KEGG   Ceratosolen solmsi marchali (fig wasp): 105363073
Entry
105363073         CDS       T06056                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105363073
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csol03019]
    105363073
Messenger RNA biogenesis [BR:csol03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105363073
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     105363073
SSDB
Motif
Pfam: PAT1 Pyrid_ox_like
Other DBs
NCBI-GeneID: 105363073
NCBI-ProteinID: XP_011498953
UniProt: A0AAJ6YJ11
LinkDB
Position
Unknown
AA seq 771 aa
MQLLQMADSFFEFDTGFGVGSEDGSECLDDDDYGEENNYDALNDETFGSEATAGDWEQDH
EKLAQITEQSRPRNRNECSKSESEIDVENSLSHLVLDEKEVTIPRPGVWDSPTNFSIPPP
QIRLKPSLSTTLKNACTVEELERGLITNRPPPGLIKQSVSQTYLPTNMTGANIFVNSIAS
LDRLQQFNAVITALKQFPHVLPSNVRVAHPQFHLQNVRPLPNQPGNILRYPLPPPHLLMP
PGSQRQPPLHGNFPLNSFHHSPNSGIGPQTYLRPDHPLMPPYANNHQNMQQHNMHIGNQR
NQNKQLNHNDRQENHHQPFFRNNQYHHHNQNHINRYHPNHVHHGYPMHHYIMNHHQNHMG
SNGIGPSGEHDEYAGLMNNREKQWLNNIQLLQLNTNQPYIDDYYYTVFCDRLNKKNETKN
RNKINSQKSNNNIAGNNNNGYHRDSRDRDQPHHSFTKVASTPMQFENSLGKLQYSSVTAP
RKIIDMDVVPNSDPHQSQSVQQKDTKKTRQLLLEIERLYILLLKLEDKNNPLAIIADQQR
EQQQQESGETISESEPKDPVKEKEELILSIMSPFLQLIQEDKFASFLSIRKGKTLFLRFL
PCINVKENEFKLSKLWAAVIKGLTIIGRRDSHLLINFYTEFHKWVDENSISFLLLTNLAK
EFIESANQPSKNNSLTFALTNKFGISVISLMLKHAENLQCAYDVIYEPFTQQWPKFLRAI
IESLGTSSPVFSPCHVLDAEGLTSHLRRNGIESESQVAAFELFFTEANTAS
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgcaattattacaaatggcagactctttcttcgaatttgatacaggcttcggcgttggc
tctgaagatggatccgaatgtctagacgacgacgattacggagaagaaaataattacgat
gcattgaacgatgaaacttttggatcggaagcaactgcgggtgattgggaacaagatcat
gaaaagctagcccaaatcactgaacaaagcagaccacgaaaccgtaatgaatgcagcaaa
agtgaatcggaaattgatgttgagaatagtctttcacatttggtactcgacgagaaagaa
gttactatacctcgacccggtgtttgggatagtccaacaaatttttctatacctccacct
caaattcgactaaaaccttcattatcaacaacgcttaaaaatgcatgtacagtggaagaa
ttggaaaggggacttatcactaatcgaccgccacctggtctcattaaacaatccgtgtcg
cagacttatctacctacgaacatgactggtgctaacatatttgttaactcgatagcatcg
ctagatagactgcaacaatttaatgctgtgattacagctctgaaacaatttccccatgtt
cttccctcaaatgttagagtagcacatccacaatttcatcttcaaaatgttcgaccattg
cctaatcaacctggaaatattcttagatatccattaccacctccacatttactaatgcca
cctggaagtcaaagacaaccaccacttcacggcaattttccacttaacagttttcaccat
tcacctaattctggtataggaccacagacatacttgagaccagatcatccattgatgcca
ccttacgcaaacaatcatcagaatatgcaacaacacaatatgcacatcggaaatcagaga
aatcaaaataaacaattaaatcataatgatcgtcaggaaaatcaccaccaaccctttttc
agaaataatcaatatcatcatcataatcagaatcacataaataggtaccatcccaatcat
gttcaccatggatatccaatgcaccattatattatgaaccatcatcaaaatcacatggga
agtaatggcataggaccatccggtgaacacgatgaatacgcaggattgatgaataacagg
gaaaaacagtggctgaataatatacaattactacagttaaatacaaatcagccgtatatt
gacgattattactatacggttttttgtgatcgattaaataagaaaaacgaaacaaaaaat
cgcaataaaattaacagccaaaagtctaacaacaatattgcaggaaataataataatgga
tatcacagggattcaagggacagagatcaacctcatcattcctttactaaagttgctagt
actccgatgcagtttgaaaactctttgggaaaattgcagtacagtagtgttacagctcca
agaaaaattattgacatggatgtcgttcctaatagtgatcctcatcaaagtcaatctgtt
caacaaaaggatacaaagaaaactcggcaacttcttttagaaatcgaaaggctttatata
ttgctattaaaacttgaggacaagaataatcctttagctataatagctgatcagcaacgc
gaacaacagcaacaggagagtggcgaaacaatctctgaatctgaacctaaggaccctgtg
aaagaaaaagaagaacttattttatctataatgtcaccatttttgcaacttattcaagaa
gataaatttgccagctttcttagtattcgcaaaggcaaaacattatttcttcgattttta
ccgtgcattaacgttaaggagaatgaattcaaactgtccaaattatgggctgcagttatc
aaaggtttaacaatcattggacgaagggattctcatttgttgattaatttttataccgaa
tttcacaaatgggtggatgaaaattctataagcttcctgttgttgaccaatttagctaaa
gaattcatcgagtctgcaaatcagccatcaaaaaataatagccttacatttgcgcttaca
aataagtttggcatatcagtgatatcactgatgctgaaacatgccgaaaatttacaatgc
gcatacgacgttatatacgagcccttcactcagcaatggccgaaattcctgcgtgctatt
atcgagtctctaggaacgagttcgcctgttttctcaccctgtcacgttcttgatgccgaa
ggcttgacgagccacctacgacgtaatggcattgagtcagaatcacaggttgcggcattt
gagctctttttcacggaggccaataccgcttcataa

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