Ceratosolen solmsi marchali (fig wasp): 105363394
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Entry
105363394 CDS
T06056
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csol03000
]
105363394
Transcription factors [BR:
csol03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105363394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
105363394
NCBI-ProteinID:
XP_011499369
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSAIGRLRMSSKRKSPPTKLSEGGGGQQGTVAGNEEEEDTSSSLAGPGGELPTSASNCNI
IADEPDIDEEQQQQQEQQLGSYHLPGESSGCSSPATSEPEICSSPSPYGPTDAKRPKLQL
LLGAVAAVAATVGPENNNITTGYHHPHHHHHHPHHHHHRTNSSPASSQLHEPASSSECGS
PPALPSDHPYYPHHQHHPHHHNNNNNTATQNNNNNNNNGTGPTTAAGKRSMDDVLKRLTC
KKSRVSLSLEDANSRRTPPPSTTPTSHNTHSSSSSLANSVAPSPTGTSRTQNADTGQQES
DGAAVALHRALCAESFAEKERRLSEMILQLQMLREQLLQQQQDPSKPYPTHIGVDSQKQI
DMQRLQSEHLKRLQEHIMQHNIQELQAQLTKGQLGMAGPQSLMFLPFLEQLRGLPIPTPM
PPPTSTTTTGSKHINSIANMISSHREGPSWATAHLAQMSTQLDKERSPTPISTAATPAAP
PPPMPPDPDAPLNLTKPKSSGAIANSSPSSDSAVLAGSGQHQEQPLAATAPKLFPPGMAM
PRNYLPSLPYAGLPPHLSSLSTPTCETIVSKMAKEENSSSVRDGSGGGTQTGSVAAAAVA
AVEKHFVMHGIYGLPPPNTGAMPPSPQQQRQMKHSSARDESAPDEQDFLSSPHMWRDSGY
KVSEDIAEKAKMVRQQKREGENKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKIL
GARWKAMSNSEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKSLMR
QRRQEMRQLWCRDGGPEIGFLSPVQSDMSGQQQQHASGAGPSARPSVSPPTSMLNGTAGP
SSDHPSFYYPQDSLSPTDVLNFSPDNSGSMGGYDAGSPRHHADED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatcggcaggctaaggatgtcctcgaagaggaagtcgccaccaacaaagtta
tcggagggtgggggcggtcaacagggaacagtggcgggcaacgaggaggaagaagacacg
agttcgtccttggctggtcctggcggtgagctacctaccagtgctagtaactgcaacatt
atcgcagatgagcccgacatagatgaggaacagcaacaacaacaagagcaacagcttggt
tcctatcatttacccggcgagtcatctggatgttcgtcaccagccacgagtgagccggaa
atttgttcgtcgccttccccatacgggcctacggacgccaagcgacccaaactccaacta
cttttaggcgccgtggccgcggtcgctgctacagtcggacccgagaataataatattacg
actggataccaccaccctcatcaccatcaccaccacccacatcatcatcatcaccggacg
aactcttcaccagcctcgagtcaacttcatgaacccgctagttcatccgagtgcggttcg
ccgcccgctctgccatccgatcacccttactatccacaccatcaacatcatcctcatcac
cataacaataacaacaacactgccactcaaaataataataataataacaacaacggcact
ggaccgaccaccgctgccggtaagagatccatggacgacgttctcaaaaggcttacctgc
aaaaagagtagagtgtctctgtcgctcgaagacgcaaatagtaggcggacaccaccacct
tccaccacaccaaccagccacaatacgcacagtagcagcagtagcttagcgaacagcgta
gcgccctcgccaactggcacgagccgaacacagaacgcggacacgggccaacaggagtcc
gacggagccgcggtggccctccacagggcattgtgtgccgagagctttgctgaaaaggaa
cgcagactgtccgagatgatccttcagctgcaaatgcttagggagcagttgctgcaacag
caacaggacccttccaagccgtatcccacacatataggtgttgactcacaaaaacagatt
gatatgcaacgattgcaatcggagcacctaaagcgtttacaagagcacataatgcagcat
aatattcaggagctacaagcacaactcacgaagggccagttgggaatggctggacctcag
tctcttatgttcttaccgtttctcgaacagttaaggggtttgccaattccgacgcccatg
ccaccgcccacttctactactaccaccggcagcaagcacatcaattctatcgcaaacatg
ataagtagtcatcgagagggtccgagctgggcgacggctcatcttgctcagatgtcgaca
caactggataaagaacgatctccgacgcccatatcgacagcggcaacgccagcagcgcca
cccccgccaatgccccctgatccggatgcacccctcaatctgaccaaacctaaatcctca
ggtgcaattgcaaattcatctccaagtagcgattccgcggtgcttgcaggcagtggtcaa
catcaggagcagccactagcagcgacagcaccaaagctctttcctcctgggatggcaatg
cctaggaattatctaccaagtctaccctatgctggattgccaccgcacctcagctctctc
tctacacccacctgtgaaactatagtgagcaagatggcaaaggaagagaacagcagctct
gttagggacggcagcgggggaggtacgcaaactggttcagtagctgctgcagctgtggcc
gctgtcgagaaacactttgtgatgcacggaatctacggtttgccaccaccaaatactgga
gcgatgccgccttcgccccaacaacagaggcaaatgaaacactcatcagcacgggacgag
tccgcaccagacgagcaggacttcctctcgtcgccacacatgtggcgtgattcaggctat
aaagtttcagaagacattgcagaaaaagcaaaaatggtgaggcagcaaaagagagaaggt
gaaaacaaaccacatataaaacgaccgatgaatgctttcatggtgtgggctaaagatgaa
cgtagaaaaattttaaaagcttgtccagatatgcataactcaaacatatctaaaattctc
ggtgcccgatggaaagcgatgtcgaattcagagaagcagccttactacgaggaacaatcg
cggctctctaagttacatatggagaaacatccggactacaggtaccgtccgcgccccaaa
cgaacctgtatcgttgacggcaagaaaatgcgtatttccgagtataaatcgctgatgcgt
caacggcgacaggagatgcggcaactctggtgccgagatggtggtccggagatcggcttc
ctttcacccgttcaatccgacatgagtggtcaacagcagcagcacgcgagcggtgcaggg
ccttcggctcgaccctctgtgtcgccgccaacgtcgatgctcaatggtactgctggtccc
agctccgatcatccctcattctactacccacaggatagtctttcgcctaccgacgttctc
aacttttcaccagacaactcgggctccatgggcggctatgacgccggtagtcctcgtcat
cacgctgacgaagattga
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