KEGG   Ceratosolen solmsi marchali (fig wasp): 105363413
Entry
105363413         CDS       T06056                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
csol  Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013  Nucleocytoplasmic transport
csol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105363413
  09122 Translation
   03013 Nucleocytoplasmic transport
    105363413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csol03019]
    105363413
   03041 Spliceosome [BR:csol03041]
    105363413
Messenger RNA biogenesis [BR:csol03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105363413
Spliceosome [BR:csol03041]
 Complex C
  Other components
   EJC/TREX
    105363413
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105363413
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_EML eIF2A RMC1_N WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR35_TULP_N DSE1_N WD40_RFWD3 Beta-prop_ELP1_1st B-prop_COPA_B_2nd PAC11 Beta-prop_TEP1_C Beta-prop_EIPR1 TRM82_WD Beta-prop_WDR75_1st Peptidase_S9_N Cytochrom_D1 PD40 Beta-prop_Nup120_160 Beta-prop_NWD2_C PROPPIN
Other DBs
NCBI-GeneID: 105363413
NCBI-ProteinID: XP_011499397
UniProt: A0AAJ7DWV9
LinkDB
Position
Unknown
AA seq 322 aa
MAPQSSVDDLITYFKTHNKVREHQSHTAKVHSVGWNCDGKLLASGSFDKCVCIFSLSQDR
LKQETTFRGHGGSVDQLCWHAFNPELLSTASGDKTVRIWDTRSQKCTANISTKGENINIS
WSPDGNTIAVGNKEDLVTFIDARAMKIKVEEQFNFEVNEISWNKDSDTFYLTNGQGCVHI
LSYPNLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLDWP
VRTISFSHDGKLLAAASEDLVIDIGEVESGEKVTDIPVEAATFTVAWHPKQYLLAYACDD
KDNYDRKRDAGSLKVFGFPNEN
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcaccgcaaagtagcgtggatgatttgataacttatttcaaaacccataataaagtt
cgtgagcatcaaagtcatacagcaaaagttcatagtgttgggtggaattgcgatggaaaa
cttttagcatcgggttctttcgacaaatgcgtttgcatattttcactttcacaagatcgc
ttaaaacaagaaacgacatttcgaggacacggtggtagtgtagatcaattgtgttggcat
gcattcaatcctgaacttttgtcaactgcaagtggagataaaacggtacgaatttgggat
acaaggtctcagaaatgtacagcaaacattagtacgaaaggagaaaacataaatatttca
tggtcaccagatggtaatactattgctgtagggaataaagaagatttagtaacatttatt
gatgctagagctatgaaaataaaagttgaagaacaatttaattttgaagtaaacgaaata
tcttggaacaaagattctgatacattctatttaacaaatggacaaggttgtgtacatatt
ttaagctacccaaatttggaacttttacatgttattaaagctcatccaggaacatgtatt
tgtattgaatttgatccaactggtcggtattttgcaactggttcggccgatgctcttgtt
tctttgtgggatgctgatgaattgtgttgtttaaggacattttctcgattagattggcca
gtaagaactatttctttttcacatgatggtaaattgttggcagctgcatcagaggattta
gttatagatattggcgaagtcgaatctggtgaaaaagtgactgatataccagttgaagca
gctacatttacagttgcttggcatccaaaacaatacttacttgcctatgcatgtgacgat
aaagataattatgatagaaaaagagatgcaggtagtttaaaagtctttggatttcccaat
gaaaattaa

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