Ceratosolen solmsi marchali (fig wasp): 105359331
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Entry
105359331 CDS
T06056
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03022
Basal transcription factors
csol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105359331
09124 Replication and repair
03420 Nucleotide excision repair
105359331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105359331
03400 DNA repair and recombination proteins [BR:
csol03400
]
105359331
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105359331
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105359331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
PH_SLA1
Voldacs
Motif
Other DBs
NCBI-GeneID:
105359331
NCBI-ProteinID:
XP_011494203
UniProt:
A0AAJ6YBK1
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYIMNERIAWMLDNKDTVSVSHKYADIKLQKISPEGK
SKIQLQVVLHDGQSSTFHFVNRNGQEAQIQDRDEVKELLQQLLPKFKRKVNKELEEKNRM
LQENPTLLQLYRDLVITQVITSEEFWAQHAAQYTQAKLAPRQEIGVNSAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKKKHQEYVPHKMSESDFWTKFFQSHYFHRDRINVGTK
DLFTECAKIDDQELKKDIQAGIDDPMVDITGFDNVYLDEMYDSGTGKSDKSSGNIVHQSM
IKRFNQHSIMVMKANATHLAALQTQPQSNGSAIPNKNSTISRSVIDSPKSKKQRIQDKLV
YEDLDTKYDMHSNTGPPLVLTQVDRYLHGPVPNIENNHDSTVEHVKTIASQLMKETNKWS
HTAYLSRQPSTALVSPAASVSALGELTPGGSLMKGFREDSLGQLIPKELEKELASVYVCT
CELLKHFWRSFPPTTPQLEEKVTRMHSALRNFHSVKLKPFEDRLQREFSAISQHLTSHLN
QLLNAAYRKFSLWQQRRAGQLR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatcgtcggaagatgttttaatgcaagtgggacaagttcgttacaaaaaaggg
gatggaacgttatatattatgaacgagagaatagcatggatgcttgataataaagatacc
gtttcagtaagtcacaaatatgcggatataaaattgcagaaaatctcgcccgaagggaag
tctaaaatccagttgcaagttgtacttcacgatggtcagtcgtcgacgttccactttgta
aatagaaatgggcaagaagcacaaattcaagatagagacgaggttaaagaactgctgcag
cagctattgccaaaattcaagagaaaagttaataaggagctggaggagaaaaataggatg
ctgcaagagaatccgactctacttcagctttatcgggatttggtaataacacaagtgata
acgtcggaagaattttgggcccagcatgcagcgcagtatacgcaggccaaattggccccg
cgtcaagaaattggtgtaaatagtgcctttctagctgatatcaaaccacaaactgacggc
tgcaatggactcaagtataatttaacggtggatataatagaatgtatattcaaaacatat
ccagctgtgaaaaagaaacatcaagaatacgtgcctcacaagatgtctgaatctgatttt
tggaccaaattctttcaatcacactattttcatcgagatcgtatcaatgtagggaccaag
gatctatttaccgaatgtgccaagatcgatgatcaggagttgaaaaaggacattcaagcg
ggaatcgacgatcccatggtggacataactggtttcgataatgtgtacttggatgagatg
tacgatagtggaactggcaaatctgacaaatcgtccggcaacattgttcatcaaagtatg
atcaaaagattcaatcaacatagcataatggttatgaaagccaatgctacccatttggca
gcactgcaaactcagccacaatctaatggctcggcaataccaaataaaaattctaccatt
agtcgatccgtaattgattctccaaagtccaaaaagcaacgtatacaagataagttagta
tacgaagaccttgatactaagtacgatatgcattcgaatactgggccaccattagtatta
acgcaagtagataggtatttacacgggccggtcccaaatatagaaaataatcatgattca
acggtagaacacgtcaagaccattgcaagtcaattaatgaaggaaacgaataaatggtcc
catacggcttacttatctcgacaaccatccaccgctttagtgagtcctgctgcatctgta
tcagcactcggagaactgactcccggtggttcgctaatgaaaggatttcgcgaagatagt
cttggtcaattaatacccaaggagttggaaaaagaacttgccagtgtttacgtttgtacg
tgtgaattgttgaaacatttttggagaagctttccaccaacaacacctcagctcgaagag
aaagttacgagaatgcactcggcactacgtaattttcattcggttaaactgaagccgttt
gaggaccgtctgcaaagagaattttcagctattagtcaacatctcacgagtcatctaaat
caattattaaacgctgcgtatagaaaattttctctttggcaacaacgaagagctggacaa
ttgaggtag
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