Ceratosolen solmsi marchali (fig wasp): 105364790
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Entry
105364790 CDS
T06056
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03013
Nucleocytoplasmic transport
csol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105364790
03015 mRNA surveillance pathway
105364790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105364790
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105364790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
DUF5794
Motif
Other DBs
NCBI-GeneID:
105364790
NCBI-ProteinID:
XP_011501120
UniProt:
A0AAJ7DYJ5
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MSDSRRRRKSQQSGGSDDLSESYDELNATKETQSSEHTEDQHDSEYDTAGSDSDTESQDK
NQRESGDGQEEEKTPKKLECDEDRRNPQYIPKRGTFYEHDVRTADEVNDEITETQPEREV
KDKKVWKDKEDRWDHDRYNDEEQAPKSHAELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKVAGSVPMHKTNIKKSNRTGEDFPLLNSKDNDVSKMTEEEPVITSAWY
SNKNKIHLNKIQNFPPLQQTDGQKPKSKQFTNSQVNENKVPNERNNLVWKREVKHTPYIQ
NTNECNVATGDTEKIVIVKTTPRDNKRSPQVQETVNFTANKSRGRGFKANTNNNIVGSRT
IESKPKGRGSGLINTDNRRSNIEHEQIISDMKHMNLSTEGPSYHHATRQNKHFYSQTSSQ
QHSTLVPPRIQPSHPQQQPPPSQQQAPQQTSQQDISTNRPKRYSSLRQRPPIAEGPTNSG
QPNYQSAPQHTYYPPPQAGSSRAVLESPGYPPGPYEQTAPVSAAGTAMTGQSVIPIPPGA
QPTNYAPHAPHATHAPHAPPPFLVPPPQFIPSQTAPPSIINYVTGPNGPIFQPNYQGYNP
AAVQPGPPPPQEVGLYQPQGCTYYSPAQQQQQQQQQPVPLRRPKAAIPILPPPDNLQNQN
NRGRNRNTQQQLQPQVQEQLQQQQQQEQAIQQQLQQHQQHLIEQQQEEQHQQLIVQQQHE
HQQLIEQQQQEHQQLIEQQLQNQHQQLIEQQLQDQHQQLIKQQQQDQHQQLIEQQQQKQQ
QFIEQQLKDQHQQLIEQQQQDQHQQLIEQQQQKQSPLIEQQLQDQPQQHEHQQLIEQQQQ
KHQQFIEEHLQNQHDPLIKQQQQDEHQQLIQQQEHEQVLEQEDQHQKLIEQQQLDDGNSS
SKIVNQLNEEITSQVVEETTVADKERSVVSSEEKLLEAVLIDTEAGQSKMLTKVEVVVPD
IVPDVKEKAVVTTIATISEATITVTTASAEVTADTPVTCIVGSTATIASKDMKELSTKSV
QLLSGKNETDCSIKESSVIEEAAA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtcgtcgtcgtaggaaatctcaacagtccggcggttcggatgatctttca
gaatcgtatgacgaactcaacgccacgaaggagacgcagagcagtgaacatacagaggat
cagcacgactcagaatatgatactgcaggcagcgattcagatacagaatctcaggataag
aatcagcgagaaagtggagacggtcaggaggaagaaaaaactccaaaaaagttggagtgt
gatgaagatcgaagaaatccacaatatattcctaaacggggtactttttatgagcacgat
gttagaacagcagatgaagtaaatgacgaaattacagaaacacagccagaacgtgaagta
aaagataagaaagtatggaaagataaagaagatagatgggatcatgataggtataatgat
gaagaacaagccccaaaaagccatgctgaattaatagcagtatatggctacgatatccga
aatgaggaaggaccacctagagcacgaaggagaagaagatatggacgtggtccaaataaa
tacacacgtaattgggaagatgaagatgcttatggaaaagttgcaggaagtgtacctatg
cataaaactaatattaaaaaatccaatcgaactggagaagattttccgttattaaattca
aaggataatgatgtgtctaaaatgacagaagaggaaccagtaattacatcagcttggtat
agtaataagaacaagatacatttgaataaaatacaaaattttcctccattgcaacaaact
gatggtcagaaaccaaaatctaaacaatttacaaatagtcaagtaaatgaaaataaagtt
ccaaatgaaagaaataatttagtttggaaaagagaagtgaaacatactccatatattcaa
aatacaaatgaatgtaatgtagctactggtgatactgaaaaaattgtgattgtaaaaact
actcctcgggataataaaagatcaccccaagtacaagagactgtaaactttacagcaaat
aaaagtcgcggacgtggttttaaagctaatacaaataataatatagttggaagtagaacg
atagaatctaagccaaaagggagaggctctggtcttatcaatacggataatagaagaagt
aatattgaacatgaacaaatcattagtgatatgaaacatatgaatttatctacagaaggt
ccgtcatatcatcatgccacaagacaaaataagcacttttacagtcaaacatctagtcaa
cagcattcgactttagttcctccgcgtattcagccaagtcatccgcaacaacaaccacct
ccatctcaacaacaagctcctcaacaaacatctcaacaagacatatctacaaatcgaccg
aagcgatattctagccttcgtcaacggcctccaatcgcagaagggcctacaaattcagga
caaccaaattatcaatctgctcctcaacacacttattatcctcctcctcaagctggaagt
tcaagagctgttttagaatcaccaggatatccaccgggtccatacgagcaaacagcacca
gtatcagcagcaggaaccgcaatgaccggtcagtcggtaattccaatacctcctggagcc
cagccaactaattatgcaccgcatgctcctcatgcgactcatgcgcctcatgcgccacca
ccgtttcttgtgccaccaccacaattcataccatcgcaaacggcgccgcccagcattata
aattatgtcacaggaccaaatggtcccattttccaacccaactatcaaggatataatcct
gctgccgttcaaccaggtccaccacctcctcaagaagtaggactttaccaacctcagggc
tgtacttattacagtccagcacagcagcagcagcaacaacaacaacaacctgttcctctt
agacgaccgaaagcagcaatacctatacttccaccacctgacaatcttcaaaatcagaac
aaccgaggacgaaatcgaaatacgcaacaacaattacaacctcaagtacaagaacaattg
caacaacagcaacaacaagaacaagcaatacagcagcaactgcaacagcatcagcaacat
ttaatagaacaacagcaggaagaacaacatcaacagttaattgtacagcagcaacatgaa
catcaacaattgattgagcagcagcaacaagaacatcaacaattaattgagcagcagcta
caaaatcaacatcaacaattgattgagcagcagctacaagatcaacatcaacaattgatt
aagcaacagcaacaagatcaacatcaacagttaattgagcagcagcaacaaaaacagcag
cagttcattgagcagcaactaaaagatcaacatcaacaattgattgaacaacagcaacaa
gatcaacatcaacagttaattgagcagcaacaacaaaaacagtcaccgttgattgagcaa
caactacaagatcaaccgcagcaacatgaacatcaacaattaattgagcaacagcaacaa
aaacatcaacaattcattgaggagcacctacaaaatcaacatgatccattgattaagcaa
cagcaacaagatgaacatcaacaattgattcagcaacaggaacatgaacaggtgcttgaa
caggaagatcaacatcagaaattaattgaacagcagcaactagatgatggtaatagtagt
agtaaaattgtaaatcagctaaacgaagaaataacttctcaagtagtagaagaaacaact
gttgcagacaaagaaagatcagtagtatctagcgaagaaaaactattagaagcagttctg
atcgatacagaagcaggacagtcaaagatgctaactaaagtcgaagttgttgttcccgac
attgtaccagatgtaaaagaaaaagcagttgtaacaacgatagcaacaatctcagaagca
acaataactgtaactacagcatccgcggaagtaacagcagataccccagtaacgtgtatc
gtcgggagtactgcaacaatagccagcaaggatatgaaagaactttctacaaagtctgtt
caattattgagtggaaaaaatgagacggactgtagtattaaggaaagttctgtgatcgaa
gaagcagctgcctaa
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integrated database retrieval system