Entry |
|
Name |
(RefSeq) protein SMG7-like
|
KO |
|
Organism |
csol Ceratosolen solmsi marchali (fig wasp)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csol00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105364371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csol03019]
105364371
Messenger RNA biogenesis [BR:csol03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105364371
mRNA cycle factors
Common to processing body (P body) and stress granule
105364371
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1255 aa
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWMCQRQLQKIYQQVLILDLEYALDRKVE
QELWNLGFKNYIAMLQLQAKDRRNPKRGESQAMLSWCLEAASGFYLTLLQEICTAFDLDL
PFRRKNYVYGCISPWKAVEKLSAPHKSSCFYACQYCLVHLGDIARYRNQNKQAELFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYVRSVAVKHPFPVASANLAKTLSSALNDNN
YKIEGKTKLTSQEYLAVFLKLHGVLYNLGDLSIATTYVKLLTDTLTALIATESFTSWRLV
QMLIINLYALQHLAGISTESPELMRTDQLSADEKMCQNCILDLIAGSLSALLLPVYTIKN
AIINYFALPTIKLCLDWIQLRPIILEEAAFTSRLQIWPSLCVLLNGLQNCVVDFDYNQYA
KVPLPEDRDLQGFLPLEKTFETLRFTNTDLEGDIAILNKLRAIRILHLGRKISEHQVNGA
TLISLGIEDQYKGQKFVSATEGTGLSNELMKELEELSLNKDKQPIVANSPVPSESASSRG
SSEIDSLIVEFGLEKRGGILKPQGSLERNRDSSDLVIGSEINSLPSSARKPRQNVAMQAI
MRRAETEQKQVTFKNVSPIIIEETDKSKAVPTAIVTSCSSPVKTNNIKNIVVSSTTSNGT
SHNTINNTPLIQPRPSLMPNAPLNNKYNKLSSIVQQEQQRQQSSSSPPQQQSLQLHLQKQ
QFEQSLKLDNHHQSNVISQQQRENVILSTPSVKQLPLADIQTPVLQRTPPPGLGQFSLHH
QQQQQQSSQQQQQQQQPPPPPPPPLPQPLSQPQPLPQPQQAAISLNAPGCYQSQSFSVQA
PQFNKNFIANPSVSLQQYTVTAPMQGQFGNSLSQASQSMSYPTNVSVNQSRVLQQQQQQQ
QKQQQQQQQQQRGSFVALAQSNSMLTQGLNLTPPTPQQPIGQSIGLAIQPNSLNVHPQNL
LASTHRPVNGLNLQGHVGISAASAYQTGLQDSGIANTSVPTIQQHQQQQQQQSQQQQQQQ
GFGNTGFGQTGFAQMQQQKQISPKAYGNGQQQITFPNQVNLTKSQQQQSVGGYAMFRGYD
TKDYNPWKEPQPPQPPVTWWGSNNVPSGQMIQQPGHSKEHPILAVTDAFQNWANSTISNN
QRINNLPLTAGNNYQQNQLQARLYSGRNNFDDVRPFEMEQKQPQSTSTGSTYSLFSGNSW
GVNGQLSSATNNISSLSHQDQMKTRLNQQSLWSGPGPSPLERLLEQQKSLREGGT |
NT seq |
3768 nt +upstreamnt +downstreamnt
atgggcctaaaagcggctgtgcaagctctgaagaaagcagaaccattaaaagacaaggtt
caacgttgtaaagatcttttaaacgataatgatgcgtggatgtgtcaacggcaacttcag
aaaatttatcagcaagttcttatccttgacctggaatatgccctggatcgtaaagtggaa
caggaattatggaaccttggttttaagaattatatagctatgctgcagttgcaggcaaag
gatcgtagaaaccccaaacgtggagaatcgcaggctatgcttagctggtgtttggaagca
gctagtggattttatttaactttgctacaagagatatgtactgcttttgatttagatcta
ccatttagaagaaaaaactatgtgtatggatgtatttcaccatggaaagctgttgaaaaa
ttgtccgcgccccataagtcatcgtgcttttatgcttgtcaatactgtctcgttcatttg
ggagacattgctcgttatagaaatcaaaacaaacaggccgaactcttttatcgacatgcc
gtatcgctctcaccatccagtggacagccttacaatcagttagctcttttagaagcttcg
cgtggtgacaaacttggtaccgtttttcattacgtgcgttcagtggctgtcaaacatcca
tttcctgtagcttcagcgaatctagcaaaaactttgtcatctgcgttaaatgataacaat
tataagattgaaggaaagaccaaattaacttctcaggaatatctagctgtattcttaaaa
cttcatggagtcctttataatttaggagatctaagtattgcaacgacatatgttaaactt
ttaaccgatactttgactgcattgatagcaactgaaagttttacttcatggagattagta
caaatgcttataatcaatttgtatgctttacaacatttggctggaatatctacagaaagt
ccagaattaatgagaaccgatcagttgagtgcagatgaaaaaatgtgtcaaaattgtatt
cttgatctgattgctgggagtttatcagctctattgctacctgtttatacaataaaaaat
gcaataatcaactattttgctttaccaactattaaattgtgccttgattggattcagctg
agaccaataattttggaggaagcagcgtttacttcaagacttcaaatatggccaagtctt
tgcgttctgttgaatggcttacaaaattgtgttgttgatttcgattacaatcaatatgct
aaagtaccattgccagaagatcgagatctacagggatttttaccattggaaaaaactttc
gaaacacttcgttttactaatacagacttagaaggtgacattgcaatattgaataagcta
cgagctatacgtatacttcatctgggtcggaaaatatcagaacatcaagtgaatggtgcc
acattgatttctttgggcatcgaagatcaatataagggacagaaatttgtatcagcgacc
gaaggaacagggcttagtaacgaattaatgaaagaattggaagaattgagtttaaataag
gacaaacaaccaattgtagcaaatagtcctgtaccttcagaatcagctagtagcagaggg
tcttcagaaatagatagtttaatagttgaatttggtttggaaaaacgtggaggtatatta
aagcctcaaggctccttggaacgtaatcgcgattccagcgatctcgtaatcggtagcgaa
attaattccttgccgtcgtcagctcgtaaaccccgccagaatgttgcgatgcaggcaata
atgcgtcgcgctgagactgagcaaaaacaagtgaccttcaaaaacgtttcgcccattatc
attgaagaaaccgataaaagtaaagctgtcccaacagccatcgtcacctcgtgttcatct
cctgttaagactaataatattaagaatatcgtcgtttcctcgactacgagcaacggaacc
agtcacaatactatcaataatacgccactgattcagcctcgaccgtctctcatgccaaat
gcacctttaaacaacaaatataacaaattaagttcgatagtacagcaagagcaacagcgt
caacagtcatcgtcatcaccaccccaacaacagtcattacaactccatctgcagaagcag
caatttgagcaatcacttaagctggataatcatcatcagagtaatgtcatatcgcagcag
caacgtgaaaatgttattctttctacaccgagtgttaagcagttaccccttgcggatatt
cagacgccagtgctccaaagaacgccaccacctggtctcggccagttttctctgcatcac
cagcagcagcaacaacaatcatcacaacagcagcaacagcaacaacaaccgccaccaccg
ccaccaccaccactaccacaaccattatcacagccacaaccactaccacaaccacaacaa
gctgcaatatcgttaaatgcacctggttgctatcaaagtcaaagtttcagtgttcaggca
cctcagtttaataaaaatttcatagcaaatccctcggtttccctgcagcaatatacagtc
actgctccgatgcaggggcaatttggcaacagcctgtctcaggcttctcaaagtatgtcc
tatccaactaatgttagtgtcaaccaaagtagggtgcttcaacaacagcaacagcaacag
cagaagcagcaacaacaacaacaacaacaacaaagaggaagttttgttgcattggcgcaa
agtaattctatgttaactcaaggtttaaatctgacaccaccaacaccgcaacaaccgata
ggtcaaagtatcggattagcaatacaaccgaattcgctgaacgtccatcctcaaaatctt
ttggcaagtacgcatcgcccggtcaatggcctgaatttgcagggccacgtgggtataagc
gcggcatcagcttatcagactggtctacaggattcaggaatagccaatactagcgtgcct
actattcaacagcatcagcagcaacaacagcagcaatcgcaacaacagcagcagcagcag
ggcttcggtaatactggttttggtcaaactggttttgcacagatgcaacaacagaagcag
atttcgcctaaggcgtacggcaacgggcagcagcaaattactttccctaaccaagtgaat
ttgacgaagagtcagcaacagcagtctgttggcggatatgcaatgttccgcggttacgat
actaaggattataatccgtggaaagagcctcagccacctcagccaccagttacttggtgg
ggcagtaataatgtgccatccggacaaatgattcaacagccaggacatagcaaggagcat
cccattctggccgttaccgacgcctttcaaaactgggctaactctactatttcaaacaat
cagcgcattaacaatttgcctcttacggccggcaacaattatcagcagaaccagctacag
gctcgtttatatagtggcagaaataatttcgacgacgttagaccatttgaaatggaacag
aagcagccacagtcaacgtcaacgggtagtacatattcgttattcagtggaaatagctgg
ggcgttaatggtcaactgtcttccgctacaaataacatatcttcattgagtcatcaggat
cagatgaagacgcgcctcaatcagcaatctttgtggtcaggtccagggccctcgccactc
gaacgtctcctcgagcagcagaaatcattacgcgagggtgggacctga |