KEGG   Ceratosolen solmsi marchali (fig wasp): 105362049
Entry
105362049         CDS       T06056                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105362049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csol03041]
    105362049
Spliceosome [BR:csol03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105362049
 Complex C
   U5 SnRNP specific factors
    105362049
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 ANAPC4_WD40 eIF2A Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Nup120_160 MIOS_WD40 WD_LRWD1
Other DBs
NCBI-GeneID: 105362049
NCBI-ProteinID: XP_011497676
UniProt: A0AAJ6YGL4
LinkDB
Position
Unknown
AA seq 349 aa
MPILDKRKGDDILSLVPASKKTKNEVVFSSREKAVVQSGPPRTSSLTAPIMLLEGHQGDI
FSLEFHPEGQYLASTGFDRQIFIWNVYGECENISVMSGHSGAIMEMHFNPDGNHLYTAST
DMTLGLWDLIAGTRIKKLKGHTSFVNSVNGARRGITQLCSGSDDSTIRIWDPRKKGQCYT
LNNTYQVTAVTFNDTAEQVVSGGIDNDIKVWDLRKNAILYKMKGHTDTVTGLALSPDGSY
ILSNGMDNTLRIWDIRPFAPYERCVKILSGHQHNFEKNLLKCAWSLDGSKVSAGSSDRFH
YIWDTTSRRILYKLPGHNGSVNDVDFHPKEPIVCSGSSDKQIYLGEVDA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcctattttggataaaagaaaaggcgatgatattttatcgctcgttcctgcttcgaag
aaaaccaaaaacgaagttgtatttagtagtagagagaaagcagtcgttcagagtggacca
ccgagaacatcgtcgctgactgctcctataatgcttttggaagggcatcaaggagatatt
ttttctttagaatttcatccagaagggcagtatctagcttcaacaggatttgacagacaa
atttttatttggaatgtttatggagaatgtgaaaacatttctgttatgtctggtcatagc
ggtgcaataatggaaatgcactttaatcctgatggaaatcatttatatacagcaagtacc
gatatgacactaggtttatgggatttgatagctggaactagaataaaaaagctaaaaggc
cacacatcttttgttaattctgttaatggagcacgacgtggtataactcagctttgttct
ggtagcgatgatagtactattcgaatttgggatcctcgaaaaaaaggacaatgttatact
ttaaataatacttatcaggttactgcagtgacgtttaatgataccgctgaacaagtagtc
agtggtggtattgacaatgatattaaagtttgggacttgaggaaaaatgcaatattgtat
aaaatgaaaggccacactgatacagttactggattagctctaagtccagatggttcctat
attctttccaatggaatggataatacattaagaatttgggatatcaggccatttgcacct
tatgaaagatgcgtcaaaattctatctggtcatcaacataattttgaaaagaatttatta
aaatgtgcatggtctttggatggcagtaaagtatctgcaggatcttcagatagatttcat
tatatttgggatacaactagtagacgaattttgtataaacttcctggacacaatggatct
gttaatgatgttgattttcatccaaaagagccaattgtatgctctggttcgagtgataaa
caaatatatttgggagaagttgacgcttaa

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