Ceratosolen solmsi marchali (fig wasp): 105363488
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Entry
105363488 CDS
T06056
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105363488
03036 Chromosome and associated proteins [BR:
csol03036
]
105363488
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105363488
Chromosome and associated proteins [BR:
csol03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105363488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_9
Tex_central_region
HHH_3
Tex_YqgF
Tex_N
OB_RRP5_4th
HTH_10
S1_RRP5
Bromodomain
Motif
Other DBs
NCBI-GeneID:
105363488
NCBI-ProteinID:
XP_011499509
UniProt:
A0AAJ6YK27
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
MSDFLDSEAEESEDEMLDRNKKKKLKKIHASESEEEEDDEEKLREELKDLIDDNPIDDES
DGEDSDTSQGSKKRKKSDDEDFDDRLDDEDYDVIEENLGVKVERKRFKRLKRIEAEESEE
EQEQEVEEERDAIANELFSNELGSGDEDERRSERSQRPAGEVEQYDDEGSDEESDADDFI
VDDDGRPIAEKRKKRRHIFADSALQEAQDIFGVDFDYDEFEKYGDDYEEEEEEEEDEYAD
DEIDTDRPKKTKKAAKKKTTKKSIFEIYEPSELKRGHFTDLDNEIRTTDIPERMQLRSVP
ISAATEEELTAEAQWIYNQAFERKTVSVQDAHLNEEAKERAKKGPQTVTKIKKTLDFMRN
QHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKEALLNLFRKMKRYQEDHI
MKDPDAPLPDNMRLIEEEDVKQLENVQTTEELNDSYHHFMLYYNQEIPKMQEIVRKQEKE
KRRLDRIQKHKQLIAEAEENGEEPPSEEILDEEEEEEPEEILKQAVRTGPYSICRRAGLE
SLSKKFGLPPEQFAKNLSEEYQIYEVEQEPMELNTVAAEYIGEKFQTAEEVLKAAQLMVA
IQLAREPLVRESVRRMYKEKAKISVRPTKKGIKLIDENHPVFTMKYLKDKPVRDLVGDQF
LKLVIAQDDKLITLSFSDQIEGNTTNNYVEQMKQLYYRDEFSKNVQDWNALRVGSVEMAL
TKMVIPDLKKELYSILLNEAKECVMRSCARKMYNWIKVMPYTCEFPDEEDEEWDTSKGLR
VMGLAYVSDFSIASFACMVAPDGECTDYLKLPHLLKRKNSFRESDKALKESDLVAMKNFI
ATKKPHIVVIGGESRDALMISEDIRECIAGLVTDEQFPSIRVEIMENELAGIYANSHKGV
SEFRDYPELLRQAISLARRIQDPLIEFSQLCNADEEILCLKFHSLQDQLNKEDLLENLYL
EFVNRVNEVGVDFNKAVQQPYSGNLVQFVCGLGPRKGQYLIKTLKQTNQRLENRTQFVTA
CHMGPKVFINCAGFMKIDTNSLGDSTETYVEVLDGSRVHPETYEWARKMAVDALEYDDED
ANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRSELNSRYKDLRVTYQ
PPTPEKLFDILTKETPETFYIGKLLEATVVGITYRKPKGEQLDQANPVRNDETGLWQCPF
CLKNEFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHIKNLSDKHVVNPEERVRIG
NRIHCRIIKIEVDRFSIEATSKSSDLADKNQEWRPQKDPYYDTEMESKDNLLEEEAKKVK
QRQIYVTRVIIHPSFRNITYADAEKLMQTMQQGEAIIRPSSKGDDHLTVTWKVTDDVHQH
IDVREEGKENKYSLGRSLWIGSEEFEDLDEIIARHINPMAAYTSELLDFKYYKAQIMGMK
DKAEDILKEQKKENPGGIPYIVSASKNYPGKFMLSYLPRTRCRHEYISVSPDGFRFRGNS
FPRVNDLFRWFKEHFRDPIPGQITPSTPRVYHNTPGMNMNGMNQEAIQRVAQNLPRHMLH
SLSQVANQTPHYPQTPGAASTATGYGGMHNAYAINTPYTPSGQTPYITPYQTPGQPTPRY
GEQTPTGHQMPGNQYTTSQNAMDWKKAAEAWARQTAPRASGSQGTPRYKQPYKSPRGTPH
TNSSPRSMSLSGDGTPLYDES
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcctggactccgaagccgaagagagtgaggatgaaatgctcgatcggaat
aaaaagaaaaagctgaaaaagattcatgcttcggaaagcgaagaagaagaggatgacgag
gagaaattaagagaagagctaaaggatttaatcgacgataatccaatagacgatgagagc
gatggagaagatagcgacacttcgcaaggctctaaaaaacgtaaaaaaagtgacgacgaa
gactttgatgatcgattggacgacgaggattatgatgttatcgaagaaaatttgggtgtt
aaagtcgaaaggaaacgtttcaaacgcttgaagagaatagaagcggaggagtcggaagaa
gagcaagagcaggaggtagaagaagagagggatgctatcgccaatgaattattttccaat
gaattaggatctggcgatgaagatgaacgtaggagcgaacgcagtcaaagacccgctggt
gaagtcgagcaatatgatgatgaaggaagcgacgaagaatccgacgccgatgacttcatt
gtcgatgacgatgggagacccattgcagaaaagcggaaaaaaagaaggcatattttcgct
gattcagcacttcaggaggctcaagatatttttggagtcgatttcgattatgatgaattt
gaaaaatatggcgatgactacgaggaggaggaggaagaggaagaagacgaatacgcggac
gatgaaatagatacagataggcctaagaaaacgaaaaaggctgcaaaaaagaagactacg
aaaaagagtatttttgaaatttatgaaccgagcgagcttaaacgcggtcactttaccgat
ttggacaacgagatacgtaccacggatattccggaacggatgcagcttcgctccgtaccg
atatccgccgccacggaagaggagctaaccgcggaggcccaatggatttacaatcaagct
ttcgagcggaaaaccgtgtcggttcaagatgcccacttgaacgaggaagcgaaggagcgt
gcgaaaaaaggcccgcaaacggtaactaaaatcaagaaaaccttggactttatgcgtaat
cagcatttcgaggtgcccttcatctccttctatcgaaaggaatatgttttaccggagttg
aacattaacgatctgtggaaggtttataaattcgacgccaagtggtgtcagttacgccag
cgtaaggaggcgctgcttaatctctttaggaagatgaagcgatatcaggaggatcatatt
atgaaggatccggacgcaccgttgcccgacaatatgaggttgatcgaggaggaagacgtt
aagcagctggagaatgtacaaacgaccgaggagcttaacgactcgtaccaccatttcatg
ctgtactataaccaagagataccgaagatgcaggagatcgtacgcaagcaagagaaggag
aagcggcgcttagatagaattcaaaagcacaagcagctgattgccgaggcggaggagaat
ggggaggagccaccatccgaagaaatcctcgatgaggaggaggaggaggagcccgaggaa
atacttaagcaagctgttcgtactgggccgtattcgatttgtcgtcgagcgggtctggag
agtctgtcgaagaagtttggtctgccacccgagcaatttgccaagaatctcagtgaggag
tatcagatttatgaggttgagcaagaaccaatggagctcaataccgttgctgcagagtac
attggcgaaaagttccaaacagccgaagaggtgcttaaagctgcccaacttatggtggcg
atacaactggcaagggagccattggttagggaatcggtaaggaggatgtataaggagaaa
gcaaagatctcggtgcggccaacgaagaaaggcatcaaacttatagatgaaaatcatcca
gttttcacgatgaagtacctcaaagataagccagttagggatctcgtaggagatcaattt
ttaaaattagtaatagcccaggacgataaacttattacattgtcattctcggatcagatt
gaagggaataccacgaataactatgttgaacaaatgaagcagctttattacagggacgag
ttcagcaagaatgtgcaggactggaatgccttgcgggttggtagcgtcgagatggctctt
acgaaaatggttatccccgatctcaagaaggaattgtattccattctgctgaacgaagcc
aaggagtgcgtgatgcgctcttgcgcccgcaagatgtacaactggatcaaagtgatgcct
tatacctgcgagttccctgacgaggaagacgaggagtgggacacgagcaagggcttgcga
gtgatgggtctcgcctacgtgtccgacttctccatagcgtcgttcgcgtgcatggtggcg
ccggacggcgagtgtacggattatttgaagctgccgcatctcctcaagaggaagaacagc
ttcagggagtcggataaagcgttgaaagagtcggatcttgtggccatgaagaatttcata
gccacgaaaaagccccacattgtggtgataggtggagagtcgagggacgctttaatgatt
agcgaggatattagggagtgcattgcaggactcgtgacggacgagcagtttcccagcata
cgcgtggaaatcatggaaaatgaattggccggcatttatgccaatagccacaaaggtgtc
tcggaattcagggactacccggaactcctgcgccaggccatttcgctggctcgtcgcata
caggatcctctcatcgagttctcccaactgtgcaacgccgacgaagagatactttgcctg
aaatttcacagtctacaagatcaactaaataaagaggatttgcttgagaatctctatttg
gaattcgtgaatcgcgtgaacgaggtcggcgtggacttcaacaaggctgtgcaacagcct
tactccggtaatctcgtgcaatttgtgtgtggcttgggtccacgtaagggccagtacctg
ataaagacgctaaaacagacgaatcagcgactggaaaatcgcacacagttcgtaacggca
tgccacatgggcccgaaggtcttcataaactgcgcgggtttcatgaaaattgacacaaat
agtctgggtgacagtactgaaacgtacgtcgaggtgctcgacggttcgcgcgtacatccc
gagacatacgagtgggcgagaaaaatggcagttgatgcattggagtacgacgacgaggat
gcgaatcccgctggtgcgttggaggagattctcgagtcgccggaaaggctcaaagatctc
gacctggacgcattcgcagaggaattggagagacagggatttggcaacaagtgcatcact
ctctacgacataagatcggagcttaatagcagatataaggacttgcgtgtaacctatcaa
cctccaacgcctgagaagctcttcgacatcctgacgaaggaaaccccggagacgttttac
attggcaagctgctcgaggcaacggtcgtcgggattacatataggaaacccaagggcgag
caactggatcaagcgaatccggtgcgcaacgacgagacgggactatggcaatgtcccttc
tgtctgaagaatgaattccccgagctctcggaagtatggaatcactttgacgcgggcgcc
tgccctggtaaggcgacaggcatcagactgcgcctggacaacggcatatccggctacatt
catataaagaatttgtcggacaaacacgtggtgaatccggaggagagagtacgtatcggc
aatcgcattcactgtcgcattatcaaaatcgaggtcgacagatttagcatcgaggccacc
agtaagagtagtgacctggctgataagaaccaggaatggaggccgcagaaggatccttat
tacgatacggaaatggaatccaaggataatttgcttgaagaagaagcgaagaaagttaag
caacgccagatatacgttacccgtgtgataattcacccgtcgtttcgtaatatcacgtac
gccgatgcggaaaagctaatgcagacgatgcagcagggcgaggccataattcggccctcg
agcaaaggtgacgatcatttgacagtgacgtggaaggtgacggacgacgtgcatcagcac
atcgacgttcgggaagagggtaaggagaataaatactcgctcggtcgtagcttatggatc
ggtagcgaggaattcgaggatctcgatgaaatcatcgccaggcacattaatcctatggct
gcatacacgtccgaattattggactttaagtactacaaagcacaaattatgggcatgaag
gacaaagccgaggatatactcaaggagcaaaagaaggaaaaccctggtggtattccatac
atcgtttccgcatccaagaattatcctggaaaatttatgctatcatatcttcctcgtact
agatgccgacacgaatatatttcggtctctccagatggttttcgatttagaggaaatagt
ttcccgcgagttaacgatcttttccgttggttcaaggaacactttagagatccaattcca
ggtcaaattaccccgagcacacctcgagtgtaccataatacaccgggtatgaacatgaat
ggaatgaaccaggaggccattcagcgtgtcgcccagaatcttccgcgacatatgctgcac
tcgctgtcccaggtggcgaatcagacgcctcactatccacaaacacccggggcggcgagc
accgccaccggatacggaggaatgcacaacgcctacgccatcaatacaccttacacacca
tcgggacagacgccatacatcacaccctatcagacgcccggtcagccgacgccacgctac
ggcgagcagacgccaaccggacaccagatgccgggtaatcagtacacgacgagtcagaat
gcaatggactggaagaaggcggccgaagcctgggctaggcagaccgccccacgagcgagc
ggcagccaaggtactccaagatacaagcagccttataaatcaccaaggggaacgccacat
acaaattccagcccgagaagtatgtctttgagcggagatggaactccactgtatgacgag
agctaa
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integrated database retrieval system
