KEGG   Ceratosolen solmsi marchali (fig wasp): 105359850
Entry
105359850         CDS       T06056                                 
Name
(RefSeq) uncharacterized protein LOC105359850
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105359850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csol03021]
    105359850
   03019 Messenger RNA biogenesis [BR:csol03019]
    105359850
Transcription machinery [BR:csol03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     105359850
Messenger RNA biogenesis [BR:csol03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     105359850
SSDB
Motif
Pfam: Pcf11_helical CID Pfc11_Clp1_ID zf_PCFS4 Pcf11_C zf_UBZ
Other DBs
NCBI-GeneID: 105359850
NCBI-ProteinID: XP_011494871
UniProt: A0AAJ6VLX4
LinkDB
Position
Unknown
AA seq 1888 aa
MKRLKNYIYLVYITKTKYYLKMSGSNNSKGHNSEEIVEEYISSLLELTINSKPLINMLTI
LAEDYIDHATAIVEAVEVHLQKVRSEIKLPVLYLIDSIVKNVNRAYLSLFTKNIVNTFCS
VFEKVDENTRASMWKLRQTWNEVFPAKKLFALDVRVHNIDPAWPITPLPPSSVSTKSIHV
NPKFLTMQKQQQATQQPTIGVTQQVPQVPPPTTIVPVITAAVHTSVPVVKISTGKHVSTS
EAEMREQLLKKQKELIDLQKQKIELELLQAKASLEQQRRQFDKQTTYLKTDLSISPDDAL
EKPIAVIVSPSQGLKPIEKQLPTTTATYLKADDNKGGLKILPVNNIVIASAKAMISRDPR
LKMAPVPQENVGSTSIEDFTKQQQLVQQLKLQMQSKLNNEESFSLNDADKRMSELESASI
SNKNIDSKRAKDSNHKKEPSTTTTTITTTTTTITTTTDTMIPQRNSSNNIKDQLKGFSSK
NSSSRGSSLSLKTSSSSSSSSLRKVSTKSRSKLSYSSSVPNKIPKLEDNSSLLADKHLST
KKSKSRKVHSPSSISVTATSNGNANSSSYRIPRRTAAHESLIATAVCSSISGNNKSAFLQ
SEPDEEEQSSSIIVSPPHQPVMSFKEIRSNAKMRNYVRRNKEGSRSPEFNENTKNFTIPD
ASKDEDLRAPIVNVSVVAAGAALDTKEDLDLRVLTMPANKRKSSDLLDSTNVKRSKAEKF
DALFGNEDVDLRTLTNPKAGRPPTPPPPVISGDEQSKDNCWAKLKTPSKSERESMKPLLD
RNRDRLGRPRLYNKLISTXXXXXXXXRRNHCPLFSRDIDRHNERNADRNIEIIMKQAAEQ
LNQGTITKAQYNTLIQEVLHMSEDQKLRAAQRKEKEIGMLVWEKSVGIDNSTVAQGFGVS
NDENSLRKEHPAMLSRPPGQVGPRWQGPWHQPWTHPPPFSSGPHGFPSGPEGFRLLGPWQ
NHPRLFPGSIRSDFHPPYHGGFGPRMGPPPSMGPNGPVMISNGPMKPIVKSGPLNPLGTG
GPMGSIPPSLLVSNGPIRPETVVKRSSTSTLITPSMNNISNSTKMEIANDSLISTKNSGQ
LPQADPKLLEEIAKDTMKSINIDNVPREIRYYGNIGVVFMRWDDPRDIGFQDGARRIFID
GKDSILCNFNDDYREFSYEGEIHRIKLGTPTRELYINEKWYECYFGGRPITIDLGNKKIS
MKLDGPPPQVKIGNLKRTDLVIGKINLIINARNMVPVFLDSKPQVFEIDGKPCTLEFTDA
LQTVLLNGRPFKVEFGGLPKPIIIQNKKHFIRFSVLPRGFHAGYVKITGMKGEQPKEAPV
NDTLLETSQKMESITTTCEDKTSLNVPSDLDHDSILLDDMDVAINSKPDLQLDVLSSVVP
SAMAPSSGLSYQAEPVENSPTTVPALTLPLNLNELFQRLVETGIVPNLVETKKQEEEEEK
KQLEIILISFDKPETLKIKQPIIVMALYSGMQCSSCGARFAPEMATRYSHHLDWHFRQNR
KERDLARKAHSRPWYYDVSDWIQFEEIEDLEDRAQNWFETEKQTAETESISVEDVLQETQ
LPSVPTGSDEDSYCEVCHEAFEQFYNEEKEEWHLRPTICFEDKNYHPLCLEDHKSALEKS
AMVLEEAITEMEEETKKEDELKKIERNIKKEIKDKLIIELKPKENNSKEKEKMDAEIVDI
QKEEKIEDIDDSEPIEIIEPLPRKIELEEINDSSDDETIEEMKKEHRKNLLSDTIIKTQE
YNAYEKRIEEKIADNVPLIFENVKIKEEPIEYEIELEESIAEAAAVDTTQVAVKSTIDGN
VELDSATSTMPSAPSKIKINITKSLNHVTKELEEIKEKDKKLNETSMDPAPVKLLTPAAI
KSTLQGKKLSILPTVEKGYELSGLCSIM
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgaagaggcttaaaaactatatatatttagtttatattacaaaaactaaatattatttg
aaaatgtccggaagcaacaactctaaaggtcacaactcagaggagattgttgaggaatat
atttcatctttattagaactgacaatcaacagcaaacctctgattaatatgcttacaatt
ttagcagaggattacattgatcatgccacagccattgttgaagcagttgaagtccatttg
caaaaggtgcgaagcgagatcaaacttcctgtactttatctcatcgattcgattgtcaag
aatgttaaccgagcctatcttagcctcttcacaaaaaatattgtcaatacgttttgcagt
gtttttgagaaggtggatgagaatacaagagctagtatgtggaaattacgtcagacgtgg
aatgaagtttttcctgcgaagaaattatttgcccttgacgtgcgggttcacaacatcgat
ccagcctggccgattacgccactacctcctagcagtgtatcaacaaaatcaattcatgta
aatccaaaattccttactatgcaaaagcaacaacaagcaactcaacagcctactatagga
gtgacccaacaggtcccgcaagtcccgccaccgacaacgatcgtgccggttattacagct
gcagtccatacatccgtaccagttgtaaagatatcaactggaaaacatgtatccacttct
gaggcggaaatgcgtgaacagttgctcaagaaacagaaagagcttatcgacttgcagaag
caaaaaattgagctggaattgctgcaggcgaaggccagtctcgagcagcaacgtaggcag
tttgacaaacagactacgtaccttaaaactgatttgtctatttcacctgatgatgcctta
gaaaagccaatagcagttattgtatcacctagtcaaggtttaaaaccaatagagaaacaa
ttacccacaacaacagctacctacttaaaagctgatgataataaaggcggcttgaagata
ttaccagtaaataatatagttattgcatcggcaaaggcaatgatatcgcgtgatcctcgt
ctgaagatggccccagtgccacaggaaaatgtaggatcaacgagcatcgaggattttacg
aagcaacaacagctcgtccagcaattgaaacttcaaatgcagtctaagctaaacaacgaa
gaaagtttttcattaaatgatgcggataagagaatgagtgagcttgagagcgcgagtatc
agtaataaaaatatcgacagtaaaagagcaaaagatagtaaccacaaaaaagaaccgagc
accacaactacaaccatcactaccaccactaccacgattactaccaccactgatacaatg
attccacagcgtaatagtagtaataatataaaagatcagttgaagggtttctcgtcaaaa
aactcttcttcacgtggtagtagcttatctttgaaaacctcatcttcctcgtcctccagt
tccttgagaaaagttagcactaaatcccgatcaaaattgtcttattcttcgtccgtgcca
aataaaattccaaagttggaggacaactcatcgctcttggctgataaacatttgtccacc
aaaaaatcgaagtcccgaaaagtccatagtcccagttcaatttcagtcaccgcgacgagc
aatggaaatgcaaatagttcatcctatcgaataccaaggcgcacagctgctcacgaatca
ttaatcgcaacagcggtatgcagtagtattagtggtaataataaatccgcattcctgcag
tccgaaccggatgaggaggaacagtcgagctcgataatagtctctccaccccatcaaccc
gtaatgagtttcaaagaaatacgctcaaatgccaagatgagaaattatgtgagaagaaac
aaagaaggaagtagaagtccggagtttaatgaaaacacgaagaatttcaccatacctgat
gccagtaaggacgaggatctgagagcaccgattgttaacgttagcgtggttgcagcgggt
gctgctcttgatacgaaagaagatttagatttacgagttcttacgatgccagctaataaa
aggaaatcatccgatttactagattctacgaatgtaaagagaagcaaggctgaaaaattt
gatgcattgtttggaaatgaagatgtggatttacgtacgttaacaaatcctaaagctggt
cgtccacctaccccaccgcccccagtaatatctggtgatgagcaaagcaaagataattgc
tgggctaaactaaagacgccttcgaagagcgaacgcgagtcgatgaaaccgttgttagat
cgcaatcgtgatcgcctcggccgtccacgtctctacaacaaactcatctccacnnnnnnn
nnnnnnnnnnnnnnnnagcgtcgtaatcattgtccattatttagtcgtgatatcgataga
cacaatgagcgcaatgctgaccgtaatattgagatcattatgaaacaggctgcagagcag
ttgaatcagggcaccattaccaaggctcaatacaatactcttattcaagaagtcttacat
atgagtgaagatcagaaactaagagcagctcaacgtaaagaaaaagaaattggcatgctt
gtgtgggaaaagagtgtgggtatagacaattccacagttgcccagggttttggagtgagc
aatgatgagaatagtttgcgtaaagagcatccggcaatgttgtcacgtccacccggtcag
gttggccctagatggcaagggccctggcatcagccctggactcatccaccaccattttca
tccgggccccacggttttcctagtggtccagaaggtttcagactattaggtccttggcaa
aaccacccacggctctttccagggtctataagatctgattttcatccaccatatcatggc
ggttttgggcctcggatgggtccaccaccttctatgggacccaatggaccggtaatgata
tcgaacgggccaatgaaacctatagtaaagagcggaccattgaatccactaggtacagga
ggtcctatgggatctattccaccaagtttgttggttagcaatggacccataaggccagag
acagtagtaaaaagatcatcaacctcaactctcattactccaagtatgaacaacattagt
aacagtacaaaaatggagatcgcgaatgatagtttgattagtactaagaatagtggacaa
ctaccacaagccgatcctaaactcttggaagaaatcgcaaaggatactatgaagtcaatc
aacattgataatgtacctagggaaattagatattatggaaatattggtgttgtgtttatg
aggtgggatgatccaagagatattggttttcaagatggtgctagaagaatcttcattgat
ggaaaagattcaattttatgtaactttaatgatgattatagagagttttcatatgaagga
gaaattcacagaattaaacttggaacacctacaagagaattgtacataaacgaaaaatgg
tatgaatgctattttggtggtcgaccaattactattgacttaggcaataaaaaaattagt
atgaaattggatgggcctcctcctcaagtaaaaatcggaaatcttaaacgtactgatctc
gttatcggaaaaatcaatctaattattaatgcaagaaatatggtaccagtttttcttgat
tccaaacctcaagtatttgaaatcgatgggaagccatgcacactggagttcacagatgcc
ttgcaaacagttctcctgaatgggcgtcctttcaaagtcgaatttggtggactgcctaag
cctataatcattcaaaataagaaacacttcatacgattttccgtactgccacgtggcttt
catgctggctatgttaagatcacaggtatgaagggtgaacaaccaaaagaggccccagta
aatgatacattgttagaaactagtcaaaaaatggagtcaattacgacaacatgtgaagac
aagacgagtctgaatgtaccatcagatcttgatcacgattcaatattacttgacgatatg
gatgtagcaataaacagcaaaccagatttacagttagatgtactatcatcggttgttcca
tcagcaatggcaccatcgtctggattatcttaccaagctgaacctgttgaaaattcacct
acaactgtaccagcacttacattgccacttaatcttaatgaattattccaaagattagtt
gaaactgggattgttccaaatcttgttgagacaaagaaacaagaagaagaagaagagaaa
aagcaactagaaattattctaatttcatttgataaaccagagacattaaaaataaaacaa
cccattattgtaatggcattgtatagtggtatgcaatgtagttcatgtggagcaagattt
gctccagaaatggctactcgttatagtcatcatttagattggcactttcgacaaaatcgt
aaagagcgagatttggcaagaaaagcacattcgagaccatggtactacgatgtcagcgat
tggattcaatttgaggaaattgaagatctcgaagacagagcacaaaattggtttgaaaca
gaaaaacaaacagctgaaactgaaagtatatcagtggaagatgttcttcaggaaacgcaa
ttacctagtgttcccactggatcagatgaagattcatattgtgaagtatgtcatgaagca
tttgaacaattttataatgaagaaaaagaggaatggcaccttagacctaccatttgcttt
gaagacaaaaactatcaccctttatgtcttgaagaccacaaaagtgctttggaaaaatca
gcaatggtacttgaagaggctataactgaaatggaagaagaaacaaaaaaagaagatgaa
cttaaaaaaatagaaagaaatataaaaaaagaaatcaaagataaattaataatagaatta
aaaccaaaagagaataatagtaaagaaaaagaaaaaatggatgccgaaattgttgatatt
caaaaagaggaaaaaatagaagatatagatgattcagagccaattgaaattattgaaccg
cttccaagaaaaattgagcttgaagaaataaatgactcttcagatgatgaaacaattgaa
gaaatgaaaaaggaacatagaaaaaatttattaagtgacacaataattaagacacaagaa
tacaacgcatatgaaaagagaattgaagaaaaaatagcagataatgttccattaatattt
gaaaatgttaaaataaaagaagaacctattgaatatgaaatagaacttgaggagagtata
gctgaggctgcagctgtagacacaacacaagttgcagtaaagagtactatcgacggcaac
gtggagctggactctgcaacgtcaacgatgccctctgcaccctctaaaatcaaaatcaat
attacaaaatctttaaatcatgtgacaaaggaacttgaagaaattaaggaaaaagataag
aaattaaatgagacttcaatggatcccgcacctgtgaagcttcttacacctgctgcaatt
aaatctacattgcaaggcaagaagttatcgatactaccgacagtagaaaaaggttatgaa
ctctcaggattgtgctcgattatgtaa

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