Ceratosolen solmsi marchali (fig wasp): 105359581
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Entry
105359581 CDS
T06056
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105359581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105359581
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105359581
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105359581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
105359581
NCBI-ProteinID:
XP_011494503
UniProt:
A0AAJ6YBV1
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MNLDSLSFTLSQISYLVASLCKKNFRDSCQEISVLVQWKGLEADRHLLRCLFSHVDFSTG
EPPEPNSKDYYQIQLLKQECDSLLCKPSLVSNLCFAIDYPFHHKNRIFPSPKFFQHLRKV
LGLSLVQEVVFAIALHHSQNSDISIRASEHIQKQLPELIKNYVNAENNKKLSEEGLHDSS
PEILHLILTYVFKESTKVELSLEAKEKFLKSLTRDFPRELVPVVLAPLLYPGDGEPSQKS
IELNMAVNQMDNTNLVEMIMELGYRFTSTIEECRSNLASLGARDMTARCVAKVLAYMART
CSGLEDTGGLHSFWESSATNQDNKEKSGETPTTWNVEVFVQTVKEANSSLSWNEVTAKLD
HSEFIIKDRQGLSLLIKGLRLGLQNQGYPLDVFPVELFYRHWENVKGQFSLIQQILKYPE
IFCFADYAYHSVVVDVLKAAPEADTKEAQTWRSLNVVELLLYMAERGLHTPVQDIFKWPT
QHCPDVLALALLQINPPITMLRQELLSTLMPIFLGNHPNSAVILHHAWHSNNAKIKTIIM
HAMAEWYLRGDHDQTRLSRILDVAQDLKALSALLNAQSFPFVIDLACLASRREYLKLEKW
LMDKIRDHGEAFVAACVKFLQRRCPQVMGPAIKEDPTVPKASQLPQETLTTILHCLQVCV
GNVSQECADAILAMVQNCSLMLSKGTLSRLPPPVLRHRAMESFNPALSGQLFSTKQVDSL
TNLNSSLASMSLSSSLGPPSNSAFNLPGTLGPLVSAPGSPSRLMGPSPSPFPMLPLSSQL
HSGPVGTQGSSVIPGGATIGGLNRLGPPTGIEKTRMQETSNLFPDISQNVSKEIEDEANG
YFQRIYNHPPHPTLSIDEVLDMLKKFQDSSIKRERDVFHCMLRNLFEEYRFFPQYPDKEL
HITAQLFGGIIERGLVNSYVTLGLALRFVLDALRKPEGNKMYYFGIAALDRFKSRLKEYT
TYCEHVRSIQHFSEFPPHLVEYVEYGLQGQEPPTXXXVLPKSLAAMLAPVTTPYKTVTTT
TITTTTTQAKPSTTSTTSLSARPSIANATNIDTLLVATDKEEKITSPPEALQDKTAFIFN
NLSQLNLQQKCDEIRDIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLKVPDVNRM
VTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILHVDIDLKSLLVEA
YCKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLNLKFEIE
VLCKNLSIDVAELKPAIYLKDPEKLVNLEYQLSQPNKKIQEVTNNATNQQQQQQVQVQVE
DLVGPSPAVVAQQQQQQQQQQQQQQQQQQQQQSSAPVANTTPSLPTGPPEPRFNYMDISV
TNIANIAQHITINNNLTLFQSHPHLKPFVRQAVERAIQEWIHPVVDRSIKIALTTTEQTV
KKDFALDPDETKMRTAARHMVRNLTAGMAMITCRDQILASISSNLKNAFLMAIIGTSPQQ
KELAEQAANVVAADNMELACAFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPL
AKYQAERMPEQIRLKVGGVTAQQMTVYEEFARNIPGFLPLSERETQTLFVPKAIAEAPAI
QPFATNAPAAAAMAVATAQQVAYAAAVSNDEVGTMLEKLGGEVEVLLATMGPSTPPPQHA
ALHSLLESLILTRRSRDAGAAMGLLKKAVEGLLDGPTLSSGVMDSEVLMRYRELHLRILK
CLQDPRAYGMQWTNKHITRCLTECREEYRYNFEAVDCLIRSHLISLPQYDLAIAQAMESG
NTMATAFAMQLVQLYLIDERQTTHVTESDLFHTIELVARMALHRAPPEGISLFRLNSLIE
SLRVNHDPAVLTDRAPAGPTAHIHSGILQVRARDFEDPPGLMEKTEYLLREWVNMYHNPT
HARDPTKAFGIFVHQMNIHGILKTDDLITRFFKLSTQMCVDHCYRALAETNNAPSVVRAK
CFHTLDAFVRLVALLVKHSGDTNNTHTKINLLNKVLGIVAGVLLQDHEMRGTDFQQLPYH
RIFIMLFLELCAPEPVLEAVNYQVLTAFCHTLHILRPAKAPGFCYAWLELVSHRVFIGRM
LAITPQQRCWGIYAQLLIDLFKYLAPYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLC
DYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLQEITHAPRVLTNFASL
IQPVTFKKELDSYLKARAPVTFLGDLRTDLQVSQEAGMRYNIQLMNALVLYVGTQAIAFI
RSKGHTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLY
LFSEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAYKFWQHEFVHCAHEIE
KLFESVARSCMVQKQVQPTPEPEIPE
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttatcacaaatcagttatttggttgcaagtttg
tgtaagaaaaactttcgggacagctgccaagaaatatcggttttggtacagtggaagggc
ttagaggcagaccgacatttgctgcgctgtttgttctcgcatgttgatttttcaaccgga
gaaccacctgagccaaactctaaagactactatcagatacaactactaaaacaagagtgc
gacagtctcctctgcaaaccatcgcttgtttcaaatctttgctttgccattgactatcca
tttcatcataaaaatcgaatcttcccatcaccaaaattttttcaacaccttcgcaaagtg
cttggattgtctctggtgcaggaagttgtctttgcaatagctcttcatcattcacaaaat
tctgatatatccattcgagccagtgaacatatacaaaaacagctgccagaattaataaaa
aattacgtaaacgcagagaacaataagaagctgagtgaagagggattgcacgattcttct
cctgaaatcttacatctcatattaacctacgtatttaaagaatcaactaaggtcgagctc
tctttggaggcaaaagaaaaatttttaaagagcttaacacgtgactttcctcgtgaactg
gtaccagtggtgttggcaccacttctgtatccaggtgacggggaaccttcacaaaaatca
atcgaattaaacatggctgttaatcaaatggataatactaatttagtagagatgattatg
gaattgggctatagatttaccagtaccatagaagaatgtcgttccaacttggcgagtctc
ggggcccgagacatgaccgcgcgatgtgtagctaaagttttagcttacatggcccgaacc
tgcagtggcttggaagacactggaggtttacattctttttgggaaagttcagcaacaaat
caggataacaaagaaaaatcaggcgagactccaacgacgtggaatgtcgaagtctttgtt
caaacagtgaaagaagcgaattcatcgttgtcatggaacgaagttacagctaagcttgac
cattcagaatttataattaaggatcgtcaaggtttaagtcttttaatcaaaggacttaga
ttaggtcttcaaaatcaaggctatccattagatgtatttccagttgaacttttttaccgg
cactgggaaaatgttaaaggccaattctcactaatccaacagattctcaagtatccggaa
atattttgctttgccgattacgcatatcattctgtagtcgtagatgtacttaaagcagca
cccgaagctgacaccaaggaagcacaaacatggaggtcactcaatgtggttgaattatta
ctgtatatggctgaacgaggactacatacacctgtccaagatattttcaaatggccaacg
caacattgcccagacgttctggcgcttgcattattacagattaatccacccattacgatg
ctcaggcaggagctcttgagtactctgatgccgatatttctaggcaatcatccaaattct
gcggtgattctccatcatgcttggcattcaaataatgccaaaatcaagactattataatg
catgcgatggcagaatggtatttacgaggagatcatgaccaaacgcgactttcacgcatt
ctcgacgtagcccaggacttgaaagccttgtccgcactactcaatgcccaatcatttccc
tttgtaattgatcttgcctgccttgcttcgagacgcgagtatttgaaactggaaaaatgg
cttatggacaaaatacgagatcacggggaagcctttgtcgctgcatgcgtcaagttcctt
cagaggcgatgccctcaggtcatgggtcccgctattaaagaagatccaacagtccccaaa
gctagccaactaccacaggaaactctcacaactatactacattgtctgcaagtttgtgtt
ggaaatgtttcacaagaatgtgccgatgcaatcttggctatggtacaaaattgtagttta
atgttgagcaaaggaacattaagcaggctaccaccgccagttttaagacatagagctatg
gaatccttcaatccagctttaagtggacagctattttcaacgaaacaagtagacagtttg
acaaacctaaactcgagtctggcatcgatgagtcttagctcaagccttggaccgccgagc
aattccgcgttcaacttaccaggcaccttgggcccccttgtctctgcaccaggttcacct
tctcggctaatgggaccatcgccttcgccatttcccatgctgcccctctcgtctcaatta
cactctggacctgtaggtacacaaggatcatcggtcatcccaggtggtgcaacgataggt
ggtctgaataggctcggaccacccacgggcatcgagaagacccgcatgcaagagacctcg
aatctattccccgacataagccaaaatgtttccaaggaaattgaggacgaggccaacgga
tattttcaaaggatttacaatcatccaccccatccaacgctgtcaatcgatgaagtgctc
gatatgcttaaaaaatttcaagattcaagcatcaagagagagcgcgatgttttccattgt
atgctgagaaatctattcgaagaatacagattctttccacaatacccggacaaagaattg
cacatcacagcccagctgtttggcggtataatcgagcggggtctcgttaacagttacgta
actctgggtcttgcattacgctttgtcctggatgccttacgcaaacccgagggaaacaaa
atgtactatttcggcatcgcagccttagatcgctttaaatcccgtctgaaggaatacacg
acatattgcgagcacgtccgcagtatacagcacttcagtgagtttccgccacatcttgta
gaatacgttgagtacggtctacagggccaggagccgcctacnnnnnnnnnngttctacca
aaatcccttgcggcgatgctcgctccagttacgacgccttataagaccgtaacgacgact
acgatcacgactacgacaactcaggctaagccttccacgacttcgacgacttcgctttct
gcaaggccctccattgccaacgcaacgaacatcgacacgcttcttgtagccacggataaa
gaagaaaaaatcacttctccacccgaggctctgcaggacaagacggccttcatattcaat
aatcttagtcaacttaatctacagcaaaagtgcgatgagatcagggatatcgtaacggaa
gaatattggccctggatggcccaatatcttgtcatgaagagggcgagtattgaactcaat
tttcatgcattgtattcaaactttttggactgtttgaaagtgccagatgttaaccgaatg
gtaacaagagagacctttaggaatatcaaagtactgcttcgtagcgataagggaatagct
aatttttcggatcgctccttattgaaaaatctcggccattggcttggaatgctcacgctt
ggtagaaacaagcctatcttacatgtagatattgatttaaagagtttacttgtcgaggca
tattgtaaaggtcaacaagagctcctttacgttgtgccctttgttgctaaagttctcgag
agttgtgcgaagagtcgagtgtttcgaccgcccaatccttggacaatggcaatcatgaat
gtattagcggaacttcatcaagagccagatcttaaactcaatctcaaattcgaaattgag
gtgctctgtaaaaatttaagcatcgatgtggccgagctgaagcctgccatttatcttaag
gatccggaaaaacttgttaacttagaatatcaattatcacaaccgaacaagaaaattcaa
gaagtaactaataatgcgaccaatcaacaacaacagcaacaagtacaggttcaggtagaa
gatttagttggaccgtctccagctgtagtagcgcagcagcagcagcagcagcaacagcag
cagcaacaacagcagcaacaacagcagcagcaacagtcatcggcgccagttgctaataca
acgccttcattgccgacgggaccgccggaaccgcgattcaattacatggacatatcagtc
accaatattgccaacatcgctcaacatataaccatcaataacaatttgaccttattccag
tcgcacccacatctcaagccattcgtaagacaagcggtagagcgcgctattcaagaatgg
atacatccggtggtcgaccgatccatcaagatcgccctcacgacgaccgagcagaccgtg
aaaaaggatttcgctctcgatcccgatgaaacgaaaatgcgcacggctgcgcgccacatg
gtgcgcaacctcaccgcgggaatggccatgatcacctgccgcgaccaaattctagcgtcg
attagctcgaacttgaagaacgccttcctcatggccataatcggcacctcgccccagcag
aaggagcttgccgagcaggcggcaaacgtcgtcgcggccgataacatggaattggcttgc
gcgttcgtgcagaaaacggctattgaaaaggctattcctgaaatggataaacgattgctc
aatgaaatcgagctgcgaaagatcgcgagacaagagggaaggagatattgcgatcccttg
gccaaatatcaagccgagcgcatgcccgagcaaatcagacttaaggtcggtggagtgaca
gcccaacaaatgaccgtctacgaggaattcgcccgcaatattccgggcttcttgcctctc
tccgaacgtgaaactcaaactctcttcgtcccaaaagccatagctgaagcaccagcgatt
cagccattcgccacgaacgcaccagcggcagctgcaatggcagtcgctacggcacagcag
gtagcctacgccgccgccgtcagcaacgacgaagttggcacaatgctggagaaacttgga
ggcgaggtggaggtgctccttgccacaatgggaccgtcgacaccgccgccgcaacacgcg
gctcttcacagtctgctcgagtctcttatattgacgagaagatcgagggacgctggtgcg
gcgatgggattgctgaagaaggccgtcgagggtctgctggacgggccgacgctatccagc
ggagttatggactcggaagtattaatgagatacagagagctgcatctgaggatactcaag
tgcttgcaggatccaagagcttacggcatgcaatggactaacaaacatattacaagatgc
ctcacggagtgccgagaagagtacagatataattttgaagctgtagattgccttattaga
tctcatttgataagtctgcctcagtacgatttagcgatagctcaagcaatggaatctggt
aatacaatggcaacagcttttgctatgcagttggtccaattgtatttaatcgatgaaaga
caaacaactcatgttacggaatccgatctttttcatacaattgaattagtagcgagaatg
gcactccatagagccccacccgaaggaatatcactctttagattaaattcattaatcgaa
tcattaagagttaaccatgatcctgcggtactgacagatagagcacccgctggtcccact
gctcatatccactctggaattcttcaggtgagagcacgcgacttcgaggatccgccaggc
ctgatggagaaaaccgaatatctactgcgcgaatgggtaaacatgtaccacaatccaact
cacgcacgtgatccaaccaaagctttcggcatttttgtccatcaaatgaatatccacggt
atcttgaaaaccgacgatctcattacacgctttttcaagctaagcacacaaatgtgcgtc
gaccactgctatcgggcattagccgagacgaataacgcgccatccgtcgtccgagccaaa
tgctttcacactctagatgccttcgtaagactagtagctctgttagttaagcattccggg
gatacaaataacactcacaccaaaattaatttgctgaataaggtcttggggatcgtggcg
ggtgtgttgttgcaagatcacgagatgcgcggtaccgactttcagcagctaccctaccat
cggatcttcataatgttgttcctcgaactctgtgcccccgagcccgtcctcgaggccgtc
aactaccaggtgctgaccgccttctgtcacaccctgcacatactacgacccgctaaggcg
ccgggcttctgctacgcctggctcgagctcgtctctcaccgtgtcttcatcggtcgtatg
ctcgccattacgcctcaacagcgctgctggggcatttacgcccaactactcatcgacctc
ttcaagtacctcgcaccctatctccgtaacgccgagcttgccaagccggtgacactactg
tacaagggtaccctgagagttttgttggtgctgctacacgacttcccggagttcctgtgc
gactaccattacggcttttgtgacgtcatcccaccaaactgcatacagatgcgcaatctg
atcctgagcgcatttccccgcaacatgcgactccccgatccattcacgccaaatctcaag
gttgacatgctacaggagatcacgcacgcgcctcgggtgctaactaatttcgcctcgcta
attcagccggttacgtttaagaaggagttagattcctacctgaaagcccgagcgcccgtc
accttcctcggggatctgcgtaccgatctccaggtctcccaggaggcgggaatgcgctat
aacatccagctgatgaacgcactcgtcctttacgtgggcactcaagcgatagcttttata
cgtagcaagggtcacacgccgaacatgtcaacgatcgcccactcggcgcacatggacatc
tttcaaaatctggcggttgaccttgacacggagggtcgctaccttttccttaacgcaatt
gccaatcagcttcgctatcccaacagtcacacgcattacttcagttgcacgcttctttat
ctgttctccgaggcgaacaccgaggctatacaagagcaaatcaccagagtcctgctcgag
agactaattgtcaatcggccacatccgtggggactactcattacattcatagagcttatc
aaaaatccagcgtacaagttctggcaacacgagttcgtgcattgtgcccatgagattgaa
aaattgttcgaatcagtagctcgttcatgtatggttcaaaaacaagttcaacctactcca
gaaccagaaatcccagagtga
DBGET
integrated database retrieval system
