Ceratosolen solmsi marchali (fig wasp): 105359470
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Entry
105359470 CDS
T06056
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105359470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csol03400
]
105359470
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105359470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
105359470
NCBI-ProteinID:
XP_011494385
UniProt:
A0AAJ6VKR2
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MFSSSFMFQKPNSTIRIFDRSDYYTLHGNDALFAAKEIFKTTSVCKKIGPEHNKIDGVIL
NKNHFETFIRDLLLVKQYRVEVYVNNGSAKNQDWNVEYKGSPGNLAQFEEVLFNNNDVAV
ESAILAVKVGSEGTSKIVGVSCIDSIKSIISVSEFEDGDSFMNLETIVVLLKPKECVLQV
GEGNTDFQIVKQLMERNNVLVTPKKKRDFSTDSLVQDLNNLLRFNKGQQRNSQALPEINL
KRAMAATASLISYLNLTASSGEGGLFTLEEIPRNQYLRLDAAAIKALNLEPSGRLGASAN
SSLLGLLDKCKTALGKRLLAQWIRQPLRDLALINERHEVVEALVADTDTRSTLSEDYLGR
IPDLHQLAKKLGNKKAGLQECYRIYQCMMYLPLFLEKLNALAHVPAVKAMIFDSLRESIE
EMDKFQQMVEQTIDLDSADRGDFLVKAEFDDELKVLKSEMDDIENKIQKVLHKAANDLGM
ESGKSIKLELNPRLGYLFRITLNEEKNIRNNKSYTVVNSIKGGIRFKNKNLEILNDEYLS
KKNSYTSQQKLIVAEIVETAAGYVPPIKVIGGIIATLDVLNSFAQVAVSASEMYVRPKML
SNETQELRLVKVRHPCLEIQDGVNYIANDAHFTKDSRFHIITGPNMGGKSTYIRSIGVTA
LMAHIGSFVPCERATISILDSILARIGADDSQIRGLSTFMAEMVETSAILRTATSNSLVI
IDELGRGTSTYDGCGIAWAIAEHLAKNVKSYCLFATHFHEITRLAEDVPSVNNFHVTALV
DEKLVLLYKVKPGICDQSFGIHVARMANFPDDVIEFAKQKQAELEDLQGAVFEGSDNPEK
KRNIINDGEKMIKDFMEKCTGSNESFTDEELINRVRNLKEEVLAHNNPYIKALLGMS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcttcttttatgttccagaaaccaaatagcaccataagaatctttgaccgc
tcggattactacacattacatggaaacgatgctctattcgctgctaaggaaatttttaaa
acaacctcggtttgcaagaaaattggaccagagcacaacaaaattgacggcgtaatccta
aataaaaatcattttgagaccttcatacgtgacttattacttgtgaagcagtatcgcgtt
gaggtttacgtgaataacggctcggccaagaatcaggattggaacgttgaatataaagga
tcgccgggtaatctcgctcaattcgaagaggtcctttttaacaataacgacgttgccgtc
gagtctgccattttggccgtgaaagtcggatccgagggcacatccaagatcgttggcgtc
agttgtatcgattcgattaaatcgataatttcagtatctgaattcgaagacggcgattcg
ttcatgaatctcgaaacgatcgttgtattattaaagccaaaagagtgcgtattacaagtt
ggtgaaggaaataccgactttcaaattgttaaacagcttatggaacgaaataacgttttg
gtaacgccaaagaagaaacgcgattttagcacggattccctagtacaagatttaaataat
ctgctgagattcaataagggccaacagcgtaattctcaagcccttccggaaattaattta
aagcgggcaatggctgcgactgcctctcttataagctacttaaatctgacggcgagctcc
ggcgagggcggactgttcaccctcgaggagatcccgcgcaaccagtacctgcgtctcgat
gccgcggccatcaaggctctgaatctggagccgtccgggcgcctcggggcctcggccaac
tcgagcctcctcgggctcctagacaaatgcaagacggcccttggcaaacgactgctcgcc
caatggatcaggcagccgctccgcgacctcgccctcatcaacgaacgtcacgaggtcgtc
gaggccctcgtcgcggacacggacacgcgctccacgctcagcgaggactacctcggtcgt
atacccgacctccatcagcttgcgaagaagctcggcaacaagaaggcaggcctgcaggag
tgctacagaatttatcaatgcatgatgtatttgccattgttccttgaaaagctcaatgca
cttgctcatgtacctgctgtgaaagccatgattttcgactcgttgagagaaagtatcgaa
gaaatggataaatttcagcagatggtcgagcaaactattgacttggattctgcggataga
ggggactttttggtgaaggcagaattcgacgatgaattaaaagtgcttaaatcagaaatg
gacgatattgagaataaaatacaaaaggtcttgcataaagcagcgaatgatttgggaatg
gagtcgggaaagtctattaaattagaactaaatccccgacttggatatctttttagaatt
acattgaacgaagagaagaatattagaaataataaatcttatacggttgtaaattcaata
aaaggtggcatccgattcaagaataagaatttggaaattctcaacgacgaatatttatcg
aaaaagaattcgtataccagtcagcaaaaactcattgtcgctgaaattgtagaaacggca
gctggctacgttcctccaataaaggtcattggtgggattattgcaacactcgacgtgtta
aattcttttgcacaagtagcagtaagtgcgagtgagatgtacgtccggccaaaaatgttg
tctaatgaaacgcaagagcttcgtctcgtgaaagttcgacatccgtgtttagaaattcaa
gatggagttaattatattgccaacgatgctcattttacaaaagacagtcgatttcacatt
atcactggaccaaacatgggtggaaaaagtacctacatcagatcaattggagtaacagca
ttaatggctcacattggaagttttgtaccatgcgaaagagccaccatatcgatattggat
tctattttggcgagaataggcgctgacgattcgcaaataagaggactttccacctttatg
gcggagatggtcgagacatccgctattttgagaacggcaacctctaattcgctagttata
attgatgaacttggacgaggaacttcgacatacgatggttgtgggatagcatgggctatt
gcggaacacttggcaaaaaatgtaaagtcatattgtctgttcgctacgcattttcatgaa
attacgcgattggccgaagatgtgccatcggtaaataattttcatgttacggcactcgtc
gacgaaaaactggtactgttgtacaaagttaaacctggaatttgtgatcaaagttttgga
attcatgtcgctagaatggctaattttcccgatgatgtgatcgagtttgccaaacaaaaa
caagcagaattagaggatctacaaggtgctgtattcgaaggatcggacaatccggaaaag
aaaaggaacatcattaatgacggcgaaaagatgatcaaagacttcatggaaaaatgcaca
ggttctaatgaatctttcacggatgaagaattaataaacagagtcagaaatttaaaggaa
gaagttctagctcataataatccctatatcaaagcattattaggaatgtcataa
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