Ceratosolen solmsi marchali (fig wasp): 105363915
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Entry
105363915 CDS
T06056
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csol03041
]
105363915
03016 Transfer RNA biogenesis [BR:
csol03016
]
105363915
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105363915
Spliceosome [BR:
csol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105363915
Transfer RNA biogenesis [BR:
csol03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105363915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105363915
NCBI-ProteinID:
XP_011500025
UniProt:
A0AAJ7DXH7
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MAAFEEMGVLPEITRALDEMEWVLPTDVQAEAIPLILGGGDVLMAAETGNGKTGAFCIPV
LQLVLETLKNKQLPKLTDEISSTWILNGSDSTNACYIIGNGLLCHSQHQKEWHGCRANKG
IQGSGKYYYEIIVKSEGLCRVGWSTPQAALNLGTDIFGWGYGGTGKKSNGNKFIEYGESF
SIHDAISCTIDLDNGEISFWKNGVDLGTAFYLNSKEKLETFLPAVVMKNVKISINFGTQP
FKYPLSSDYVAICNASENYVVNSSLNKSETVSTAKQIKNGPLAIIIEPNLELAEQTYNQI
EKFKKYIKNPEIKNLLLVGGESIKVHKTALNHGVDIVVGTPGRLEALVENGYLSLNQCKY
FILDEADGLLKQNYENLINKLHRLMINVRSDETRLQMVVCSASLHAIEVKNMAERLMHFP
VWIDLRGEDVIPETVHHVVVIVDPRKDNLWQKLRRHITTDGVHNNDNIENGNTAEALSEA
VKILKGEYCLRAIKEHKMDSAMIFCRTKLDCDNLESYLNLTGDKELTCVCLHSDRKPIER
KNNLNRFKQKEVKFLICTDVAARGLDVINLPFIINITLPDDKTNYLHRIGRVGRAERMGL
AISLVANVPEKVWYHGNWCLSRGRNCNQTNLLNQRGCCIWYNEQRLLADIEDHLNITIQQ
IENDIKVPINDFDGKVTYGEKQIGAVSNYEHHVEEMAPIATTLATLESQAQIIYLRRRQT
IR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttgaagaaatgggtgttttacctgaaattactagggctctcgatgaaatg
gaatgggtgcttcctacagatgtgcaagcagaagcaattccattaattcttggaggaggt
gatgtattaatggctgcagaaactggtaatggaaaaactggagccttctgtattccagta
ttacaactggtactggaaactttgaagaacaaacagcttccaaaattaacagatgaaatt
tcatcaacttggattttaaatggatccgatagtactaatgcttgttatataattggcaat
ggtcttctttgtcacagtcaacatcaaaaggaatggcatggatgtcgagctaataaaggt
attcaaggaagtggaaaatattactatgaaattattgtgaagtctgagggattgtgcaga
gttggatggtcaactcctcaggcagctttaaacttgggtacagatatatttggatggggc
tatggtggaacaggaaagaaaagtaatggaaataaatttattgagtatggtgaatctttt
agtatacatgatgctattagctgtactattgacttagataatggagaaataagtttttgg
aaaaatggagtagatctaggcacagctttttatctaaattctaaagaaaagttagaaact
tttttacctgctgtggttatgaagaatgtaaaaatatccattaattttggaacacaacca
tttaaatatcctctttcatctgattacgttgcaatttgtaatgcatcagaaaattatgtt
gtaaacagttctttaaacaaaagtgaaactgtaagtactgcgaagcaaattaaaaatggt
cctctagctattataatagaaccgaatcttgaacttgccgaacaaacatataatcaaatt
gaaaagtttaaaaaatacataaaaaatcctgaaataaaaaacctactattagttggcgga
gagagtatcaaagttcataaaactgctttaaatcatggagtagacattgttgttggaact
ccaggaagattagaagcactagtggaaaatggatatttatcattgaaccaatgcaaatat
tttatattagacgaagcagatggattattaaaacaaaattatgaaaacttaattaacaag
ttacatagacttatgattaatgtgagaagtgatgaaacaaggttgcaaatggtagtttgt
tcagctagtttgcatgctattgaagtaaaaaatatggccgaacgtttgatgcattttcca
gtatggatcgatttaagaggagaagatgtaattccagaaacagtacatcatgttgtagta
atagttgatcctcgaaaagataatttgtggcaaaaattaagaagacacattacaactgat
ggtgtacataataatgataacattgaaaatggaaatacagctgaggctctatcagaagca
gttaaaatactaaaaggagaatactgtcttagagctataaaagaacataaaatggatagt
gctatgattttctgtagaacaaaactcgattgtgataatttagaatcttatttaaatcta
accggtgataaagaattaacttgtgtttgtttacatagtgatcgtaagccaattgaacgt
aaaaataatttgaacagatttaagcagaaagaagtcaaatttttaatttgtaccgatgta
gcagcaagaggattagatgttattaacttaccttttattattaatataactctacctgat
gacaagacaaactatcttcatcgtattggacgagttggaagagctgaaagaatgggttta
gctatttctttagtggctaatgttccagaaaaagtatggtatcatggtaattggtgttta
tctagaggtcgtaattgtaatcaaacaaatctgttgaaccaacgtggatgttgcatttgg
tacaatgaacagaggttattagcagatatagaagatcacttaaatataacaattcaacaa
atagaaaatgatattaaggtaccaataaatgattttgacggtaaagttacatatggtgaa
aagcaaataggagcagtatcaaattatgaacatcatgtcgaagaaatggctccaatagca
acaacattagcaactcttgaatctcaagcacagattatttatttaagaaggcgccaaact
attcgataa
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