Ceratosolen solmsi marchali (fig wasp): 105360462
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Entry
105360462 CDS
T06056
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105360462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csol03041
]
105360462
03009 Ribosome biogenesis [BR:
csol03009
]
105360462
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105360462
Spliceosome [BR:
csol03041
]
Complex A
U2 snRNP components
U2 related factors
105360462
Complex B
105360462
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105360462
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
90S particles
Helicases
105360462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ResIII
ABC_tran
AAA_30
T2SSE
AAA_7
AAA_16
TsaE
AAA_25
Motif
Other DBs
NCBI-GeneID:
105360462
NCBI-ProteinID:
XP_011495664
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYVKRKTTTVNNVATTAGPTMTQKNQVQLNPYTGLPYTARYHEFYKKRIT
LPVFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSRSIGTKAVACTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSAKTILKYMTDGMLLREGMSDPMLEAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRSDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPERDYLEAAIRTVIQIHMCEEVPGDLLLFLTGQEEIEEACKRIKREMDSLGP
DVGELKCIPLYSTLPPNLQQRIFELAPPTKPNGGIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQENT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNEAKKAADEAKMRFA
HIDGDHLTLLNVYHAFKQNQEDPQWCYDNFVNYRSLKNGDNVRQQLSRIMDRFQLKRTST
DFTSKDYYINIRKALVNGFFMQVAHLERTGQYLTIKDNQIVQLHPSTCLDHKPDWVIYNE
FVLTTKNYIRTVTDIKPDWLLRIAPQYYDLQNFPQCEAKRQLEVIQARLDSKQFQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggaggatcgaggtcgtcgatccgtacgtcaaacggaaaactacaacggtg
aataatgtagcgaccacagctggacccactatgacacagaagaatcaagtgcagttaaat
ccatacactggattaccgtacacagctcgttaccatgagttttacaagaagagaattacg
ctgcctgtgtttgagtacagagccgactttatgcgtctcttggctcaacatcagtgcatc
gtcctcgtgggcgaaacaggctctggaaaaacaacgcagataccacaatggtgcgtcgag
tattcgagaagtatcggtacaaaggcagtagcttgcacacagccgaggagagtggcagcc
atgtccgttgctcagagggtgtcggaagaaatggacgttgcgttaggtcaggaagttggt
tacagcattcggttcgaggactgcagctctgcaaaaacgattctcaaatacatgactgac
ggtatgctacttcgcgagggtatgtcagatcctatgctggaggcgtaccaagttatactg
ttggacgaggcccatgagcgcaccctcgccacggacctgctcatgggtgtcctgaaggag
gttataaagcagcgctccgatctcaaactcgtcattatgagcgccaccctggacgccggc
aaatttcagcagtacttcgacaacgcgcccctcatgaacgtacctggtcgcacccacccc
gtagagatattttacacgcccgagcccgagagggactacttggaggcagccatacgtacc
gttatccagattcacatgtgcgaggaggtgcccggcgacctgctcctcttcctcaccggc
caggaggagatcgaggaggcctgcaagcggataaagcgcgagatggacagcctcgggccc
gacgtaggcgagctcaagtgcatacccctctactcgaccctgccgccgaacctccagcag
cgcattttcgagctcgcgccccccaccaagcctaacggcggtatcggccgcaaggtcgtc
gtgtccacgaatatcgccgagacgtccctgacgatcgatggcgttgtcttcgtaatcgat
cccggcttcgccaagcagaaggtctacaatccgaggatacgcgtcgagtcactcctcgtg
tcgcccatcagcaaggcctcagcgcaacagcgggctggcagagccggcagaacaagacct
ggaaagtgcttccgactctacaccgagaaggcctataagaatgaaatgcaagagaacact
tatcccgagatcttaagatcgaatctgggcagcgtcgtactgcaactcaagaagctggga
atcgacgacctggtgcattttgacttcatggatccacctgctccagaaacccttatgcga
gcgttggaacttttaaattatcttgccgctttagatgacgatggaaatttgacagatttg
ggtgccgtaatggctgaatttccattagatcctcaacttgccaaaatgttgattgcctcc
tgcaatcataactgcagcaacgaaattctcagcattacagcaatgttgtcagtcccacag
tgttttgtaagacctaatgaagcaaagaaagctgcggacgaagcaaaaatgcgttttgca
catatcgatggagatcatcttacgctgttaaatgtatatcacgcttttaagcaaaaccaa
gaagatccacaatggtgttacgataatttcgtgaattataggtcattgaaaaatggtgat
aatgtaagacaacaattaagtagaattatggatcgatttcagttgaaacggacgtcaaca
gattttacttctaaagattattatataaacattaggaaagcacttgtaaatggtttcttt
atgcaggttgctcatcttgaaagaaccggtcaatacttaacaattaaagataatcaaatt
gttcaactacatcctagcacttgccttgatcacaaacctgattgggtaatttataatgaa
tttgtgttaactacaaaaaactacattaggacagtgacagatattaaacccgattggtta
ttgagaattgctcctcaatattatgatctgcaaaattttccacaatgtgaagcaaaacgg
caactggaagtcattcaagctagattagattcaaaacaatttcaagaaggtttttaa
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