Ceratosolen solmsi marchali (fig wasp): 105360061
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Entry
105360061 CDS
T06056
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol04382
Cornified envelope formation
csol04512
ECM-receptor interaction
csol04518
Integrin signaling
csol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105360061
04518 Integrin signaling
105360061
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105360061
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105360061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csol04147
]
105360061
00536 Glycosaminoglycan binding proteins [BR:
csol00536
]
105360061
Exosome [BR:
csol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105360061
Glycosaminoglycan binding proteins [BR:
csol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105360061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105360061
NCBI-ProteinID:
XP_011495139
UniProt:
A0AAJ6VMM4
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MIQQRQQHAYNMQVSKRRHSDNRKYFWTPPTIACLYVLLINFISYLPVVQTVSCIDYKCN
CTGVKGDIGTPGIRGIKGPEGEPGEIGSDGPEGPKGEKGQYGEIGLTGEKGLRGEAGIQG
FVGKLGESGRAGPTGPRGPDGLDGCNGTDGQSGVPGYPGKHGERGPFGPPGLQGSPGDAG
EGGVNTKGVKGERGEHGLDGKLGIPGLTGLSGDDGYPGETGDMGVQGLTGLPGIQGDRGD
NIFGPKGELGEQGDRGEKGIAAVRGSTRKNTTARAGPTGPKGYKGEIGERGFKGEVGEKG
LPGYAGRDGLKGTKGEQGEDGPRGKQGVTGPAGPAGDKGQKGAIGYFGKQGPEGDKGAIG
DSGRQGSPGRQGAIGEKGEYIPELDEIIKGSIGTQGDIGLQGEIGPSGTPGDSGKIGYIG
PPGPPGPQGPSGNPGPKGTSVKGEQGDDGSPGPIGLQGSIGLSGDVGLPGEKGFPGISIT
GPTGRNGYSGMDGNDGPMGDRGEPGAPGPKGFSGVGTPIIGPPGEPGLPGIPGISGIYGR
KGNDGLDGFKGTRGDDCGICIPGINGEMGESGTPGFDGFQGAPGFAGLPGPRGFKGIQGQ
LGNAGGPGIPGQNGLPGIVGIQGPKGSPGRVTLPDSWHEQSLHGDKGDKGFPGPVGIRGI
RGIPGEVGNSGFDGPKGEKGEFGLPGEVGRDGEPGWDGVDGIKGDSAHISKINLKGNRGY
DGVLGSKGERGNSGLKGNRGDASQHDLLPFRGDKGIKGLRGDSGFEGFKGKVGDIGLRGL
VGLTGEQGAQGFSAEGPEGLKGYPGMPGEEGPRGVPGTPGIIGPEGTPGILGLKGDRGEV
GSIYYYGDIGAIGLKGEYGEVGNIGPPGIRGPPGKDGIKGLKGLKGSIGYSGYPGTPGFK
GPRGDSIQGWRGVPGAPGFPGQLGIIGEKGFKGIDGTFGFDGIKGVRGDTGPPGHTGSSG
DDGQPGYTGMDGQMGFPGVPGEDGDIGEVGDFGPIGWPGVIGEPGQLGSKGERGNIGFPG
LEGLPGIPGRSGLKGDRGILGLKGNNGEHSFSGPQGDVGESGFIGGRGSYGLPGVDGKPG
LPGLPGLSIDGSMGLKGIKGDYGYIGFNGTRGEKGDQGDYGFYGSKGEIGYEGKKGNIGI
SGRHGLSGFKGEIGTIGLPGAEGIKGQRGPDGDPGIIGRPGIPGDIGPPGLPGLPGPIGL
KGSIGEPGYPGFANATFGDRGNPGFNGLSGRKGERGSSGYIGTSGQKGERGECGKPGQDG
LPGYVGEKGVIGDIGPDGPPGLPGKFAEPGEIGNPGLDGRPGISGRHGFKGSPGDYGYNG
LDGVTGEPGISYSGPKGERGDQGPRGYIGYPGTVGLEGRPGLPGPKGSKGFQGEPGLSGF
TAKGEIGDIGLSGYSGRLGIQGQKGDDGLPGLIGVPGLKGERGDIGENGRSGPRGKSGRK
GIKGDAGYYILQPKSEKGIIGSIGYIGLSGERGLSGIMGKKGKDGLHGRKGEPGESGLPG
APGITGMNGSDGTEGLRGPLGLPGLQGYPGNPGAPAPFGPEPRNRGFHFARHSQSAMIPV
CPKNTIKLWDGFSLLHIMGNSYAHAQDLGAAGSCVKKFSVMPFMFCNLNNVCDYANRNDY
SYWLSSNEQMPMSMTPIPSREVGSYISRCSVCEAPTRLIVLHSQSMAVPECPGGWEELWI
GYSFLMHRDAGAAGGGQALSSPGSCLEEFRARPFIECRGLGTCNFFSTAVSYWLVTVKDY
EMFRKPLQQTLKTDHTSRVSRCAVCIRRRVTESPVDRNRYAHISSHNDLRQPTAKYYAEN
TSNEIEINPENQSYYYQHQRNSTTNWLKSKQHQEQYSSRHYPYRRPQARLKWRSQNHKP
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatacaacaaaggcaacagcacgcctataatatgcaagtctcaaagcgcaggcacagc
gataaccgtaagtacttctggactccaccgactatcgcctgcctctatgtcctgttaatc
aacttcatcagctacctgccggtagttcaaactgtgtcatgtatcgactacaaatgcaat
tgcacgggtgttaagggtgacatagggacacctggtataagaggtataaaaggcccggag
ggtgagcctggtgagattggttctgatggacctgaaggacctaaaggtgaaaaaggacaa
tatggagagattggtctaactggagaaaagggccttcggggtgaggcgggaattcaagga
tttgtcggtaaacttggagaatcgggaagagcaggccccacagggcctcgagggcctgat
ggccttgatggttgcaacggtacagatggtcaatccggtgtaccgggttaccctggaaaa
catggtgagcgaggtccttttgggccacctggtcttcaaggctcacctggtgacgccggt
gaaggtggggtcaatactaagggcgtcaaaggagaacgtggggaacatggactcgacggc
aaattgggaattcctggccttaccggactttcgggtgatgatggatatcctggtgaaacg
ggtgatatgggtgtacaaggattaacaggactccccggtatacaaggagatcgaggtgat
aacatatttgggcctaagggtgaactaggtgagcaaggtgaccgaggtgagaaaggtatt
gctgcagttcgaggaagtaccagaaagaacacaacagctcgtgcgggtcctactggacca
aaaggttacaagggtgagataggagagcgtggatttaaaggcgaagttggtgaaaaagga
ctgccgggttacgcaggacgagatggattgaaaggaacaaaaggcgagcaaggggaagac
ggtcctagagggaaacaaggagtaacaggaccagctggtccggccggagacaaaggtcaa
aaaggagcaattggatactttggaaaacagggacccgaaggagacaaaggtgcaattgga
gatagcggaagacaaggttctcctggaagacaaggcgctatcggtgaaaagggtgaatat
attcccgagcttgatgaaataatcaaaggcagtattggtactcagggtgatattggatta
caaggagaaataggaccctcgggaacacctggtgattctggaaaaattggatacattgga
ccaccaggacctcctggaccgcaaggtccatcaggaaatccaggacctaaaggaacatct
gttaaaggagagcaaggagatgacggttcccccggaccaattggattacaagggtcaatt
ggattatcgggagacgttggcttaccaggtgaaaaaggtttccctggaatcagcattaca
gggccaacgggtagaaatggttattctggtatggatggtaatgacggaccaatgggagac
cgtggtgaacctggagctccaggccctaaaggattttctggcgttggcactccaattatc
ggtccaccaggagaaccaggtctacctggcatacctggaatatcgggtatatatggaaga
aaaggtaatgatggactggatggatttaaaggtactcgtggtgatgattgtggtatttgc
atcccaggaattaacggtgagatgggagagtcaggtacaccaggtttcgatggatttcag
ggtgcacctggtttcgcgggtttaccaggacctcgaggatttaaaggcatacaaggtcag
ttaggcaatgctggtggtccaggtattcctggtcaaaatggtcttcccggaatagtaggc
attcaaggcccaaaaggttcacctggccgcgttacattgcctgattcttggcatgaacaa
tctttacacggcgataaaggagacaaaggttttcctggtccagtgggtataagaggtata
cgtggaattccaggtgaagtaggaaattcaggatttgatggtccaaaaggagaaaaaggt
gaatttggtcttcctggagaagttggtcgtgatggtgaacctggttgggatggagtagat
ggaataaaaggagactctgcacatatatctaaaattaatcttaaaggaaatagaggttat
gatggagtattaggttctaaaggtgaaagaggaaattctggtttaaaaggaaatcgaggt
gatgcttcgcaacacgatttgctaccttttcgaggtgacaagggcataaaaggattaaga
ggagatagtggatttgaaggttttaaaggtaaagtaggtgatattggtctgagaggactc
gttggtttaactggcgaacaaggtgcacaaggtttctcagctgaaggtccagaaggttta
aaaggatatcctggaatgccaggagaggaaggtcctcgaggagtacctggaactccgggt
ataatcggtccagaaggcactccaggtatacttggtttaaagggagatcgtggtgaagtc
ggtagcatttattattatggtgatattggagcaatcggattaaaaggtgaatacggtgaa
gtgggtaatattggacccccaggtatccgaggaccacctggcaaagatggtataaaaggt
ttaaaaggccttaaaggatcgattggatatagtggatatcctggtacacctggatttaaa
ggaccgcgaggtgacagtattcaagggtggagaggagtacctggtgcccctggatttcct
ggacagcttggaataattggtgaaaagggcttcaaaggtattgatggtacctttggattt
gatggaataaagggtgtacgtggagatacaggtcctcctggtcatacaggttctagtggt
gatgatggtcaaccgggttacacgggtatggatggtcagatgggatttcctggtgttcct
ggtgaagatggcgatatcggtgaagtcggggactttggtccaattggttggccaggagta
attggtgaacctggacaattgggatctaaaggcgaaagaggaaatatcggttttccggga
cttgaaggattacccggcataccagggcggtcgggtctcaaaggagatagaggaatttta
ggactaaaaggcaataatggagaacactccttcagtggaccccaaggtgatgtcggagaa
tctggtttcattggaggaagaggatcgtatggtctacccggagttgatggaaaaccgggt
ttacctggattacctggattatctattgatggatctatgggattgaaaggtataaaagga
gattatggatatattggatttaacggaactcgcggagaaaagggagatcaaggtgattat
gggttttatggatcgaaaggcgagataggatatgaaggtaaaaaaggtaacataggtatc
tctggaaggcatggactttcaggatttaaaggcgaaataggaaccataggtttgccgggt
gcagaaggtattaaaggacaacgaggccctgacggtgatcctggtataataggacgtcca
ggaatcccaggagacataggcccacctggtttgccaggtctaccaggtcctattggttta
aaaggatcgattggtgagccggggtaccccggatttgcaaatgcaacttttggagataga
ggtaaccctggatttaatggattatcaggtagaaaaggtgaaagaggtagctcaggatac
attggaacttcaggacaaaagggtgaacgtggtgaatgtggtaagcctggacaagatgga
ttacctggctatgttggagaaaaaggtgtgattggcgatataggcccagatggtcctcca
ggattaccaggtaaattcgctgaaccgggagaaattggtaatcctggtctagatggccga
cctggtatatcaggccgccatggtttcaaaggctctccaggcgattatggatacaatgga
ctagatggtgttacaggagagcctggtattagctattctggaccaaagggagaacgaggt
gaccaaggaccacgaggatatattggttaccctggaactgtaggccttgaaggaagacct
ggtctcccagggcctaaaggatctaaaggtttccaaggtgaacctggcctctcaggtttt
actgccaagggtgaaattggtgatattggcttatctggatatagtggtagattaggaatt
cagggacaaaaaggagatgatggattgcctggtttaataggagttcctggattaaagggt
gaaagaggagatatcggtgaaaatggtcgatctggtccgcgagggaaatcaggtcgaaaa
ggtataaaaggtgatgcaggttattatattcttcaaccgaaatctgaaaaaggaataata
ggttccattggttatataggattatcaggtgaacgaggtttatctggaattatgggaaaa
aaaggaaaagatggcttacatggtcgaaaaggagaaccaggtgaatctggacttcctggt
gctccaggaataaccggaatgaatggatcagatggtacagaaggtttacgtggaccatta
ggtttgcctggactgcaaggataccctggtaatcctggagcacctgcaccattcggtcca
gaaccacgaaatcgaggatttcattttgctagacattcgcaatctgcaatgattccagtt
tgtccaaaaaatacaatcaaattgtgggatggattttcacttttacatatcatgggtaat
agttatgcacatgctcaagatctaggtgctgctggaagttgtgtaaaaaagttttcagta
atgccatttatgttctgcaatttaaacaatgtatgtgattatgcaaatcgaaatgattat
agttactggctaagttctaatgaacaaatgccgatgtcgatgacacctataccatctcgt
gaagtaggttcatatatatcacgttgttcagtctgtgaagctcctacgcgtcttatcgtc
ttgcacagtcaatccatggcggttccagaatgtcctggtggttgggaagaactttggatt
ggttatagttttcttatgcaccgagatgctggtgcagcaggtggaggccaagccctttcc
tcaccgggttcctgtctcgaagaatttcgtgctagaccttttattgagtgccgtggcctt
ggcacatgtaactttttttccactgctgtttcatattggctagtcaccgtgaaggattac
gaaatgttccgcaagccacttcaacagacacttaagaccgatcatacctcacgcgtctct
cgttgcgctgtgtgcattcgacgacgtgtgactgaatcgccagtcgatcgtaatcggtac
gcacacattagtagccacaacgatctgcgtcaacccacggctaaatattatgcagagaac
accagcaatgaaattgaaattaaccctgaaaatcaaagttactattaccaacatcaacgc
aattccacaaccaactggttgaagtcaaaacaacatcaggaacagtactccagtaggcac
tatccatataggcggccccaagcgcgcctcaaatggagatcacaaaaccacaagccttaa
DBGET
integrated database retrieval system