Ceratosolen solmsi marchali (fig wasp): 105362862
Help
Entry
105362862 CDS
T06056
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105362862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105362862
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105362862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105362862
NCBI-ProteinID:
XP_011498687
UniProt:
A0AAJ6YII0
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MADENEDQWLYGDSGDGKDSFPENSDSQPAENEVDYNNQDEPYHQQNDDTRGENESEAPE
MEELIHDARDAACGDNFDGDNEHQEHNQDEDSLSNEAKENGTNDGQNQDDEDGASDSESD
DDVHVVIGDIKSTPAQYSSLNIKRGGLLTSSGAGPDKLKQQSGKFSIDEFETIGVINGIP
AHEYNLDQLEDKPWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGTGA
PGNVANPGSRVPQVTITNYNSKYSGIVGPKRAGPPPGRKMAGTIDVIGSTGLASRRNLDK
SPPKENVIQVMTADRREYSRKPPGGFPDMSVPPPGPTIPPSFDMPPPGYQEPVVPYFIPE
PDPYYHSYEPTQDRQWGNDPTWQPSNITIPLTGEDMKEQGPKSMPMMVPPSMSSMGPRDA
RDRDRERDRERGRERDREYEEAMARERDRDRDRDRDREREKDSRRGGEEREIESSTREDD
RERDRSRLQYRHKERSRSRRHKSRSRSPSRRKKKSRRSERERSKEESE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagaacgaggatcaatggttgtacggcgactcgggagatgggaaagacagc
ttccctgagaattcggatagtcagccagctgagaacgaggtggactacaataatcaggat
gagccttatcatcagcagaacgacgatacccgtggggagaatgagagcgaggcgcccgaa
atggaggagttgatccatgatgctcgagatgcagcttgtggggataattttgatggtgat
aacgagcaccaggagcataatcaggatgaggactcgttgtccaatgaggcgaaggagaac
gggacgaacgacggccagaaccaggacgacgaggatggggcctcggactccgagtcggac
gacgacgttcacgtagttatcggggacataaagtcaactcctgcgcagtacagcagttta
aatataaagcgaggcggcttgttgacgtcatcgggtgcaggcccggataagctgaagcag
cagtccggaaagtttagtatagacgagtttgagactatcggtgtgataaacggcatacct
gcgcacgaatacaatttagaccaattagaggataagccgtggaggcagcctggagctgac
ataaccgactactttaactacggatttaacgaagagacttggagagcttactgtgagcga
cagaagcgaatgagaagtgaatctggtgtaggattaatattaaatgccggcactggcgca
cctggaaatgtggcgaatccaggatcgagagtaccacaagtgacgattaccaattataat
agcaaatattcaggtattgttgggccaaaaagagcaggacctccgccaggtcgtaaaatg
gcaggaactatagacgttatcggtagtacaggtttagcttctagaagaaacttggacaaa
tcgccgccaaaggaaaatgtaatccaagtgatgactgcagacaggcgggaatattcgcgg
aaaccgcccggtggctttccggacatgagtgtccctccgccaggtcctacaataccacct
tcgttcgatatgccaccgcctggttatcaagagccagttgtaccctatttcataccagag
cccgatccgtattatcacagctacgagccaacccaagacaggcagtggggtaacgatcct
acctggcagccgtcaaatataactatccccttaacaggcgaggacatgaaagagcagggg
cccaaatcgatgccgatgatggtcccaccgtcgatgtcgtcgatgggcccgagagacgcg
agggacagggaccgggagcgagatcgggagaggggccgggaacgtgaccgagagtacgag
gaggcgatggcgcgggagcgggatagggatagggacagagaccgcgatcgggagagggaa
aaggactcgaggagaggaggggaggagagggagatcgagtcgtcgacgagggaggacgac
cgcgagcgcgacaggtcacggctgcagtacaggcacaaagaaaggtcgcgttcacgccgt
cacaaatcacgatccaggagtcccagtcgccgcaaaaagaaatcacggcgctcggagcga
gagcgctccaaagaggagagcgagtaa
DBGET
integrated database retrieval system
