcgacgggctcggaagataattcttgcaagatttgggatctgcgaaaaaggtcttgcata
tacacaataccggcccatctgaatttaatagccgacgttaaatatcagaaagaggatggt
caatatttagtgacgggatcttatgatggtacggcaaaaatttggtcgaataacacgtgg
caaccattgaagactttaccgggtcacgatgggaaagtcatgtctattgacatttctggt
gatcataaatttatagcaacaagttcctacgacaggacttttaaactatgggcaccagat
acttaa
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