Entry |
|
Name |
(RefSeq) nucleoporin Ndc1
|
KO |
|
Organism |
csol Ceratosolen solmsi marchali (fig wasp)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csol00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105363761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csol03019]
105363761
Messenger RNA biogenesis [BR:csol03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105363761
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
535 aa
MDKTADIVKAKCKELLVKRMFLAVAASIIVHFILMSGVILVTNLKITHPVEWIQDTWNVI
TCLRMWTYFLVFSMVIFLQGIICSKDYINPISYASSRFVKFCHIFTMHNLLVGSLFILLG
GILAWLHLSVEDSRFSSLIKNCETLQGYCLVEEHYFLLLEGFWIGFYFFTNFSYLDSRNL
QFCIIPRSKLSQVKRGIQIMITNTLLDAVWPTIYFLGFYSAFGNYCRSFFTSPFSLSIED
IPLDKISRLLSLSLIFYAWLHAVLFVLIIQSMHLFFQAYLTEWIPFVIEKIELTEKSKIS
LADALGMEKFPILRQLGYLDLVTIAQKDKTRRSILFTLSQPGGHPYNWNNIIEKSLSLIK
KFSEGLNSACSNQKEENPKLTNTVPISCAQTSDKLYNYHMRNLVSATPTIEQFENKLRHA
INDAQTVIWAADAISTLATVSLNEDPYGIVQKDLPEIIEVLLNVKQSLDKLQKLNISIRK
PMSDDKFLKQTLTALRSAVRRSLYRIVSHFKNYIDDLALSPLTVDHLQPFFTYRE |
NT seq |
1608 nt +upstreamnt +downstreamnt
atggataaaacagcagacatagttaaagcaaaatgtaaagagctattggtgaagcgaatg
tttttagcagttgctgcaagtatcattgtccacttcatattaatgagtggtgtaatatta
gttacaaatttaaaaataacacatccagtggaatggatacaagatacttggaatgttatt
acatgtttaagaatgtggacatactttttggtcttttctatggtcatatttttacaagga
ataatttgtagtaaagactacataaatcctatttcgtatgcctctagtcgatttgtaaaa
ttctgtcatatttttacgatgcataatttattagtgggtagtcttttcatattactgggt
ggcattcttgcctggttacatttatctgtcgaggatagtagatttagttctcttatcaaa
aattgcgaaacccttcaaggctattgtctcgtcgaggagcactattttttattattggaa
ggtttttggattggattttatttttttacaaacttcagctatttagactcgagaaatttg
cagttttgtattattcctcgatcaaagttgtcgcaagttaaaagaggcattcaaataatg
attacaaatactttattagatgctgtttggcctacaatttattttcttggcttttactct
gcgtttggaaactattgtagaagtttttttacttctcccttttccctttcgatcgaagat
ataccccttgacaaaatctcaaggctacttagcttatcgttaattttttacgcctggctt
catgctgtactctttgtccttataattcaaagtatgcacttattttttcaagcctacttg
accgagtggattccgtttgttattgaaaaaattgagttgaccgaaaagtctaagatatcg
ttagccgatgcattaggaatggaaaaatttcccattttaagacaattaggatacttggat
cttgtgacaatagcacaaaaggataaaacaagaaggtcgattctttttactttaagtcag
ccaggaggacatccttataattggaacaatattattgagaaaagtctgtctttgataaaa
aaattttccgaaggacttaattctgcttgttcaaatcaaaaggaagaaaatccaaaacta
actaataccgtaccaatttcttgtgcccaaacatccgataagctttataattatcatatg
agaaatttagtatcagctacaccaactattgaacaatttgagaataaattgagacacgcg
attaacgatgcgcaaactgttatttgggctgcggatgcgatatcaacactagctacagtt
tcattgaacgaagatccatatggcattgttcaaaaggatttgcctgaaataattgaagtt
ctactaaacgtcaagcagtcgttagacaagcttcaaaaattaaacatttctattagaaaa
ccaatgagcgatgataaatttttgaagcaaacactgacagcacttcgctctgccgttaga
cgaagtttgtatagaattgtttctcactttaagaattacattgatgacttagctctatct
cctttaactgtcgatcatttacaaccattttttacatatagggaatag |