Ceratosolen solmsi marchali (fig wasp): 105361922
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Entry
105361922 CDS
T06056
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105361922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105361922
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105361922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
105361922
NCBI-ProteinID:
XP_011497533
UniProt:
A0AAJ7DV45
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MSVAPMGNLPYCKGLWSVISSTTCRCDRELVEDEIKNATEILRDGLAYFKPFTEKSLQLV
YKTDPPYRMFDLISKLSPLLNLDATISWDLVCNFMLYEYRNCAETFASQLTDLTSMQALI
EQIWSFYYTERITLIKCLKLMVEYRDNEKHPHRSHFTKFFDEILLGTLLESIRKQIEALK
FINPPIRSQLFSDEHLHQLYNFSLIEMRELLHIFTVILHDVHVAESQFLDIYGSISGEPR
RLISTKNHEDKETVAKKIQDIQYSQSALLIVGLDIMKHAGMEDWIRDVRSSMQDVFEHKC
TRDSSPQDGPLLLAWMLANYAIEPDNMDTFNRYRPFGIKAVQLNVFHYLQGLLSSEMIKE
KTQYAITVRGSIYNLLTSLCTFVDEDKFDSFPGVFEACAAILSFRETAERFWQERDEECG
LWVVIKFAINWFPYRFQPLTCILTGLASASDSSAIKTLEILENLPSITLEVPRRMFDVQM
QRKPYEQECVIHRNEYAIPVHCTGIKINAPHRSIANDECEVIMFRTTANYWDAFHHKIEV
LLQKASGGFANLTECNDQLPDQVTLGFTLLDALLAADIDIPTRMVIPTELSFEIINRFSY
PDLPLNIYKIVASCMKVSSKLVLRYPEDVLSRMRAGVYPRFDDYYQEMTEFARAVSFDGG
LVASWLSSIETIQHSYPILDAYLDTLLNYLIVRHSNKALYDVEIPGMIMLLQSVLPKLDS
WYFRSETERVELWLKSIYCLHRALDVMSGKKNESRNELRKIVSYNLLHLEPRHALLKLVR
TGEKILRNKMMSETDWISGKGFKVMKSVQLALSVVNRLLIYRKNLGLDTKERSPLEAALY
ASPSLPNALLIVPTIVDYLYVWFSPALQAMAVRLLKKFAEGFSMSLLVCMGMDGTAIRET
FASRLMSPTCDVEVKVAILELVTICLDKQPGLTEALFNIMHQAERRRIFPRPADEFLTEG
CTRFLDLYLERVRDERNIIYDRLYDSTMNLLRAMWYHHNEILVNFFRKRQDFWSKLFAPL
FRNLVPHVCGYSQILDIITLELFKSPLLEKDFITNLEKLLDESENHWNKLTSYVFNSIPA
PLTDEQQKQENEKEEEEEEEEEVIPEKETKLQPLLHEENLESWYQLLMVLTGERTSRGYT
IKPGQTVLTTSLAIQQLLVRLPVVFPTSMTARFHAAKLLMLLSLISLRCVNSWGKQCIGE
PENAERLQKWLLCALQEMRPLYRAYTKSLRETLLTLVLSWVDLVDEQLAEDQVVLEYMLG
HAWSIATCDIEDIYNAAYQMERNQKLDDIKEQQRREAEEAFRVRQCIPATLSISLVTRLL
RFKAQQVTEHYKRSLEPYLPLKRFIPTILKCIVKTIRMHXAALTLLNILVKSFSLSPTLF
ETSVSKLWLALIPPKDINNSLLNSLYEDCSSSSSRWRCQEWWPLYTSGLEFATNLMSHNN
ISCSTSINEYLGSHENLLMEGSTLLRHTADPVAADLIQSLVNFISALFAKHNFWKFIHHP
FKDTLIKCLYMSYDSTVNLLLRPRILKFIIDGISVESAEELQSCDERQLSGELRLLVNKL
ILINTSCAQNFVRFSPRLNRLFDTINIEKDFWDAPMAEMNFGPPQMSITSEPRLTYGTII
SSTQLFTQAQWHSLISSSSSGSSSLQLRPKPSQSPGSTTATTCKDEQSIDSARREWERAT
PENLRCVQAKDLPKILSSSSTNLGPSVLASTSSSARLDFSAYLTGHELTVPLLSSPRLIK
RPFDPLICENMILSRATALVPLPSRSTSRGNSPGAQSRTADGKSRSPSRDGTGNGTAGSD
PWFDSMDENNTRLALELNLMLTLCQVLEGVCSPRLAARDRQLIVRETATELGIFFDFLEH
RAQQSEWQVAASLVNSEMKKTRLVVAPEQLLDRLNTSSVFKQPDGPGRTLSALETLEEES
MEGPESVSTNEIVTSGRFKVHVDTSNFLQMLGKLLKSVIESLDSAQFG
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcaccgatgggaaatttaccctattgtaaagggttgtggtctgtgatatca
agcacaacgtgccgttgtgacagagaacttgtggaggatgaaataaaaaatgcgactgaa
atattaagagatggattagcatattttaagccatttacagaaaaatcattgcaattagtt
tataaaactgatccaccttacagaatgtttgatcttattagcaaattgtccccccttcta
aatttagatgcaacaatatcatgggatttagtatgcaattttatgctttatgaatataga
aattgtgctgaaacatttgcttcgcaattgacagatttaacttctatgcaagcattgata
gaacaaatatggagtttttattatacggagcgtattacactaatcaaatgtttaaaattg
atggtagaatatcgtgataacgaaaagcatccacatcgcagtcattttaccaaatttttt
gacgaaattctccttggcacgcttttagaatctataagaaaacaaatcgaggccttaaaa
tttatcaatccacctattagatcacagttatttagtgacgagcatcttcatcaattgtac
aattttagtcttatcgaaatgcgagagcttctacacattttcacagtcattttacacgat
gttcacgtggctgaaagtcagtttctcgatatttatggaagtatcagtggagagccacga
cgcttgatcagtacaaaaaatcacgaggataaggaaactgtggcaaagaaaattcaggat
attcagtacagccaatctgcgcttctcatcgttggactcgatataatgaagcacgctggc
atggaggactggataagagatgtcagaagtagtatgcaagatgtttttgaacataaatgc
acgcgcgattcatctccacaagatggaccattgcttttggcatggatgttggcaaattat
gccattgagcccgataacatggatacttttaatcgttacaggcctttcggtattaaagct
gttcaacttaatgtgtttcattatttacaagggcttctaagcagtgaaatgattaaagag
aaaactcagtatgctattaccgtaagaggaagcatctataatctattgacctcgttatgt
acctttgtagacgaagataaatttgactcttttccaggtgtattcgaagcgtgcgccgct
attctaagctttcgagagacagctgaacgcttctggcaggagagggacgaggaatgtggc
ctatgggtagtcatcaaattcgccatcaactggttcccctatcgattccagccactgact
tgcatcttaaccggtctagccagcgcctcggattccagcgccattaaaaccctcgagata
ttggagaacttgccgtccatcaccctggaggtgccgaggcgcatgttcgacgtgcagatg
cagcgcaagccctacgagcaggagtgcgttattcaccggaacgagtacgcgatacctgtc
cactgcaccggcatcaagattaacgcgccccacaggagcatcgcaaacgacgagtgcgaa
gtgataatgttcagaaccacggctaattactgggacgcctttcatcacaagatcgaggta
ttactgcaaaaggccagcggtggcttcgccaacttaaccgaatgcaatgatcaactgccg
gatcaagtcaccctgggatttaccctgcttgatgcacttttggccgcggacatcgacata
cccactagaatggtcattccaacagaattaagtttcgagataatcaatcgattttcttac
ccggacttaccgctcaacatatacaagatcgtcgcgagctgcatgaaagtctcctcgaag
cttgtcctccgctatcccgaggatgtgctctcgcgcatgcgagccggcgtctaccctcgc
ttcgacgactactaccaggagatgacggagttcgcgcgggccgtgtcgttcgacggaggc
ctcgtcgcctcctggctctcgagcatcgagaccattcaacactcttacccgatcctcgat
gcctacctcgacacccttttgaattatctgatagtgcgccacagcaataaggccctctac
gacgtcgagataccgggcatgataatgctcctccagagcgtgctcccgaagctcgactcc
tggtacttccgctccgaaactgagcgggtcgagctctggctgaagagcatctattgtttg
cacagggcgctggatgtcatgtcggggaagaagaacgagtcgaggaacgagctgagaaag
attgtcagctataacttgttgcacctcgagcccaggcacgctctgctcaagctcgtgagg
accggcgagaaaatcttgaggaacaaaatgatgagcgagaccgactggatatccgggaag
ggctttaaggtaatgaagagcgttcagctggccttgtcggtggtaaatcgtttgctcata
taccggaagaatttgggcttggatacgaaagaacgctcgccgcttgaagccgccctctac
gcctcgccttccttaccgaacgccctgcttatcgtcccgacgattgtcgattacctctac
gtgtggttcagcccggcactgcaagcgatggccgtgcgcctcctgaagaagttcgccgag
ggattctccatgtcgctgctcgtgtgcatgggcatggatgggacggctatacgcgaaacc
ttcgcctcgagacttatgtcgccgacttgcgacgtcgaagtcaaagtcgccatcctcgag
ctcgtcaccatctgtctggataagcagccaggactgacggaagcgctgttcaatataatg
catcaggctgaacgtcgccgtatcttcccacgaccagcggatgagttccttaccgaaggt
tgtacccgattccttgatctgtatttagagcgtgtacgcgacgaaaggaatataatctac
gatcgtctctatgacagcacgatgaatttattgcgtgctatgtggtaccatcacaacgag
attctcgtcaactttttccgcaagaggcaggacttttggagtaagcttttcgcgcctctt
ttccgcaaccttgtgccccacgtttgcggctactcgcagatcctggacattattaccctc
gagctgttcaaaagccctcttctagagaaagactttatcacaaatctggaaaagctctta
gacgagagtgagaaccactggaacaaattaacgagttacgttttcaacagcataccagca
ccgctaacagatgaacagcaaaaacaagagaatgagaaagaggaggaggaggaggaggag
gaggaggtaataccggaaaaagaaacgaagctgcagccgctattacacgaggagaacctc
gagtcctggtaccaattgctgatggtgctaaccggggagcggacctcgcgcggctacacg
atcaagcccggacagacggtgctgacgacgagcctcgctatccagcagctgctggtgcga
ttgccggtggtatttcctacctcgatgaccgcgcgattccatgccgccaagttgttgatg
ctcctgtcattgatatcgctgcgctgcgtgaactcctggggcaaacagtgcattggcgaa
ccagagaacgcggagcgactgcaaaagtggctgctatgcgcgctccaggagatgaggccg
ttgtaccgggcatacacgaagtcactgcgcgagactcttttgaccctcgttctaagctgg
gtagatctcgtggatgagcaattggccgaggaccaagtcgtcctcgaatatatgctcggg
catgcctggagcattgccacctgcgatatagaagacatatacaacgctgcgtatcaaatg
gagcgcaaccagaagttggacgatattaaggagcaacaacgaagggaagccgaggaggcc
ttccgggtgagacaatgcatacccgcaaccctatccatcagcctcgtcacgaggctactc
aggtttaaagctcagcaggttaccgagcactataagcgatccctggaaccctatttgccg
ctgaaacggttcatacctactatcctcaagtgcatcgttaaaaccattcggatgcatnnc
gctgccctcactctactcaacatcctcgtcaagtccttctctttgtctccaaccttgttt
gaaacgtccgtctcgaaattgtggctggccctgataccccccaaggacatcaataatagt
ttgctgaattcattgtatgaggactgttcgagtagcagcagccgctggcgatgtcaggag
tggtggcccctctacaccagtggcctcgaattcgccacgaacctcatgagtcacaacaac
atcagctgctccacgtctatcaacgagtacctcggctcacacgagaacctgctgatggag
ggctcgactctcctcagacacacggccgaccctgtcgctgcagatctcatccagtccctg
gtcaatttcatctcagctttattcgccaaacacaatttctggaaattcatccatcatcct
ttcaaagatacgttaattaaatgcttgtatatgtcgtacgacagtacggtgaatttactg
ttacggccgcgcatcctcaaatttatcatcgacgggataagcgtggaaagtgcggaggag
cttcagagctgcgacgagcgccagctgagtggcgagttgcgcctcctcgtcaacaaacta
atactcatcaacacgagctgcgcccagaacttcgttcgattctcgcctcgattgaatcgt
ctcttcgacactattaacatcgagaaagacttttgggacgccccgatggcagagatgaac
tttgggccaccgcagatgtcgataacgtctgagccacgtttgacctacgggacgatcatc
agttccactcagcttttcactcaggcccagtggcactcgctcatctcgtcgagcagttcc
ggtagctcgagcctccagctgaggccgaagcccagccagagtccgggttccacgactgca
acgacttgcaaagacgaacaaagcattgattcggcgcgccgcgagtgggagcgcgccacc
ccggaaaacctgcgctgtgtccaggccaaagacctgcccaagatcctgagctcgagttcc
acgaatcttgggccttccgtcctcgcgagcacttcctcctcggcgcgcctcgacttttcg
gcctacctcacgggccacgaactgacagtaccgctgctcagcagtccgcgactcataaag
cggcccttcgatcccctcatctgcgagaatatgatattgtcgcgggcgacggccctggtg
ccgctgccgtcgaggtccaccagccgaggcaacagccccggcgcccagtcaagaaccgcc
gacggcaagtcacgtagcccctcacgggacgggacgggaaacgggaccgccggcagcgac
ccctggttcgactccatggacgagaataacacgcggctcgctctcgagctcaacctaatg
ctcacactgtgccaggtcctggaaggcgtatgcagcccgaggctggccgcccgggaccgg
cagctcattgtccgggaaaccgccacggagctcggcatcttctttgatttcctcgagcac
agggcacaacagtcggagtggcaagtggccgcgagtctcgtcaactctgagatgaagaag
acaaggctcgtcgttgctcccgagcaactactcgataggcttaacacgtcgagcgtgttt
aaacagcccgacggcccgggccgcactctctcggcactggagacgctggaggaggagtcc
atggaagggccggaaagtgtttcgacgaacgagatcgtgaccagcggtagattcaaggta
cacgtcgacactagcaacttcctccagatgctcgggaagctgctcaagtccgtgatcgaa
tctttagactcggcgcagttcggataa
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integrated database retrieval system
