Ceratosolen solmsi marchali (fig wasp): 105363413
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Entry
105363413 CDS
T06056
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
csol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105363413
09122 Translation
03013 Nucleocytoplasmic transport
105363413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105363413
03041 Spliceosome [BR:
csol03041
]
105363413
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105363413
Spliceosome [BR:
csol03041
]
Complex C
Other components
EJC/TREX
105363413
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105363413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Beta-prop_EML
eIF2A
RMC1_N
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
DSE1_N
WD40_RFWD3
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
PAC11
Beta-prop_TEP1_C
Beta-prop_EIPR1
TRM82_WD
Beta-prop_WDR75_1st
Peptidase_S9_N
Cytochrom_D1
PD40
Beta-prop_Nup120_160
Beta-prop_NWD2_C
PROPPIN
Motif
Other DBs
NCBI-GeneID:
105363413
NCBI-ProteinID:
XP_011499397
UniProt:
A0AAJ7DWV9
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MAPQSSVDDLITYFKTHNKVREHQSHTAKVHSVGWNCDGKLLASGSFDKCVCIFSLSQDR
LKQETTFRGHGGSVDQLCWHAFNPELLSTASGDKTVRIWDTRSQKCTANISTKGENINIS
WSPDGNTIAVGNKEDLVTFIDARAMKIKVEEQFNFEVNEISWNKDSDTFYLTNGQGCVHI
LSYPNLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLDWP
VRTISFSHDGKLLAAASEDLVIDIGEVESGEKVTDIPVEAATFTVAWHPKQYLLAYACDD
KDNYDRKRDAGSLKVFGFPNEN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcaaagtagcgtggatgatttgataacttatttcaaaacccataataaagtt
cgtgagcatcaaagtcatacagcaaaagttcatagtgttgggtggaattgcgatggaaaa
cttttagcatcgggttctttcgacaaatgcgtttgcatattttcactttcacaagatcgc
ttaaaacaagaaacgacatttcgaggacacggtggtagtgtagatcaattgtgttggcat
gcattcaatcctgaacttttgtcaactgcaagtggagataaaacggtacgaatttgggat
acaaggtctcagaaatgtacagcaaacattagtacgaaaggagaaaacataaatatttca
tggtcaccagatggtaatactattgctgtagggaataaagaagatttagtaacatttatt
gatgctagagctatgaaaataaaagttgaagaacaatttaattttgaagtaaacgaaata
tcttggaacaaagattctgatacattctatttaacaaatggacaaggttgtgtacatatt
ttaagctacccaaatttggaacttttacatgttattaaagctcatccaggaacatgtatt
tgtattgaatttgatccaactggtcggtattttgcaactggttcggccgatgctcttgtt
tctttgtgggatgctgatgaattgtgttgtttaaggacattttctcgattagattggcca
gtaagaactatttctttttcacatgatggtaaattgttggcagctgcatcagaggattta
gttatagatattggcgaagtcgaatctggtgaaaaagtgactgatataccagttgaagca
gctacatttacagttgcttggcatccaaaacaatacttacttgcctatgcatgtgacgat
aaagataattatgatagaaaaagagatgcaggtagtttaaaagtctttggatttcccaat
gaaaattaa
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