Ceratosolen solmsi marchali (fig wasp): 105360404
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Entry
105360404 CDS
T06056
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csol03009
]
105360404
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105360404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Uds1
Motif
Other DBs
NCBI-GeneID:
105360404
NCBI-ProteinID:
XP_011495601
UniProt:
A0AAJ6YCP0
LinkDB
All DBs
Position
Unknown
AA seq
2788 aa
AA seq
DB search
MKTKPTKHKETNTFKFKPFLERVNEIDIDVFHKVAHFNEIVHNETETYFYQCVQKWNFLN
LSENYCNFRKEVVDIITLPQLLNKKQHVIDTLLKYLKLKDPLCLYSIFELTIAVVKDLQL
DFYPYFPEFLASITSLLYTKDAEQLEHTFTTLAYLFKFQWRYIIKNVDKVFDILVPLLAD
TYPPYVNNFAAESFAFVVRKVKEKEAFLKLVLQTLEVRRDGVAGCGKLLFHVLSGIAGQF
HSCTETILTLYINALLNPLINQQLLIEVLSTVFSCIAHEINPNKCDIFWTVIFKEIDAFS
DNSLVSLLQLIQIVINYKGGQMLKDSLIWSKKLCEMIDKYQNSRGVLQEIINAVTVTLLA
SNITLLQETSSFLIIKLLSINDQDLLIQITEKLITYSAFESLVLPQILKKSIFSTMDEKM
LQLLAKIIEAKSPPILCGINFDKWIKFNLDIRCMDSTIFLTKILDSLKERDITEDALKVL
IILPHLTHLQEQLRLKLIEIFVFLFKRVLQEKHHRQRVNFSFILTMESVIHIMKPDDFHC
LISEHVSWNNDLLSALNLHQNDISVLNALDLGLTYLKNSNHSEEYFNKINFDKLHQTLAS
KLGSMNPIIRLTTSHIYSLFSNMPGLNHFTNSMDRSANNADFKNAFELPYLVESEPITLH
KYRERLQGLRALDFRGAAISRLDANYKDAPLHYLFGNLYINFSLLWDPVCEVLISYATDE
CSQFWPLFLSKLKNENKLEVTPEVPFFECDILSNMISRLFSSSDKVDHDNYTFLLWKCMH
QIVNYCEVKNRDFVGVFIDFVDCHFFKSDSEDAKSCNILKREQEINSNDEQEKVKEEDND
DDETKEEVKGEDNDDDETKEEDQINNEKECASEQKEFHSKLTRTKSVKLLLAMLQTFGKF
TNTRSLYREPEIQKIYLDLLSSKNSEIQKASLACLYTYKHKYLMPYKDHLDNIVDEKNLK
NELIRFQISVDEANQIVLRDEHREDLMPIIMRILHAKMMQKVGMRTGGKSGGLVKRKTIL
RFLAGVKEEEMMIFVRMAFRPFQNYLPILTANKENQSKTDLRQMVHDIINNINLEAVIPP
KRLQSIVNLLSVIIEQFGGKMMEKLLPHLFALLICVLAHISAILSKTNKVHSNYLMPIRN
ARNNSINILARFFIHFEDYDWSSSEIDALFDVAVFPWIQKLPIEGIHTPTPLLKMMAAWS
KNPRYYSLFVKLNEDKETPLIFLVKLLLFERTHRCVLQTLLDMFEKMLTFQDFEREDPDR
IDVDEFKPKSMLPIVCNKLDIVKDESINYGSAILLPHITDILKFFERNLKKHSRHITNRT
ELIILSRISEFVLDPKTCNTLLILILPILQKKCRDSEETVVQLLTTIINLIKYVEKPELH
LRSIQHFLFQIKSASSRKILMEILNIVVKNNETMKKNQAVLMNLNAYDQRWIDQPDYEKR
LNAFEEIDRLIKANEITLEFGVGVILNCFFFLKTDNDLAIRDRSGQCLKVIGVYLAKKFK
DSAIDRKYLLEETILTIVRYGIRSKVENIKFQSIAFIGHMAMECPDVHPVLKDLHTLTNK
QDPEVDFFENMQHLQLYRRSRAFLKFCKIARSMTKAPNSRTLTQFILPLCSSYLCNEKYI
HKNSLIDTAIETIGVVCQLLPWNQYEIVLRFYLVKLRMCTEFQRQIIRIVVAILDSFHFN
LSKYKEVEELSKEHSSLNLTVPIANTTANVLPKPSEELPSDKSLKPNEVDINETQNTEEI
MIEHLDEALNSNSIIDNIDNIVEQVEEDATKDVPAVEKQTMLTQHMAKRLVYSISKDLLP
QLHKAIASRTRYEGSHKVNKKRVSNELEEEELMRVPIALAMVKLLQKLPHGILEANLRGI
FMKICTFLKSRLESVRRTTREILQSIMITLGPDYLHYLLKEMNTLLTRGFQVHVLAFTIH
AVLITLKPFFKPKHISLNLASILSVCKIDLFGPSSEEKEVAGIVRNVSEAKCTKSFEIFH
VLGEFVDEAAIIDVVVPLKDVLIRTRSHKSIRKIVESLRRLSLGLADNKYIEINELLNFL
HGVSSESIPQLMPENLKEKETVQEKTLKNVIKKPDCFLIPPAPKTKMGIKISAKTSKNTN
AHIMIEFSLRLFHILLKRDKVAKPELKPLLDRFVPVLSDCLNSQYVKLSALALQCLNWIL
KVDLPLVRTCTVQISTSIFNILHKYAVAGLSKGDNFDLVMAAFKCMSVLVRDVKHFVVKS
DQLKVLLMYAEQDLYDSDKQATAFGLLKAIIHRKLFISEMHQVMENVATLSITSELDNVR
KQARAVFYSYLMNYPLNKRLKRHISFYATQLGYELQPGRLSALEMIYAIVTSFPLEILIE
YSGFLFLTVGARLINDDDPICKKVCATCINEIIDRIPHNPRNKLFNSIILWLKDKKIAHR
QLAVQLCGIFVMVEKEGFEPRLKEILPLLTKQFYSDENFDDNDQCGRFVKVHKEKNHDIQ
SKNIKDPTKLKDHLFYQVLQLLLKICTNCHTFLKNEQYTEYVNTFAEYSQSLLAHPHLWV
RLAASQMLGFVLAALNVEKVIHLINNPADCNFDDGYIYSNPIEQLRSLILDSIAQLQPDT
DFEELYDQIIKNLIFISKLLTITKTDQDDSSEQDENNKNSISLLWLLKRLRKCINYEISQ
APKSTIIRSSVFKWMAGVIVMMEIDSLKPILFQFMSPLVREMATIEESNAPLRQLAKQVA
TMIKKNMNIEDYTRLLSQSQQRIDMKKAERKKTRLQQVVIDPEIAAKRKISKQLKKKVAR
KRKIETLAGKRGTRKKVKKEVDFDLEEM
NT seq
8367 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaagccaaccaaacataaagaaactaatacttttaagtttaaaccatttttg
gagagggtaaacgaaatcgatatcgatgtctttcataaagttgcacattttaatgaaata
gttcataatgaaactgaaacatacttttatcaatgtgttcaaaaatggaattttcttaat
ctttccgagaactattgcaacttcaggaaagaagtggtagatataattactttaccacaa
ttacttaataaaaagcaacacgttatcgatacgctactgaagtatttaaaattaaaagat
ccattatgcctctattcgatttttgaattaacaattgccgtggtcaaggacttgcaatta
gatttttatccatactttccagaatttttagcaagtattactagcttattatatacgaaa
gatgctgagcaacttgaacatacttttaccacgttggcctatttatttaaatttcaatgg
cgttacataatcaagaatgtagataaggtctttgatatacttgtcccgttattagcagat
acgtatccaccttatgtaaataattttgctgccgaaagttttgcttttgtggtacgaaaa
gtaaaggagaaagaggcatttttaaaactagtacttcaaactttggaagttagacgagat
ggagtggctggctgtggaaagttattatttcatgtactttctggtattgcgggtcaattt
cattcatgtactgaaactattttaactttatacattaacgctttgttaaatccattaata
aatcagcaacttcttatcgaagtactgtctacggtattttcctgtattgcgcatgaaatc
aatcctaacaaatgtgatatattttggactgtaatttttaaagaaatagatgcattctct
gataattcattggttagtttattacaattaatacaaattgtaataaattataaaggtgga
caaatgctcaaagattctttaatttggtctaaaaaattatgtgaaatgattgataaatat
cagaatagtagaggagttttacaggaaattattaatgctgttaccgtaactcttcttgca
tcgaatataacattattgcaagagacttcaagttttttaattataaaactgttatctatc
aatgatcaagatttattaatacagattactgaaaaacttattacgtattcagctttcgaa
agtctagtattgccacaaatattgaagaaaagtatattttctaccatggatgaaaaaatg
cttcaattgttggcaaaaattattgaagcaaaatctcctccaattctgtgtggtataaat
tttgataaatggattaaatttaatttggatattcgttgcatggatagcactatatttcta
acaaagattttggattctttaaaagaacgtgacattacagaagatgctttgaaagtttta
attatattaccacatttgactcatttacaagaacaacttcgtttaaaattgattgaaatt
tttgttttcttatttaaaagagtattacaggaaaagcatcaccggcaaagggtaaatttt
tcatttattttgacaatggaatctgttattcatattatgaaacctgatgattttcattgt
ttgataagtgagcatgtttcttggaataatgatttattgtcggcattaaatttacaccag
aatgatatttcagtactaaatgctttagacctcggtcttacttatctcaaaaattcaaat
cactccgaggaatatttcaataaaattaactttgacaagcttcatcaaacattggcttcg
aaattaggttcgatgaatcccattattcgactgaccacatcgcatatatactcattattt
tcaaatatgcctggcttgaatcactttacaaatagtatggatcgttctgcaaataatgca
gatttcaaaaatgcatttgaattgccgtacctagtggaaagtgagccgataacgcttcac
aaatatcgagaaagattacaaggtttacgggctctcgactttcgaggtgccgctattagt
cgattggatgcgaattataaagatgctccactgcattatctctttggcaatctttacata
aacttttcactgttgtgggatcccgtttgcgaagtcttaatatcatatgctaccgacgag
tgctcgcaattctggccgctttttctctcaaagttgaaaaatgaaaataaactggaggtc
acacccgaggtaccattttttgaatgcgatatattatccaatatgattagtcgacttttt
tcttcttctgataaagtggatcacgacaattacacattcttgctatggaagtgtatgcat
cagattgttaattattgcgaggtaaagaatcgcgactttgtcggtgtattcatcgacttc
gttgattgtcattttttcaagtcggactcggaagatgccaaatcttgtaatatcttgaaa
cgagaacaagagatcaattccaatgacgaacaagaaaaagtgaaagaggaagataatgac
gacgatgaaacaaaggaagaagtgaaaggggaagataatgacgatgatgaaacaaaggaa
gaagaccaaataaataatgaaaaggaatgtgcaagtgaacagaaggaatttcattctaaa
ttaacgagaacaaaatctgtcaagcttttactggctatgctacagaccttcggtaaattc
accaatactcgttcgctctatcgcgaacccgagatacaaaaaatctacctcgatttactc
agttcgaaaaattcggagattcagaaagcctcactcgcgtgtctttacacttacaagcac
aaatatctcatgccttacaaggatcatctggacaatatcgtcgacgaaaagaacttgaag
aacgagcttattcgctttcagattagcgtcgatgaagctaatcaaattgtcttgcgagat
gaacatcgtgaagatctcatgcctattataatgcgcattttgcatgcgaagatgatgcaa
aaagtgggaatgagaacgggcggaaaatctggcggacttgtcaaaagaaaaaccattctt
aggtttctagctggtgtaaaagaggaagaaatgatgatatttgtaagaatggccttcaga
ccatttcaaaattatctgcccatattaactgctaacaaggaaaatcaatcgaaaacagat
ttgcgacaaatggtacacgacatcattaacaatataaatctagaggctgttattcctccg
aaacgtttacaaagtattgtaaatttattatctgtgataattgagcagtttggtgggaag
atgatggagaagcttttgccccacttgtttgctctacttatatgcgttctggcacatatt
tctgcaatacttagtaaaactaataaagtgcactccaattacctaatgcccattcgtaat
gcacgtaataattccattaatattttggctcgattttttatacattttgaggattacgat
tggtccagctcggaaattgatgcattattcgatgttgcggtatttccatggatacagaaa
ttgccaatcgaggggatacataccccaacgcctttattaaagatgatggcagcttggagt
aaaaatcctcgatattattcgctgtttgtcaagttgaatgaggataaagaaacgccgtta
atttttctagtaaagctattgttatttgaaagaacacacagatgcgtattacaaacgctt
ctcgatatgtttgaaaaaatgctgacattccaagattttgaaagagaagatccagatcga
atagatgttgatgaatttaaaccaaaatctatgcttccgatcgtttgtaataaactagat
atcgttaaagatgaatcaataaattacggatcggcaattctgcttccgcacattaccgat
atccttaaattttttgaaagaaatttaaagaaacactcgagacatattaccaatagaact
gaattaattattctttcacgtatttctgaatttgttttggatcctaaaacatgtaacacg
ttattaatccttattttgccaattctccaaaaaaaatgtcgcgattccgaggagacagtc
gtacaattactgactacaataataaatctcattaaatacgtagaaaaaccagaattacac
ttaagatcgattcagcactttttattccaaattaaatcagcgtcatcgagaaaaatttta
atggaaattttaaatattgtggttaaaaataatgaaacaatgaagaaaaatcaagcggta
ttaatgaatttaaatgcttatgaccaaagatggatcgatcaaccagattatgaaaagaga
ttaaatgcctttgaagagattgacagattaattaaggcaaacgaaataaccctggaattc
ggcgttggtgttatcctcaactgtttctttttcttaaaaaccgataacgatttagctata
agggatagatcgggtcagtgcttaaaagtaatcggtgtttacctggctaaaaagttcaag
gactctgcgattgaccgaaaatatcttttggaagaaacaattttaacaatcgtcagatac
ggtatcaggagcaaagttgaaaatattaaatttcagtcaatagcttttatagggcatatg
gctatggaatgtcccgatgttcatccagtattgaaagatttgcatacgttgactaataaa
caagatccagaagtcgatttctttgaaaatatgcagcatttacaattatatcgaagatcc
agagcttttctgaaattttgcaagattgcgagaagtatgacaaaagcgccaaactcgaga
acactaacgcagtttattttaccattatgttcctcatacttatgcaacgaaaaatatata
cacaagaacagtttaattgatactgcaatcgagacaattggagttgtatgccaactgttg
ccctggaatcaatacgagattgttttaagattttatcttgttaaattgagaatgtgcacg
gaatttcaaagacagattattaggatcgtggttgcgattttagattcttttcattttaat
ttatcaaagtacaaagaagttgaagaattgtcaaaggaacacagttctctaaatttaaca
gttccaatcgctaatacaacagccaatgtgctaccgaaaccatccgaagaattaccatct
gataaatcattgaagcccaatgaagtcgatatcaacgaaacgcagaatacagaagagatt
atgattgaacacctggacgaggctctaaatagcaatagcattattgataatattgataat
atcgtagagcaagtagaggaagatgccacaaaagatgtaccagctgtagagaaacaaaca
atgcttacgcaacatatggcgaaacggcttgtatacagtatttcgaaagatttgctaccc
cagcttcataaagcaatagcgtcgaggacacgttatgaaggaagtcacaaagttaataag
aaaagagtcagtaacgaactggaggaggaggagctcatgagagttccaattgctcttgcc
atggttaaattattgcagaaattaccccacggaatacttgaagcgaacttacgtggaata
ttcatgaagatttgtacattcttgaaatctcgtcttgaatctgtgcgtcgaacaactcgt
gaaatcttgcaaagtattatgattactttgggcccagattacttacattatttactcaaa
gaaatgaatactttactaacccgtggctttcaagtccacgtacttgcatttactattcac
gctgtacttattacgttaaagccattttttaaacctaagcacataagtttgaatttagca
agtattttgagtgtttgcaaaatagacttgtttggtccatcatcggaggaaaaagaagtc
gcgggcattgtgagaaatgtatctgaagcaaagtgtacaaaaagcttcgaaatttttcac
gtattaggagaattcgttgacgaagcggctataatcgatgtggtggtaccgttgaaagat
gttctaatacgtactcgttcgcataaatctataagaaaaattgtcgaatctctccgacga
ttaagtttgggattagcggacaataagtacattgaaataaatgaattgttaaattttttg
cacggtgtgagttccgaaagtattccacagctcatgccagaaaacttaaaagaaaaggag
actgttcaagagaagacattaaaaaatgttataaagaagccggattgttttttaattcct
ccagcgccaaagaccaaaatgggtataaagatttcggctaagacttccaaaaataccaat
gcgcacattatgatcgaatttagtttaagactctttcatatcttgttgaagagagataaa
gtcgctaaacccgaattaaaacccttattagatcgttttgtaccagtattgagcgattgc
ttaaactcacaatatgtgaagttgagcgcattggcactacaatgtttgaattggattctt
aaagttgatcttcctcttgttcgcacctgcacggtacaaatttctacttcaatatttaat
attttacacaaatatgctgttgctggattgagcaaaggcgacaatttcgatttggtgatg
gctgcattcaaatgcatgtccgttcttgtgagagatgttaagcattttgttgtaaaatcg
gatcaactcaaggtattactaatgtatgcagaacaggacttgtatgacagcgacaagcaa
gctacagcttttggcttacttaaagccataattcatcgtaaactttttatatctgaaatg
catcaagtaatggaaaatgtggcaacattgagcattacttcagaactagataatgtcaga
aaacaggcgcgtgctgttttttattcatatttaatgaactatccgttaaataaacgtttg
aaaaggcatatatcattttacgcaacccaactgggatacgaattacagcctggaagacta
agtgcactggaaatgatttacgcaattgttacaagttttccattagaaatacttatagaa
tactcaggtttccttttcttaacagttggtgctaggcttattaatgacgatgatccaatt
tgtaaaaaagtatgcgctacatgcatcaatgaaattatagatcgtattccacataatcca
agaaataaactttttaatagcattattttatggttgaaagataaaaagatagcacacaga
cagttggcggttcaattgtgtggtatttttgtaatggtagaaaaggagggtttcgaaccc
cgacttaaagaaatcttgcccctcttaacaaaacaattttacagtgatgaaaactttgat
gataatgatcaatgcggtcgttttgtcaaagtacataaagaaaaaaatcacgatatacaa
agcaaaaacataaaagatccaacaaaattgaaagatcatcttttttatcaagtactacaa
ttattattgaagatttgtacaaattgtcatacgtttttaaaaaacgaacagtatacagaa
tacgtaaatacatttgcagaatacagtcagtcattattggcacatccccacttgtgggta
cgattagcagcgtcgcagatgcttggttttgttcttgctgctcttaatgttgagaaagtc
attcatttgataaataacccagcagattgtaatttcgatgatggatatatatactctaat
ccaatcgaacaactacgaagtttaattctagattctatcgcacagctacaaccagataca
gactttgaagaactttatgatcaaattattaaaaatctaatttttatatcaaagctttta
acaattacaaaaacggatcaggacgattcttctgaacaagacgaaaataataaaaattcc
atatctctactttggcttcttaagaggttgaggaaatgtataaattatgaaatatctcaa
gcaccaaaatccactattatcagatcttcagtttttaagtggatggcgggtgtaattgta
atgatggaaattgattctctcaagcctatactttttcaatttatgtctcctttggtaaga
gaaatggccacaatcgaagaatccaatgctcctctgcgtcaattggcgaaacaagttgcg
acgatgataaagaaaaacatgaatattgaagattacacacgtttattgagtcaatcacaa
cagagaatagatatgaaaaaagcagagaggaagaaaactcgtttacagcaggttgtgatt
gacccagagatcgctgctaaaagaaaaatttcaaaacaattgaagaaaaaagtggctcgt
aaaagaaaaattgaaactttagcaggtaaaaggggcacacgaaagaaggtgaaaaaagag
gttgattttgatttggaagagatgtaa
DBGET
integrated database retrieval system
