Ceratosolen solmsi marchali (fig wasp): 105362758
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Entry
105362758 CDS
T06056
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105362758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csol03400
]
105362758
DNA repair and recombination proteins [BR:
csol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105362758
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
105362758
NCBI-ProteinID:
XP_011498548
UniProt:
A0AAJ6YI91
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MSKTNTLLNYFSSPKAGSPRVNGDSSPKVGSPRVNGDSPASRPRSLSRSKSKTPKGKRKN
RDSNDNKLNGKANDKADNKANGKTNGKANGKAYGKMADERSKERKRSLEDLDDEDDEDDD
EDDNENDENDVSIDEKEMVTPKPNKRRRIIVPEDNTDDSENDYEPENSEESDASEESFSE
EVEEDESPKKKPKMSVNKKSAVKIIGKKSASKNDSILNNQEQPTAKASDTQSWPHLKYDF
LQPDKIKDNKKRPPSHPDYDPKTVYVPPDFLSTQTPAMNQWWLLKTNHFDCVLFFKVGKF
YELYHMDAVTGVKELSLSFMRGEFAHSGFPEIAYGRFSASLIERGYKVARIEQTENPEMM
SQRCAKMSRPSKFDKVVKREICQISSKGTRAYTAQDAEPSVAASSYLLAIVEKRIPNETR
SAYGVCFIDTTIGEFNLGQFQDDSYNSRLLTLLAHYPPAHIIYERGNLTRMTLTILNNLL
PSAMKDALQKNSEFWTSTKVLQTLHEDGYFKNDNDSNFSWPKGLQSYLNRGDSLGLTASE
EKELAVTALGGCVYLLKEYKLDHQLLSQGRFKSYVPPDFSIDSQSNETNFAYNMVLDAMT
INNLRVLGNDGSLIKTLDNCCTAFGKRLLQEWICRPSCRKAVIIERQEAVTQLLDNPDVV
QEVRSKLSRLPDLERLLSKIHSQGNTAKSPNHPDRRAILFEGQTYSKRTIVQFITALNGF
EEVINIIKCFDDFTNPLINKCTKLEPEGNFTELKETLDNFKMSFDHEEAKKEGFIVPKEG
VDSDYDAVLLELADIKKELQDYLVKQKRHFGVSIQFCGSGRKKYQIEVPESQIKKVGSGY
ELQGSRKGFKKYYTNEAKDLLAREIAAEEQKDKVLKNSNGKIFSKFSELYDKWSKATYNI
AVLDCLISFSEYARSCDTCVPIILDDVNNEKIFIEIIDGKHPCIVSDNFIPNDTSIASGE
AAPLMILTGPNMGGKSTVMRQVGLITIMAQIGCHVPASACRLTLVDRIFTRIGANDDIMA
GQSTFLVELSETAAILQHATKYSLVLLDELGRGTSTYDGTAIAASVVEALTKTKCRTIFS
THYHSLVEDYKTNNNVSLAHMACMVENEDEDKISEENVTFLYKLSEGACPKSYGFNAARL
AGVPVNIVKRAHDIATKLETEVNLRHAFVSLCTLKDNSSIIPLLRKTLF
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagacgaatacgctgttgaattatttctcgtcgccgaaggccggttcgccgagg
gtgaacggcgattcgtcgccgaaggtcggttcgccgagggtgaacggcgactcgccggcc
tcgaggcccaggtcgctttcccgttcgaaatccaagaccccgaagggaaaacgaaagaac
agagattcaaatgacaataaattgaatggtaaggcgaatgataaagcagataataaggcg
aatggtaagacaaacggtaaggcaaatggaaaagcatacggtaaaatggcagatgaaaga
agtaaggagcgaaaaagatcgttggaggatcttgacgacgaggacgacgaggacgacgat
gaggatgataacgagaatgatgaaaacgatgtgagtatcgatgagaaggaaatggttaca
ccaaaacctaataaaagaagaaggataattgttccagaagataataccgatgattctgaa
aatgattacgaaccagaaaattcagaagaatcggatgcatccgaagaatcattttccgag
gaagtagaagaagacgaatctccaaagaaaaaaccaaaaatgtccgtaaataagaaatcc
gcagtaaaaataattggaaaaaaatcagcatctaaaaatgattcgatattaaacaatcaa
gagcagccaactgcaaaagcatcggatacacaatcatggccacatttgaaatacgatttc
ttacagccggataaaattaaagacaataagaaacgtccgcctagtcatccagattatgat
ccgaaaacggtttatgttccaccggacttcttgagtacacagacaccggccatgaatcag
tggtggttattgaaaacaaatcatttcgactgtgtattatttttcaaagttggtaaattt
tatgagttgtatcatatggatgctgttactggagttaaagaacttagcttgtcttttatg
aggggagagtttgcacattcgggttttccggaaattgcttatggacgtttttccgccagt
ctaatcgaaagaggctacaaggtggcaagaatcgaacagacggaaaatccagaaatgatg
agtcaacgatgcgctaaaatgtcaagaccatcaaagttcgataaagttgttaaacgtgaa
atttgccaaattagcagcaaaggaacaagagcctataccgctcaagatgccgagccatcg
gtcgcagcatcttcgtatttattggctattgttgaaaagcgcatacctaacgaaactcga
tcagcctacggtgtctgctttatcgatacaaccatcggtgaatttaatcttggacaattt
caagacgatagttataattctagactgttaactttactagcgcattatccaccagctcat
attatttatgagcgcggcaatttaaccagaatgactttgacaatactcaataatttattg
cccagtgctatgaaagacgccttacagaagaatagcgaattttggacgtctacaaaagtt
ttgcagaccttgcacgaggatgggtatttcaagaatgacaatgattctaatttttcgtgg
cctaaaggcttacaatcatacttaaatagaggtgatagtttagggctcactgcttcggaa
gaaaaagaactagcagtcacagccttaggtggctgcgtatatttactcaaagagtacaag
ttggatcatcaattattatcgcagggccgatttaaaagttatgttcctccagatttctct
atcgattctcaatccaacgaaacgaatttcgcttataatatggtcttggatgctatgacc
ataaataatttgcgagttcttggtaacgatgggtccttaattaaaacattagataattgt
tgcaccgcatttggtaaacgtctattacaagaatggatatgtagaccttcttgtcgtaaa
gcagttattatcgagcgccaagaagctgtgacgcaattattggataatccagatgttgtc
caagaagttcgaagcaaattaagtcgcttaccagatctcgaacgtttgctaagcaaaatt
cactcgcaaggaaatacagcaaaatcaccaaatcacccggacagacgtgctatattattc
gagggtcaaacttattcgaaaaggacgatcgttcaatttataactgcgctcaatggcttc
gaagaagtcataaatataatcaaatgcttcgatgattttactaatccattgattaataag
tgcacaaaattggaaccagaaggcaatttcaccgaattgaaggaaaccttagataatttt
aaaatgtcatttgatcacgaagaagctaaaaaggagggtttcattgtccctaaagaaggc
gttgatagtgattacgatgctgttttgctcgaacttgccgacattaagaaagaattacaa
gattatctagttaagcagaaaagacatttcggtgtgtcaatacaattctgtggaagcggc
cgtaaaaagtatcaaatcgaagttccagagagtcaaattaaaaaagttggaagtggttac
gaattgcaaggatcgagaaaaggattcaaaaaatattatacaaatgaagcaaaggatctt
cttgcaagggaaatcgccgccgaggaacaaaaggacaaggttttgaaaaacagtaatgga
aagatctttagcaaattcagcgagctgtatgacaaatggagtaaggctacttacaatata
gcagttttagattgtttaatatccttctccgaatatgctcgtagttgcgatacttgcgtt
ccaataattctcgacgatgttaataatgaaaagatttttattgagataatagatggcaaa
catccatgcatcgtttccgataatttcatccccaatgacacgtcaatagcgagtggtgaa
gcagctccattaatgattttgactggaccgaatatgggaggtaaatcaacggtgatgcgt
caagttggacttattacaataatggcacaaattggatgtcatgtgccagccagtgcttgc
agattaaccttagtcgatcgtatctttacgcgaattggagcaaatgatgatattatggct
ggtcaaagtacattcttagtggaattaagtgaaactgcggccatacttcagcatgcaaca
aagtattctctagtccttctcgacgaattaggccgtggcacgtcgacttatgatggaact
gccattgctgcgtcagtagtagaagctcttacaaaaactaaatgcagaacgatattttcc
actcattatcattcccttgtcgaggattataaaacgaacaataatgtttctctcgctcac
atggcctgcatggtggagaatgaagatgaagataaaataagcgaggagaatgttactttc
ttatacaaattgagcgagggtgcatgtccgaagtcttatggttttaatgctgccaggttg
gctggagtaccggttaacatagttaaacgagctcacgacattgcaacaaaattagaaact
gaagtgaatcttcgacatgcatttgtttcattgtgcaccttaaaagataattcctccatt
atacctttattgcgaaagactctgttttga
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