Ceratosolen solmsi marchali (fig wasp): 105364008
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Entry
105364008 CDS
T06056
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105364008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csol03021
]
105364008
03036 Chromosome and associated proteins [BR:
csol03036
]
105364008
Transcription machinery [BR:
csol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105364008
Coactivators
SAGA/TFTC/STAGA complex
105364008
Chromosome and associated proteins [BR:
csol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105364008
STAGA complex
105364008
TFTC complex
105364008
SAGA complex
105364008
SLIK complex
105364008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
Tricorn_2nd
WD40_like
Beta-prop_WDR35_TULP_N
VPS8_N
WDR54
Cytochrom_D1
Beta-prop_NUP159_NUP214
Swm2
VID27
DUF5713
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
105364008
NCBI-ProteinID:
XP_011500143
UniProt:
A0AAJ7DXL9
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDKDKSTMLALLQLLHKYNFKDTEELFRKEANLIDVSIEDAQQSDSEVNSVLSAYKSEGD
PALYEKSYGELKKFVEGSLDIYKHELGTILYPVLVHMYLELIYNNHSDEGKQLVEKYSPN
LEEYYQNDLKKLSHVTKREHMAGNELTDTFKSNQFIIRMSRDTLSILKRYLQEKKHSILL
NIIQEHLYFDMYEGVARNKNQIEATSGALVGEATRQDNKAKVYYGLLKEPDIQCVPPSVT
EEEEEDNGGPDSDKPKKKKPKKDPLFSKKTKSDPNAPPIGRMPLPNLKDVDKLEKIKALR
EASKRVVLGPDSLPSICFYTLMNSVNTVISAEIAEDSSLLAVGFNDSAIKVWSLVPQKLR
IMKDGEQLADVEREAEDVLVRMMDEKTAETVRTLYGHSGPVYCLSFSPDRNLLLSCAEDG
TVRLWSLHTWTCVVCYKGHLFPVWSVKFSPHGYYFATGSHDKTARLWATDSHQPLRIFAG
HYSDVDVVQFHPNSNYIASGSSDMTIRLWDCVSGNQVRLMTGHKAPIYSLAFSAEGRFLA
SAGADSRILIWDLAHGHLVAALPSHTASVYCLSFSRDGNILVSGSLDCSIKLWDFTKLAE
EMSLEDVNVSHNPDVKTCTESYLLRSFGTKNSPILALHFTRRNLLFGIGRFDAS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggacaaaagtactatgcttgctctgttacagctacttcataaatacaatttt
aaggataccgaagaattatttagaaaagaggctaatcttattgacgtatcgattgaagat
gctcaacaaagtgattcggaagttaatagtgtgttatcagcatataagagcgaaggtgat
ccggctctttatgaaaaatcctatggagaacttaaaaaatttgttgaaggatcattagat
atttacaaacatgaattaggaacaattttatatccagtattagtacacatgtacttggaa
cttatatataataatcactctgatgaaggaaaacaacttgttgaaaagtatagtcctaat
ttagaagaatattatcaaaatgacttgaaaaaactatcgcacgtaacgaaacgtgaacat
atggctggtaatgaattaactgatacatttaaatcaaatcaatttataatcagaatgtct
cgcgatactttatcaatattaaaacgatatttacaagaaaaaaaacatagtattttattg
aatataatacaggagcacttgtattttgacatgtacgaaggtgttgcaagaaataagaat
caaatcgaagcaacttctggtgctcttgtaggagaagcaactagacaagataataaagca
aaagtttattatggacttttgaaagagccagatattcaatgtgttcctccatcggttacc
gaagaagaagaagaagacaatggtgggcctgattctgacaaaccaaagaaaaaaaagcct
aagaaagacccactattttctaaaaaaactaaatcagatcctaacgctcctccaattgga
agaatgcctttacctaatttaaaagatgttgataaactagaaaagattaaggcattgagg
gaagcctctaaaagagttgtactaggtcctgatagtttaccatccatatgtttttacact
ttaatgaattccgtaaatacagttatatcagctgaaattgcagaagattcaagcttatta
gcagtcggtttcaatgattctgcaattaaggtttggagtttagttccccaaaaattaaga
ataatgaaagatggtgagcaattagcagatgttgaacgtgaagctgaggatgttttagtg
agaatgatggatgagaagacagcagaaacagttcgtacattatacgggcacagtgggcct
gtttattgtttatcattcagtccagatagaaatttattactctcgtgcgcagaagatggc
acagtaagattatggtctcttcatacatggacttgcgttgtttgctacaagggtcattta
tttcctgtatggtcagtcaaattctctcctcatggttattactttgcaacaggttcacat
gataaaacagcaaggctttgggcaaccgattcccaccaaccacttagaatatttgctggt
cattactcagacgtggatgttgtacaatttcaccctaattcaaattatatagcttcagga
tctagtgatatgacaattcgtttatgggattgcgtttccggtaatcaagtgagactaatg
acaggtcataaggctcctatatattctttagctttttcggctgaaggaagatttctagcg
tctgctggggcagattcacggatattaatatgggatcttgcacatggacatttagtcgcg
gcactcccgagccacacagcaagtgtatattgcctttcatttagtagggatggaaacatt
cttgtatctggttccttagattgttcgattaaactctgggattttacaaaattagccgaa
gagatgagcttagaagatgtaaatgtttcgcataatcctgatgtcaaaacatgcactgaa
tcatacttattaagaagttttggtacaaaaaattcacctattcttgcattacattttaca
agaagaaatttattatttggtattggaaggttcgatgcaagctaa
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