Ceratosolen solmsi marchali (fig wasp): 105361563
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Entry
105361563 CDS
T06056
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03020
RNA polymerase
csol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105361563
09124 Replication and repair
03420 Nucleotide excision repair
105361563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105361563
03400 DNA repair and recombination proteins [BR:
csol03400
]
105361563
Enzymes [BR:
csol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105361563
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105361563
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105361563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Anti-RecBCD_p2
DUF5817
Motif
Other DBs
NCBI-GeneID:
105361563
NCBI-ProteinID:
XP_011497086
UniProt:
A0AAJ7DUQ5
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MYVLDEEQYKNENSEEISTKLWQEACWIIINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
ESPRIDLQMENQHKTGQIENITRHLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDVTKTVIKEGEVTETQHQKTFIGKIPIMLRSKYCLLSRLSDRDLTELNECPLDP
GGYFIVNGSEKVLIAQEKMATNTVYVFSMKDSKYVYKTEIRSCLENSSRPVSTLWINMMS
KSGTSFKKSTIGQRMIAILPYIRQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNIALNFIGSRGARPGVTKERRIKYAKEILQKETLPHVGISDFCETKK
AYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVKLYAQK
FINKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNSHYVILRLTF
ASTLSHLRRVNSPIGRNGKLARPRQLHNTLWGMLCPAETPEGASVGLVKNLALMAYISVG
SQPSPILEFLEEWSMENLEEITPNSVAYATKIFVNGCWVGIHRDPDQLMTILRKLRRQMD
IIVSEVSMVRDIRDREIRIYTDAGRISRPLLIVENQQLLLKKRHVDVLKERDYNNDGWQE
LVGNGVVEYIDTLEEETVMIAMSPEDLKQDKEFAYCTTYTHCEIHPAMILGVCASIIPFP
DHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPA
GINSIVAILCYSGYNQEDSIILNTSAVERGFFRSVFYRSYKDSEIKRLGDHEEQFEKPQK
QNCQGIRNAVYNKLDPDGIIAPGIRVSGDDVIIGKTMSLPEIDDELVSSVIRYTKRDVST
FLRNSETGIVDQVMLTLNNEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDM
PFTCEGMTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISSL
LMDYGYQLRGNEIMYNGYSGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQP
MEGRARDGGLRFGEMERDCQISHGAAQFLKERLFEVSDSYKIHVCNLCGLIAIANLRNNT
FECRGCKNKIQISQVKLPYAAKLLFQELMSMNIAPRLMVT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtcctcgatgaagaacaatataaaaatgagaattctgaagagatttcaacaaaa
ctgtggcaagaggcttgttggattattattaatgcctattttgatgagaaaggccttgtt
cgtcaacaacttgatagttttgatgagtttattgaaatgtcagttcagcgaatagtcgaa
gaatctcctagaattgatttgcaaatggaaaatcagcataagacgggtcaaattgagaat
ataacaagacacttagtaaaattcgaacagatttatttatcaaaacctacccattgggaa
aaggatggtgccccgtcaccaatgatgccaaatgaagctaggcttagaaatctgacttat
tctgctccactttatgtagatgttacaaaaacagttattaaagaaggggaagtaacagag
actcaacatcaaaaaacatttattggtaaaatcccaattatgttaagatctaaatattgt
ttgctctctagattatcagaccgagatttaacagaactcaacgaatgtccactagatcca
ggtggatatttcatcgttaatggatcagaaaaggttttaattgcccaggaaaaaatggca
actaatacagtatatgtattcagtatgaaagatagcaagtatgtatataaaactgaaatc
cgatcctgtttagaaaatagctctcgaccagtgtcaacattatggatcaatatgatgtca
aagagtggaacaagtttcaagaaatctacgattggtcagcgtatgatcgcaattttacct
tatattcgtcaagagattccaattatgatagtttttcgtgctttgggttttgttgctgac
cgtgacatccttgaacacataatatatgattttgatgatccagaaatgatggagatggtg
aaaccttcactagacgaagctttcgttatccaggaacaaaatattgcattaaattttatt
ggcagcaggggagcgcgacccggtgttactaaagaaagaagaattaagtatgctaaagaa
attctacagaaagaaacactaccgcatgttggcattagtgacttttgcgagacaaagaag
gcttattttctcggttatatggttcatagactgctatcggcctctttaggacgcagagaa
ttggatgatcgtgatcattacggcaacaaacgtcttgatttggctggtccattattagct
tttttattccgcggactatttaaaaacttaatgaaggaagtaaaattatatgcgcaaaaa
tttataaataaaggaaaggattttaatttagagcttgccatcaaaacaaaaattataact
gatggcttaagatactctttagcgacgggtaattggggagatcagaaaaaagctcatcaa
gccagagctggagtttctcaagttttgaatagtcattacgtgattctcagattaactttt
gcttcgacgctgtcgcatttacgccgtgtgaattcgccgatcggaaggaatggtaaatta
gctcgtccacgacagctgcacaacactttgtgggggatgttatgtccagctgaaacacca
gaaggtgcctcggttggtcttgtgaaaaatcttgctctcatggcctatattagtgtcggt
tcacaaccctctcccattcttgaattcttagaagaatggtcaatggaaaatttagaggaa
ataactccaaattcggtggcctatgcgacaaaaatttttgttaatggatgttgggtaggc
attcatcgagaccctgatcagttaatgacaatattaaggaaactgagaaggcaaatggat
atcatcgtttcagaagtatcaatggttagagatattagagatagagagattagaatttat
acagatgctggcaggattagcagaccattactgattgtagaaaatcagcaattattacta
aaaaagaggcatgtagatgtactcaaagaaagagattacaataatgatggatggcaagaa
cttgttggaaatggagttgttgaatacattgatactcttgaagaagaaactgtgatgata
gcaatgtcacctgaggatttaaaacaagacaaggagtttgcatactgtactacctatact
cactgcgaaattcatcctgcaatgattttaggagtttgtgcttctatcattccatttcct
gatcataatcaaagccccagaaatacttatcaaagtgcaatgggcaagcaagcaatggga
gtatatataacaaattttcacgtccgtatggacacccttgcacacgttctctactatcca
cataagcctcttgtaacaactcgttcgatggagtacctacgtttccgtgaactaccagct
ggtatcaacagtattgttgccatcctttgttattcgggttacaatcaagaagacagcatc
attctcaatacgagtgctgtggaacgtggctttttccgatcagtcttttatagatcatac
aaagattctgaaataaaacgccttggtgatcacgaggagcaatttgaaaaaccccagaaa
cagaactgtcaaggtataaggaatgctgtttacaataaacttgatcctgatgggataatc
gctcccggtattcgtgtctcaggagatgatgttattattggcaagacaatgtctttacct
gaaattgatgatgagttagttagcagtgtaatacgttatactaaacgtgatgtttcaacg
tttctacgaaatagtgaaacaggcattgttgatcaagtaatgttaaccttaaataatgaa
ggttataaattttgtaaaattcgtgtgcgcagtgttagaatccctcaaatcggagataaa
tttgcttctcgtcacggacaaaaaggtacttgtggtattcaatatcgacaggaagatatg
ccctttacatgtgagggtatgactcctgatatcattatcaatccgcatgccatcccttca
cgcatgacaattggtcatttgattgaatgcattcaaggtaaggtttctgcgaataaaggt
gagattggcgatgcaactccattcaatgatgcagtcaatgttcaaaaaatctcatcattg
cttatggactatggctatcaattacgtggcaatgaaattatgtacaatggctatagtgga
cgtaaaatcaatgctcaagtttttcttggccccacttattatcaaaggctcaaacacatg
gtagatgataaaattcatagtagagccagagggccggtacaaatcttagtaaggcaacca
atggaaggaagagcaagggatggaggtttacgttttggagaaatggagcgtgattgtcag
atcagtcatggagctgctcaatttttaaaagaacgactctttgaagtatctgattcttat
aaaatacatgtgtgtaatttatgtggtttaatagccattgcaaatcttagaaataatact
tttgaatgcagaggatgtaaaaataaaatacaaatatctcaagtaaagttgccttatgca
gcaaaattgttatttcaagaacttatgtccatgaacattgcaccacgtctcatggttact
tag
DBGET
integrated database retrieval system
