Ceratosolen solmsi marchali (fig wasp): 105361085
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Entry
105361085 CDS
T06056
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03020
RNA polymerase
csol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105361085
09124 Replication and repair
03420 Nucleotide excision repair
105361085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105361085
03400 DNA repair and recombination proteins [BR:
csol03400
]
105361085
Enzymes [BR:
csol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105361085
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105361085
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105361085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
105361085
NCBI-ProteinID:
XP_011496490
UniProt:
A0AAJ6YEB1
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYAEEDQYEDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVED
SPQIDLQAEAQHTTGEIENPVRHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYS
APLYVDITKTIVKDGEEPVETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMMA
KSSANIKKSAIGQRIVAVLPYIIQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNVALNFIGTRGARPGVTKDKRIKYAKEILQKEMLPHVGISDFCETKK
AYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQK
FIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSEV
SMIRDIRDREIRIYTDAGRISRPLLIVENQTLLLKKRHIDMLKDRDYNNDGWQELVASGV
VEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIV
AILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSETKKFGDQEEQFEKPSRQTCQGM
RNALYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELDSTTKRFTKRDASTFLRNSE
TGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCEG
LTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLMEYGY
QLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGC
KNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctgaagaagatcagtatgaagatgaagatgcagaggaaatctcatctaaactg
tggcaagaggcctgctggattgttattaatgcttactttgatgaaaaaggtttggtacga
cagcaactcgacagtttcgatgaatttatcgaaatgtcagttcagagaatcgtggaagat
tcgccgcaaattgatttacaagccgaagctcaacatacaaccggggaaattgaaaatcct
gtaaggcatttagttaaatttgaacagatttatttgtctaagccgacgcactgggaaaaa
gatggtgccccatcgcctatgatgcctaacgaagctagacttagaaatttaacatactca
gcgccgctttatgtagatataactaaaactattgtgaaagacggggaagagccagtagaa
actcagcatcaaaaaacattcataggaaaaattccaattatgttaagatcaaaatattgt
ttacttgctggattgtcggatcgtgatttaacagaattgaacgaatgtccattggatcct
ggcggatatttcattattaatgggtcggaaaaggtattaatcgcacaagagaaaatggca
acaaatacggtatatgtttttagtatgaaagatggtaaatacgcttacaagtctgaaata
agatcatgcttggaacatagttctcgacctacttctacactatggattaacatgatggct
aagagtagtgcaaatattaaaaaatcagcaatcggtcaacgaattgtcgctgttcttcct
tatattatccaagagattcctattatgattgtatttagagcgcttggatttgttgctgat
cgggatatcttggagcatattatttatgattttgatgatccagaaatgatggaaatggta
aagccatcgttggacgaagcttttgtaattcaggagcagaatgttgcattgaactttatt
ggcacacgtggtgcaagaccgggtgtaacaaaagataagcgtatcaagtatgccaaagaa
attttacagaaagaaatgttgccccatgttggaataagtgacttttgtgagacaaagaag
gcgtatttccttggttatatggttcatagattactctccgcgtctcttggacgcagagaa
ctagacgatcgcgatcattacggaaataaacggctcgatttagcaggtcctctattggcc
ttcttgtttcgtggtttatttaagaatttgatgaaagaagttcgaatgtacgcccagaaa
ttcatagacaggggaaaagattttaatctcgagcttgcaattaaaacaaaaattataaca
gacggtttgagatattcgttggctacaggaaattggggcgatcagaaaaaggctcatcag
gccagagccggagtgtcccaggtattaaacagactgactttcgcttcaactttatcgcat
ttaaggagagtcaattcacctatcggtcgagacggcaagctagccaagcctcgtcaactt
cacaataccctttggggaatgttgtgtcctgctgagacaccggaaggtgctgccgtaggt
ttggttaagaatttagcccttatggcctacattagcgttggctcacaaccatcaccaatt
cttgaattcttggaggagtggtctatggaaaatttggaagagatcgccccaagcgctatt
gccgatgcgacaaaaatctttgtcaatggttgttgggttggcatacacagggatcccgat
cagctcatggcgacgcttagaaaattgagaagacaaatggacattatcgtgtcagaggta
tcgatgatcagagatattcgggatcgtgaaatcaggatatatacggatgctggtagaatc
agtaggccgctgctgatcgtcgaaaatcaaacgcttttacttaaaaagcgtcacatcgat
atgctgaaagaccgagattataataacgatgggtggcaggagctggtagctagtggagtg
gtcgagtatatcgacacgcttgaagaagaaactgtaatgattgcaatgtcgcccgatgat
ttaagacaggagaaagagtacgcatattgtacaacttatactcattgcgaaattcatcct
gccatgattttgggagtatgtgcttccattattccatttcccgatcacaatcagagtcct
agaaatacctatcagagtgctatgggtaaacaagcaatgggtgtctacataactaatttt
catgtgcgaatggacacgcttgcgcacgtgctctattatcctcacaagccgcttgtaacg
acgagatcgatggaatatcttagattcagagaattacccgctggtattaatagcatcgtt
gcaattttgtgctacactggctataatcaagaggacagcgttatccttaatgcaagcgcc
gtagagcgaggatttttcagatcggtcttttatcgctcttacaaggactcggaaacaaaa
aaatttggagatcaagaggaacagtttgagaaaccatctcggcagacctgccagggtatg
cgtaacgctttgtatgataaattggacgacgatggcataattgctcctggaatacgagtc
tcgggtgatgatgtcgtaattggaaaaacgatgaccttacccgaaaacgatgacgagctg
gacagcacgacaaagcgcttcacgaaacgcgatgcctcgacgtttcttcgtaacagtgag
accggtatcgtggatcaagttatgctaacactgaatagcgaaggttataagttctgcaaa
attcgtgtgcgcagcgtgagaatccctcagatcggcgacaagttcgcctcgcgacatggt
cagaagggaacgtgcggcattcagtaccggcaagaggatatgcctttctcttgcgaaggc
ctcacgcccgacattatcattaatcctcacgctattccctcccgtatgaccattggtcac
ttgatcgaatgcattcagggaaaggtttcatctaataaaggtgagatcggcgatgcgaca
ccgttcaacgatgccgtcaatgtgcagaagatctcgactctgctgatggaatacggctat
caattgagagggaacgaagtcatgtataacggccacacggggcgcaaaattaatgctcaa
gtttttttgggccccacttactatcaacgtcttaagcacatggtggacgataaaattcac
agtagagctagagggccggtgcagatactcgtaagacaaccgatggagggtagggccaga
gacggaggcttgcgatttggagaaatggaacgtgattgtcaaataagtcatggagctgct
caatttttgcgagaacgattattcgaggtttctgatccttatagaattcacgtatgcaat
ttttgtggtttaattgctatagccaatcttaggaacaacacatttgaatgtaaaggatgc
aaaaacaaaactcaaatatctcaaatccgattaccttatgctgcaaaacttctgtttcaa
gaactcatggcaatgaatattgcacctagacttatggttacttaa
DBGET
integrated database retrieval system
