Ceratosolen solmsi marchali (fig wasp): 105363442
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Entry
105363442 CDS
T06056
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105363442
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
105363442
3'-5' decay
Other 3'-5' decay factors
105363442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
AAA_22
PAM2
UvrD-helicase
AAA_16
AAA_7
ResIII
AAA_24
Motif
Other DBs
NCBI-GeneID:
105363442
NCBI-ProteinID:
XP_011499432
UniProt:
A0AAJ6YJV8
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MAAQSSSSSTSSNSNNNSNSNSNSNSNSSESSSNSSSRNNNSNSRESLHNEEQQQQQRGK
TDDFEVRADSEPTTDKGGNFYEKLRRGWLRTTAPKDVVVDDSEMVVEQTGSALNIRIPYS
SDGMTWTWTFEVATHDTKYLKNISLVLDSHQENFRIKSIINDMVCCKNLSIQEFVINKSI
DDISNPSVYMVEIEFRAANTGTYCQDVIFSFNDGPAVRRQLCVDCVLIEDLNRLEAAREY
LLYLTQQSSHGQKTQIVPFKSPFVPEREAREDKLCQFYPKPELNTFFLTHTTLKETGLDP
KNYRRRLHELVSIEEMARCEQIARYNEVTELRLSNNYILASDTDGSTVAKYAAPGELFAQ
LPLGREVSEDTKSGRLLLRSCNSLLVQKINFDEGQGSRPTLSDKIFEAHIEDKCNHTIYT
RLSKECVEHLGLVIDTNVKMHVQFVMNRTPFCEWRRAIDALPDTRLIFPESRINRQVNFD
WMPKWKHNFKNFRLNERQKVPVALMMAPDTEILPPILILGPFGTGKTSTIAQALRILLVN
DRTSRVILCTHSNSAADLYVKDFFDVWYKETNDPRLKPLRIYYKGRVRNTVHATVREYCP
SDENGRFRDPTSDDIANCGLVISTLATSSYLTALDLQPSHIIVDEAAQALECEVLACLAL
ATERTRIILAGDQMQLAPEVYSDLARERGLGMSLLERIHLTYEPGHPCRIQLCKNYRAHA
DIVKLTSDLFYGGEIEAGATLPRHPTYSPLTFYACQGIVMQGSNSTGYYNNMEAYEIAER
VAELRRSWPTEQWGPYGEGSIGVLAHYAEQVLRIRSELRNRRLFNVSVERVLNVQGKQFT
AIFISVVRTRHCSRHSAERQLSDYGFLTNPRLLNTAVTRAKSLVAVVGDPVALLSIGSCS
EHWRRYLRSASVHGIDAQELDFHLNQVQDMPTTPALNPLAKEFVPRNGTQTDNPYWIEYV
PMPINYPVIHCTVETGGLL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacagagtagtagcagcagcaccagcagcaacagcaacaacaacagtaacagc
aacagcaacagcaacagtaacagcagcgaaagcagcagcaacagcagcagcagaaacaac
aacagcaacagcagagagtctctccacaacgaggaacaacagcagcagcaacgaggcaag
acggatgattttgaggttagggccgactccgagccaacgaccgataaaggcggcaacttt
tacgagaagctgcgccgaggctggttgcgaaccaccgcacctaaggatgtcgtcgtcgat
gactcagaaatggtcgtggaacaaacgggatcggcgcttaatatacgaataccttattca
tccgacggcatgacctggacatggacttttgaagtcgcgactcatgatacaaagtacctc
aaaaacataagccttgtattagatagccaccaagagaattttagaattaagtcgattatt
aatgacatggtttgctgcaaaaacctgtctattcaagaatttgtgataaataagtctata
gatgatatatccaacccttcggtttatatggtggagattgagtttagagcagctaacacg
ggtacttattgtcaggatgtaatctttagtttcaacgatggaccagcagtgcgtcgtcag
ctctgcgttgattgtgtgttgatagaggaccttaatcgtctagaggcagcacgcgaatat
ctgctatatcttacccagcagagctctcacgggcagaaaacacagatagtaccgtttaaa
tcaccttttgtaccagaacgagaggcccgggaggataagctatgtcagttctatcctaaa
cctgaacttaataccttcttcttaacccacactacgttaaaagaaactggcctcgatcca
aagaactacaggaggaggctacatgaattggtcagtatcgaggaaatggctagatgcgaa
caaattgcacgatataacgaagtcactgagctcagactatcgaacaactacatacttgca
tcggatacagatggctctacagttgctaagtacgcagcacctggagaattatttgctcag
ttaccgctgggtcgcgaggtctcggaggacacgaaaagtggccggttattgctacgcagc
tgcaacagtctactcgttcagaagataaactttgacgagggccaaggcagtcggcccacc
ctaagcgacaagatattcgaggcccacatcgaggacaagtgtaaccacacgatttacacg
cggctgtcgaaggagtgcgtggagcatctcgggctagtgatcgacaccaacgtcaagatg
cacgtgcagttcgtgatgaatcgcacgcccttctgcgagtggcggcgagccatcgacgcg
ctgccggatacgaggctcatattccccgaatcgcgtatcaataggcaggtgaactttgat
tggatgcccaagtggaaacacaactttaaaaactttcgacttaacgagcggcagaaggtg
ccggttgcccttatgatggcgcccgacaccgaaatcctaccgccaattctcatactcggg
ccattcggcactggcaagacctcgacgatcgcccaggctcttaggattcttttggttaac
gataggacgagcagagttatactctgtacacacagcaacagtgccgcagatttgtacgtg
aaggacttcttcgatgtctggtataaggaaacgaacgatcctagactaaagcctttaagg
atctactacaaagggcgcgtgagaaatacggttcacgcaacggtgcgcgagtactgccca
tcggatgaaaatggacgcttccgggatcccacgagcgacgacatcgccaactgcggtcta
gttatttcgactctcgcgacttctagttacctgaccgccctggacctacagcctagccac
ataattgtggacgaggcggcccaggcgctcgagtgcgaggttctcgcttgtctagccctg
gccacggaacggacgaggataattcttgctggagaccaaatgcagctcgcccccgaggtc
tacagtgatctggcgagagagcggggcctcggtatgagtctcctcgagaggatccatcta
acgtatgagccaggacatccctgcaggatacaactctgcaagaactacagggcacacgcg
gatattgtaaagttgacctcggacctgttttacggaggggagatcgaagcgggtgcaaca
ttgcctagacacccgacttacagtccattgacgttctacgcctgccaaggcatcgtcatg
cagggctccaactcaactggttattacaacaacatggaggcatacgagatcgcggagcgc
gttgctgaactacggagaagttggccgacggagcagtggggaccttatggggagggctcg
atcggcgttctcgcccactacgcggagcaggtgctacgcattcgtagcgagctgcgcaac
cggaggctctttaacgtctcggtggagcgcgtcctcaacgtccaaggaaagcagttcacg
gcgatctttattagcgtggtgcgcacacgccactgcagtcgtcactcggccgagaggcag
ctcagcgactacggcttcctcacgaatcccaggctactcaatacggcggttacgcgagcc
aagagcctcgtcgccgtcgtcggagatccggtcgctcttctatctataggttcgtgtagc
gagcactggcgccgctatctacgctcagccagtgtccacgggatcgacgctcaggaattg
gactttcatctcaaccaagtacaagacatgccgacgacgccggcgctcaatcccctcgct
aaggagttcgtaccgaggaatggaactcagacggacaatccatactggatcgaatacgtc
cctatgcctatcaattatccagttatacactgcaccgtggaaaccggcggcctgttgtga
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integrated database retrieval system
