Ceratosolen solmsi marchali (fig wasp): 105359310
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Entry
105359310 CDS
T06056
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
csol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105359310
03015 mRNA surveillance pathway
105359310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105359310
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105359310
mRNA cycle factors
P-body specific factors
105359310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105359310
NCBI-ProteinID:
XP_011494174
UniProt:
A0AAJ6YBB3
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MSETTQESIPLENLEPDSVSEEDHKFFEEHLKETEQRLAIKEEIRTANVNVTRPPDCHFS
KLDSSLKRNTTFVKKLKTFSGAQLELFMKDMINLNLTKYISEVATALVDAKLKMTDVGPA
IKACSFLHQTYAEFSTHFFENWQKILSLKVGDKISNPSKLRVDLRFYAELINAGIFTHKQ
GLPLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKRIRELSDRLNVAIPKSK
LLSPDKQQNVKSLLRDYYNSLCKHLLKEHKELQAFEKQNRKILQTRGELNTERKEKLEAL
QLSYERLLTSVQNFSDTLDESMPELPVNTEVKAEADESLKMISEGEENSVLEDMWGDEET
RRFYEVLTDLTVFLPGSYTKDTPKQEKADAAITEEVLDEDLTFDELEDIEKVEEAEPEVE
EPQVINISNKILLDAFLTHLPNCVNREMIDNAAVDFLMNLNTKQNKKKLIKALFGVSRIR
LDLLPFYSRLAAILHPVMPEVGNELCLMLKHDFKYHVHKKDQINVESKIKVVRYIGELVK
FKLYSKIEALYCLKVLLHHFTHHHIEMACNLLETCGRFLFCTPDSHQRTKVYLEQMMRKK
AVTALDSRYVTIIENAYYFVNPPECTGIITKKDRLPIHEFIRKLLYQDLSKTNTDKVLKW
MRKLDWEDEGIASYAIRCLTAAYNVKYLNIRCVGSLLAGLVAHYEAVGPLVVDGVLEDIR
LCMETNLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVTMDHGVPSPLDPP
EHLFRVRLVCTLLETCGQYFSGGSSKKKLDYFIVFFQHYYWFKRTDQIWTNENPFPVGME
YMFRDTLVMLRPKVQLFESFKEAQNAVEELRNTLYPNLETTTEQQQQQQQQQQQQQQQQQ
QNQLGEDSNEMNTISEMEEEIVGESSDPKIISDLHFEEAEDLSEAQSEEEWTNEGIERDE
HQGTQDNTQGDQSLSEGCNDGVLMDTSELVAALPSRPKRVHCPEDDDFLSALDKMVSDNI
QDRMRDAVKPQQVDISVPLHVKSTKKTYEQLQEGPSDSSTMDFVLMLRKGNKQQYKNLAV
PVSSELAMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQEAINQSTRPVTVNLNRERR
QKYNHPKGAPDADLIFGPKKIR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaccacacaagagtcaataccgcttgaaaatcttgaaccggatagcgtatcc
gaggaagaccataagttttttgaagagcaccttaaagaaacggaacagcgtttagcaata
aaggaagaaatccgtacagcgaatgttaatgttacacgtccacccgattgtcactttagc
aaactggattccagtctcaaaaggaacacaacttttgtaaaaaagttaaaaacctttagc
ggcgcccaattggaactgtttatgaaagacatgattaatttaaatctcaccaaatatata
agcgaagttgctacggccttggtggacgcaaaattgaagatgaccgatgttggtccggcc
ataaaagcttgtagctttctgcatcagacgtacgctgaattctccacacatttttttgag
aattggcaaaaaattttatccttaaaagtaggtgataaaatttctaatcctagtaaactc
agagtagatttaaggttttacgcggagcttattaatgccggtatttttacccataaacaa
ggacttcctctgttaggttcggtattgacggtcttgattaatatggataaggaggagcac
aacaatgccagcataatattaagcttctgtcgtcattgcggagaagattatgcgggcctt
gtgccaaagagaataagagaactgtcggatagattaaatgttgcgataccaaaaagtaaa
ttactttccccggataagcagcaaaatgttaagtcactgttgcgcgattattataattct
ttatgtaaacacctgttaaaggagcacaaggaattacaagcattcgagaaacaaaatcga
aagattcttcagacaagaggtgaattaaatacggagagaaaagagaagctggaagccctt
caactttcatacgaacgtctattgacgagcgtgcaaaatttctccgacacattggacgag
tcgatgccagaattgcctgtcaacaccgaagtcaaggcagaggccgacgaatctttaaaa
atgatcagcgaaggggaagaaaatagtgtgcttgaggatatgtggggcgacgaagagacg
aggaggttctacgaggtcctaaccgatttgacagtttttcttccaggctcttacaccaaa
gacacgccaaaacaagagaaagcggacgctgcgataacggaagaggtcctagacgaagat
ttaacgttcgacgagctcgaagacattgaaaaagtggaagaggccgagcccgaagtcgag
gagccccaggtcataaacattagcaataagattttgctcgacgcttttctaacgcactta
cctaactgcgtgaatcgcgagatgatcgataacgccgccgtcgacttcctcatgaatctc
aatacaaaacaaaacaaaaagaagctaattaaggcgctcttcggagtatcgcgaattcgt
ttggatttgctaccattttattcgcgactcgcggcaattcttcatccagtgatgccagaa
gtgggcaacgagctctgcctaatgctgaagcacgacttcaaataccacgtgcacaagaaa
gaccaaatcaacgttgagtcgaagatcaaagtggtgcggtacattggcgagctcgttaaa
tttaagctttattcgaagatcgaggccctgtactgcctaaaggttcttcttcatcacttc
actcaccatcacatcgagatggcttgcaatctactggaaacctgcggcagatttttattc
tgcaccccggactcccatcaacgcacgaaagtctatttggagcagatgatgaggaagaag
gccgttacggcactcgactcccgttacgttacgattatcgagaatgcctattacttcgtc
aatccacccgagtgcacgggaatcatcaccaagaaggatcggctccccatccacgagttc
ataagaaagctcctctatcaggatctctcgaagaccaatacggacaaagtcttgaagtgg
atgagaaagctcgactgggaggacgagggcattgcctcctatgccataaggtgcctcaca
gccgcctacaatgtaaaatatttaaatataagatgcgtgggcagtcttttggccggtctc
gtcgctcattacgaagccgtgggtccccttgtcgttgacggtgtcctcgaggacatcaga
ctctgcatggagaccaatttgccgaaattcaatcagcgacggatagccatggttaagtac
ctcggcgagctgtacaattatcgaatggtggagagcggcgacatattcagaacactctat
ctcttgattacctttggcgtgaccatggatcacggtgtgccgagtcccctagatcccccc
gagcatctgtttcgcgttcgattagtctgcacgctgctcgaaacgtgcggccaatacttt
agcggaggctcgagcaaaaagaagctggactacttcattgtattctttcagcactactac
tggttcaaaaggaccgatcaaatatggacgaatgaaaatccattccccgtgggcatggaa
tacatgttccgcgacaccctggtaatgctgcgaccgaaggtccagctgtttgaaagcttc
aaagaggcgcagaacgctgtggaagagttgcgcaacaccctctatccgaatttagaaacg
acgacggagcagcagcagcaacaacaacaacagcaacaacaacagcagcaacaacaacaa
cagaatcagctcggcgaggatagcaacgaaatgaacacgatatcggagatggaggaggag
attgtaggggagagcagcgatcccaagataatttcggatttgcatttcgaggaggccgag
gatttgtcggaagctcagtccgaggaagaatggacgaacgaggggatcgagagggacgag
caccagggcactcaggacaatacacagggcgatcagagcctctccgaaggatgtaacgac
ggcgtgttgatggacacgtcggagctggtagcggctttaccctcgagacccaaacgagtc
cattgccctgaggacgacgactttctttcggccctcgacaaaatggtctccgacaatatc
caagataggatgcgcgacgcggtgaagccccagcaggtcgacatctccgtgcccctacac
gtaaagagcacgaagaagacgtacgagcagcttcaggagggaccatccgacagctccacc
atggactttgtccttatgctgcgcaagggtaataagcagcagtataagaatctagcggtg
ccggtctcctccgagctcgcgatgaatctcaggaaccgggagcaagagcagaaggaggag
aaggagagggtcaagaggctcaccctaaacataaccgagaggcaggaggaggaggattat
caagaggcgattaatcagagcacgagacccgtcaccgtcaatctcaatcgcgagaggcga
caaaagtataatcacccgaaaggtgcgcccgatgccgatcttatattcggtccgaagaag
atcaggtaa
DBGET
integrated database retrieval system
