Ceratosolen solmsi marchali (fig wasp): 105362630
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Entry
105362630 CDS
T06056
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105362630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105362630
03041 Spliceosome [BR:
csol03041
]
105362630
03036 Chromosome and associated proteins [BR:
csol03036
]
105362630
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105362630
Spliceosome [BR:
csol03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105362630
Complex B
105362630
Complex C
U2 SnRNP specific factors
105362630
Chromosome and associated proteins [BR:
csol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105362630
TFTC complex
105362630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_WDR36-Utp21_1st
EF_TS
Amj
Motif
Other DBs
NCBI-GeneID:
105362630
NCBI-ProteinID:
XP_011498414
UniProt:
A0AAJ6YHZ6
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGTKMQEILVSRGKSLELLRPDPNTGKVHTILTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYVSAKNVFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHVVGVDVGFENP
MFACLEIDYEEADTDPTGEAAIKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGDDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIIKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAAGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGIKDNDAGEDSNQMQ
STLHLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
FEYTPRKFVIHNESAHILLIETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEQVFGAPRAGPGLWASMIRVMAPTSGTTFQVHRLEQNLAALCLALVKFANQG
DQQFLIIGIAKEYQLNPRLSNGGFLYTYKVSSDCTNIELVHRTTLDEIPLSICSYQGRVL
VGVGKMLRLYDMGKKKLLRKCENKHIPNAVVCINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVAIADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRAEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPAKQKSIAGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatataatttgacgctgcagcgtgccacaggcattactcacgctgttcatggt
aatttttctggtaccaagatgcaagagattttggtttcaagaggtaaatctctggaactt
cttaggcctgatcctaatactggcaaagtacacacaatcttgacggtcgaagtctttggc
atcgttagatctttaatggcctttaggttaactggtggtaccaaagattatattgttgtt
ggatcagattcagggcgtattgttattttggagtatgtttctgcaaaaaatgtttttgaa
aaggtacatcaagaaacatttggtaaaagtggatgcagaagaattgttcccggacaatat
ttggctattgatcctaagggtcgtgctgtcatgatcggagctattgagaaacaaaaatta
gtctacattcttaatagagatcctgaagctcgtcttacaatttcatctcctttagaagca
cataagagtaatacacttgtttaccatgtagttggtgtagatgtaggttttgaaaatcct
atgtttgcgtgcttggaaattgattacgaagaagctgatactgatccaacaggagaagca
gctataaaaacacaacagacattaacattttatgaacttgatcttggtcttaatcatgtt
gtgcgcaagtacagtgaacccttggaagaacacgcaaatttcttggtttctgtacctggt
ggaaatgatggcccaagtggtgtactcatttgctcagaaaattacttaacatacaagaat
ttgggtgatcaaccagacattcgttgtccaattccacgacgtaggaatgatcttgatgat
cctgagcgtggcatgatatttgtttgttctgcaactcataaaacaaaaagcatgtttttt
ttcttggcacaaaccgaacagggtgatattttcaaaattaccttagaaacagatgaagat
gttgtgacagagattaagctcaagtactttgatacagtgcctgtagctaccagcatgtgt
gtacttaagactggttttctgtttgttgcttcagaattcggaaatcattacttatatcaa
attgctcatttgggtgacgatgatgatgaaccagaattcagttctgcaatgcctttggag
gagggtgacacgttcttttttgcacctagacctttaagaaatttagtgcttgtggatgaa
atggacagtctctcacctattatggcttgccaggttgctgatttagccaatgaagatacg
ccacaattatatatagcatgtggtcgtggtccacggtcaaccttacgagtattacgacat
ggtctcgaagtttcagagatggctgtgagtgaattacctggtaatccaaatgctgtgtgg
actgtcaaaagacgcatcgacgaggaattcgatgcatacatcatagtgtctttcgtgaat
gccactttggtacttagtattggagagacggtcgaggaagttacagattccggttttttg
gggacgacgccaacccttagctgttccgcattaggtgatgatgctttagttcaggtgtac
cctgatggtattcgtcacattcgagcagataaacgtgtcaatgaatggaaggctcctggg
aagaaaactattatcaaatgtgcagtgaatcaacgtcaagttgtcattgctttgactgga
ggagaacttgtctactttgaaatggatccgaccggtcaactaaacgaatatacagagcgc
aaaaagatgccgtcggaggtaatgtgcatggctctggggaatgtcgccgctggtgagcag
cgctcatggttcttagcagttggacttcaggacaacactgtgcgcattatttctcttgat
ccatcggactgccttgcacctagaagtatgcaggctttgccagccgctgctgagagcctt
tgtattgttgagatgggtattaaggacaatgatgctggcgaagatagtaatcagatgcaa
tcaacactccacttaaatataggcttgcaaaacggagtcctacttaggacagttttggac
ccaatatcaggtgatttagctgatacgcgaacacgttatctcggttctcgaccagtaaag
ttgttccgcattagaatgcaaggtaatcaggctgttcttgctatgagtagtcgctcttgg
ttaagttattattatcaaaatcgattccatctgacgcccttatcttacgagagcttggag
ttcgcctctgggttcagttcagaacaatgtccagaaggtatcgtcgccatttctaccaat
accttaagaattttagcacttgagaaactcggcgctgtttttaatcaggttagttttcct
ttcgagtatacgccacgtaaattcgttattcataacgagtcggcgcacatcttgctcatc
gagacggagcataatgcttacacggaggagaccaaacaacagcgacgattgcaaatggct
gaagagatgcaagaagcggctggtgctgaagaggctgcggttgctcgcgaattggccgaa
gcctttctctcagaagagccgaacgagcaggtttttggtgctcctagggctggacctggt
ctttgggcttctatgatcagggttatggcacctacatccggtactacattccaagtccat
agactcgaacagaatttggctgcactctgtttggctcttgtgaaatttgcaaatcaggga
gatcaacaattccttattattggtattgcaaaagaatatcaattaaatccaagactcagc
aatggtggatttctttatacttataaagttagttcagattgtacaaacatcgaattggtt
catcgtacgacactcgacgagatcccgttatcgatctgttcgtatcagggtcgcgttttg
gtgggtgttggaaagatgctacgactatatgatatgggtaagaagaagctgctccgcaag
tgcgagaacaaacatataccaaacgccgttgtatgcataaatgcgattggtcaaagaata
tatgtaagtgatgtccaggaatcggtgtacgcagttagatacaaaaggcaagagaatcag
ttaattgtgtttgccgatgacactcatccgagatggatcacaactacttgtgtgttggat
tatgataccgttgcaatagcagataaattcggcaacattgctgtgatccgattagcgagt
gggattaatgacgatgtggacgaagatccaacaggcaataaggccctatgggatcgtggc
ctcttgaatggagcctctcaaaaggcggacactgtggcctgcttccacgtgggcgagaca
gtgatgtctctacagaaggcgaccctgattccaggtggttccgaatctctagtctacaca
acgctaagtggtaccgtgggtgtcctcgtgccctttactagtcacgaggaccatgacttt
tttcagcacttggagatgcatatgcgcgctgaacatccgcctctatgcggacgtgatcat
cttagtttccgttcgtattattatcctgtcaaaaatgtaattgatggtgatctttgtgaa
cagttcaacagtattgagcctgcaaaacaaaaaagcatcgcaggtgatcttgagagaact
ccatccgaggtctccaaaaaacttgaagacattcggacgagatatgcattttaa
DBGET
integrated database retrieval system