Ceratosolen solmsi marchali (fig wasp): 105361320
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Entry
105361320 CDS
T06056
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105361320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csol03009
]
105361320
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
Pre-60S particles
RNases
105361320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
105361320
NCBI-ProteinID:
XP_011496752
UniProt:
A0AAJ6YET8
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MLPSTGYFKAINCPFYENGYCERPYCHFRHSRRDGASTSTVVALESTQTASKTQNADSPA
IATANSDVIQQLVSEAVKKVLADQNVKDTDNIISQVVEGLKPKLVPSVLSVAPNQESNSE
DPALSTHMGIPVIPSTSLPCVYNPTPIAELKKRHIPITAYEPTRESKAVKRKSPDVERPW
MDVIRNITCIKESKVSYTPTVINQALAVETNSVHNYVPTIKSETSLNLYDVNSSSNDSYI
PEKKKKKEIYYPKPKKRREEYVPRKPKVPLKTKQHLEEDSYDVLDEFLCGSKSNASIPVD
EESQDLLDIIPKFSDDDTTASADITKEEKKSDNIENKISQDEKENKELKKSDESNNRSYN
KNSNRLNKEKSNKHEESLRHSKEDVSKVKNRSSEKSSKEDSKHSKHKNNSKHSKNKDDDS
KHSKSKEENLKHSKNNEEDSRHGKSKQDDLKHNKNKERVEEKRDREKDKDKSKDKLKHGS
KSSEHSVSSSRVSRSKEKSTVKDNRNSKDSLHHSRKDSKSNKRKRSNSKDLKNSKKECKE
KSKHKSDEKSKHKSKSSSSDSKSKSSKQSHKSSNKHSSHKSKRSNNKSAAEREDSVSDKN
DEKSDRENKCYSPEYEEFSPFYDEQLLETSDSDHDVEEECRKIFQEYEISDHPKSVSNKA
PSRPEIEEPEEIFKKRVAHPSAISNMSKHVGPTQPPKRLPNPQQRMYERWRMMKEVAAEK
AAEKAAEKAAAEKAAAAAAAAAAAAEKASARKAFETTVQRKPLENNSLAPNDHQINGNGR
IRIAQVPYAMSLALEKKKVLEQAAKVETKTVAQNKKGSARVAHIPQVVPQLIRPEPLQIS
GTQKFPLNVRQFYVNAMQNICVQIYTNSDDAAQRAVREEFACYERCKAVNVYKNSCMLTV
HRLRKEVDQKSKESSAPHSGTISHEAVLAGKVKGSWSVIKPRKIVTEFKGVSLYNMLTKW
IMTEQELKDNSFPRPHPDGPKGRAKLYSSNARGQSNLSKVPNERFCCRCNKGYIVDRNGF
PIRKENCIYHYARKFTFRGESKYMCCKQDGSSDGCCDATTHVWDFVDVENLRGYVATFDK
HIIAEEQGIFALDCEMCYTTQGLELTRVTVINEDNHVVYETLVKPTHPIIDFNTRFSGIS
EKDMANVTTTLLDVQATLLSMFSSKTILVGHSLESDFKALKLLHNTVVDTSVMFPHKNGP
PYKRALKNLCSEYLRKIIQNDVGGHDSKEDATACMELILWKVKEEAKLQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgcttccttcgaccggttacttcaaagctatcaactgtccgttttacgagaacggatat
tgtgagagaccctactgtcacttcaggcattcacgtcgagatggagctagcacatctacg
gtggtcgcattggaatctactcagacagcttcgaaaacacaaaatgccgactcacccgcc
atagcgactgcaaattctgatgtgattcaacagcttgtctccgaggcggtcaagaaggtg
ttggccgatcaaaatgttaaggatacagataatatcataagtcaagttgtggagggatta
aagcctaaattggttccatccgtactttctgtagcacccaatcaagaatctaattcggaa
gatcccgcgttgagtacacacatgggcatacccgttataccatccacgtcgttaccatgt
gtttataatccaacgccaattgcggaattaaaaaagaggcatatacctattaccgcgtac
gaaccaacgagagagagtaaggcagtcaaaagaaagtctcccgacgttgaacgaccttgg
atggatgttattcgtaatattacttgtattaaggaatcaaaagttagttatacgccaact
gtcattaatcaagcactcgcggtagaaacaaattctgtgcataattatgttccaacaata
aagtcagaaacttcgttgaatttgtatgatgttaatagtagcagtaatgactcttacatt
cctgaaaagaaaaagaaaaaggaaatttactatccaaaacccaaaaaacgtcgagaagag
tatgtcccacggaaacctaaagttccattaaaaactaagcaacatttggaagaggattct
tacgatgtactcgatgaatttctgtgtggttctaaatccaatgccagtattccagttgac
gaagaatcccaagatttgttggatatcattccaaaattttcagacgatgataccacagct
agtgcagatataaccaaagaagaaaaaaaatcagacaatattgaaaataaaatctcacaa
gatgagaaggagaataaagaattaaagaaaagcgatgaaagtaataatagaagttataat
aagaattctaatcgattaaataaagaaaaatcgaataagcacgaagaatcgttgagacat
agtaaggaagatgtgtcaaaagttaagaatagatcatcggaaaaatcgagtaaggaagat
tcaaaacacagtaagcacaaaaataattcaaagcatagtaaaaataaggatgatgattcg
aaacacagtaagagtaaagaagagaatttaaagcatagtaaaaataatgaagaagattcg
aggcacggtaaaagcaaacaagatgatttaaagcacaataagaataaagagagagtggag
gaaaaaagagatagggaaaaggataaggataaaagtaaagataagctaaagcatggttca
aagagtagcgagcattctgtatcgtcttcaagggttagcagaagtaaagagaagagcaca
gttaaagataatagaaacagtaaggatagcttacatcacagtagaaaagattctaaatct
aataaaagaaaaagatctaactctaaggatttaaagaatagcaagaaagaatgtaaagaa
aaaagtaagcataagtctgatgagaaaagtaagcataagagtaaatcaagttcttcagat
tcaaaaagcaaatcgagtaaacaatcgcacaaaagttcaaacaagcattctagtcacaaa
tccaagagatctaataataaatctgcagcagaaagagaagacagtgtgagtgataaaaat
gatgagaaatcagatcgtgaaaataaatgttatagtcccgaatatgaagagttctcacca
ttttatgatgaacaacttcttgagacttctgattcggatcacgacgtcgaagaggagtgt
cgaaagatatttcaggaatatgaaatatccgatcatccaaaaagtgtatcgaacaaagct
ccttcgagacctgaaatcgaagaacctgaagagattttcaagaaaagggtcgcccatcca
tctgcaatctcaaatatgtctaagcacgttggaccgactcaacctccaaaacgcttgcca
aatccgcaacaacgaatgtacgaaagatggagaatgatgaaagaagtggcggctgaaaag
gccgcggaaaaggccgcggaaaaggcagcagcggaaaaggcggcggcagcagcagcagca
gcagcagcagcagcagagaaagcatcagctagaaaagcttttgaaacaaccgtacaaaga
aagccattggaaaataattctctagctcccaatgaccatcaaattaatggcaatggtcga
attagaatagctcaagttccgtatgccatgtctctggcattggagaagaaaaaagtctta
gaacaggcggctaaagtcgaaacaaagaccgttgctcaaaataaaaaaggaagtgcgcgc
gttgctcatattcctcaagtggtgccgcaattaatacgtcccgagccattacaaatttct
ggaacgcaaaaatttccactcaacgtgcgtcaattttacgttaacgcaatgcagaatatt
tgcgtgcaaatttacacgaattcggacgacgcggctcagcgagccgttcgggaggaattc
gcttgttacgagagatgtaaagccgttaatgtatataaaaattcttgtatgctgactgtg
cataggcttcgaaaggaagtcgatcaaaagtctaaagaatcgtcggcacctcatagcgga
acgatttcacacgaagccgtactagcaggtaaagtaaaaggttcgtggagcgttatcaag
ccaagaaaaatagtaactgaattcaaaggcgtgtcactatacaatatgttgactaaatgg
ataatgacggagcaagaactgaaggacaacagttttcctagaccacatccggatggtcca
aaaggtcgagcaaagttatattcctcaaatgctaggggccaatcgaatctttccaaagtg
cctaatgaacgtttttgttgccgttgtaacaaaggatatatcgtcgatagaaatggattt
cccattagaaaagagaattgtatttatcattatgcaagaaaattcacattcagaggggaa
agtaaatatatgtgttgcaagcaagacggctcatcggatggctgttgcgatgcaacgaca
cacgtttgggactttgttgatgttgaaaatcttagaggatatgttgcaacatttgataaa
catataattgcagaagaacaaggtatatttgctctcgattgtgaaatgtgctatacgaca
caaggtcttgaattgacacgtgtcacggtaataaatgaagataatcacgttgtttatgag
actttagttaagcctacacatccaattattgattttaatactagattttctggtatatct
gagaaagatatggcgaatgttacgacaacgttattagacgttcaagcaacgcttctttcc
atgttttcatcgaaaactatactcgtgggtcacagtcttgaaagtgattttaaagcatta
aagctcttacataatacggtggttgatacaagtgttatgtttcctcataaaaatggtcct
ccttataagagggcattgaaaaatttgtgctccgaatatcttcgcaaaattatacagaat
gatgttggtggacatgacagtaaagaagacgcaactgcttgcatggaacttattctttgg
aaagtcaaagaagaagcaaaacttcagtaa
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