Ceratosolen solmsi marchali (fig wasp): 105364947
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Entry
105364947 CDS
T06056
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csol03009
]
105364947
Enzymes [BR:
csol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105364947
Ribosome biogenesis [BR:
csol03009
]
Eukaryotic type
90S particles
Helicases
105364947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_19
nSTAND3
AAA_22
HA2_N
AAA_30
ATPase
ResIII
Flavi_DEAD
PhoH
AAA_16
ABC_tran
AAA_23
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105364947
NCBI-ProteinID:
XP_011501287
UniProt:
A0AAJ7DYN9
LinkDB
All DBs
Position
Unknown
AA seq
1193 aa
AA seq
DB search
MGKNKGFNLKGRNKSVISIDNSATKKIIVDIAHQQDKFDECNALVLPNEKRKTKHQNKQV
TVQRLLSNKKRKQLEKIIDKKKKKSDRATLLDELSKINIPEDELKQYVSITTVQTKGLKR
HLQDVEFETVLNSVNSNEADDPAEYIVNSLKRSKRQRNALLHKFNYQNNIEDPNTLGVDE
QSDTDNEPNELDEIEHVEPENDEEKDNIQNNDAEEKNSIREEKGCEEKNNDEIPSKTETQ
ESEVSETKNVPAQPVKVDEKKPSVFISLNRKPEIQEARLKLPILAEEQAVVEAINENPVV
IITGETGSGKTTQVPQFLYEAGYAQGRMIGITEPRRVAAISMSQRVAEEMNLTNKEVSYL
IRFEGNVNPETKIKFMTDGILLKEIQNDFLLKKYSVVILDEAHERNVYTDILIGLLTRIV
SLRTKRKDPLKLIIMSATLRVDDFIDNPRLFKVKPPIINIESRQFPVTIHFNKITKIDYL
KEALIKTIKIHTQLPEGGILIFLTGQREIKTLVNKLRKTFPFKKNKRSSAPAAKEKELEE
TEKDENESEQNSDDEFFSKGSKNKRKTKISEPIKLPEIDLDAYSAFPPDDSFNDLIDLDN
SSSDVENELDEDQELININSGSSRFPPLWVLPLYSLLPSREQAKVFEPPPEGCRLCVIAT
NVAETSLTIPNIRYVVDTGKCKTKMYDKVTGVTTFRITYTSKAAANQRAGRAGRMGPGHC
YRLYSSAVFNDQFEKFNEPEICHRPIDDLVLQMKIMNIDKVVNFPFPXXXPGYEQLKLAE
IRLSLLGALEQSHNTTKRNLYCAKITNLGKTMAAFPVLPRYGKMLALSQQYNLIAYTVCM
VTALSVQELFVEACGADGNVNKWRQLRRFWAGTGNSLLLGDPMILIRAVGAAEYASTKGK
LTKFCIDNGLREKAMIEIRKLRHQLTNEILINVPNLNLDINPEMQPPTDTQAKLLRQIIL
SGMIDQIAHKLTAEEIKEFSSKAEGNEVKWKYAYKTLEMEEPVFMHSSCVLRKEVPEWIV
YQEVYETNKTYMRGITAIEPEWLPKFAPSLCSLKEHMVDPLPRYDAETGKIFCHTTGTFG
PAGWELPIIEIEFPNTLEGIKWFTRFFLEGEIFPKLKKFVPFMLSTPGTVNKSWAKLIPR
IEIITKLLLSNGIMSKDKLTDMWSKDPNFLLTAYQSWLPESAHAEVMLMWPPL
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaataaaggttttaatttgaaaggaagaaacaagtcggttatttcaattgat
aattctgcgacaaaaaaaataatagttgacatcgcccaccagcaagataagtttgacgaa
tgtaatgcgttagttttaccaaatgaaaaaagaaaaaccaaacatcaaaataaacaagta
accgtacaacgtttactttcaaataaaaaaaggaaacaattagagaaaattattgataag
aagaagaagaaaagtgacagggcaacattgttagatgaattatcaaaaattaatattcct
gaagatgaattgaaacagtacgtgtctataacaactgttcaaactaaaggattaaagaga
catttacaagacgttgaatttgaaacggttttaaattctgttaattccaatgaagccgat
gatcctgcggaatatattgttaattcgctaaagagatctaagagacaaagaaatgcttta
ttacacaaatttaactatcaaaataatattgaagatccaaatactcttggagttgacgaa
caaagtgatactgacaatgaacctaacgaacttgatgaaatagagcacgttgaaccagaa
aatgacgaggaaaaagataatattcagaacaacgatgcggaagaaaaaaattccatacgc
gaagagaaaggatgcgaagaaaagaataatgatgaaattccttcaaagactgaaacacaa
gaatctgaggtttcagaaacgaaaaacgtacctgcgcaaccggtaaaagtagatgaaaag
aagccatcagtttttataagtttaaatagaaaaccagaaattcaagaagctagattgaag
ctaccaattttggcggaagaacaagcagttgtcgaagcaattaatgaaaatcctgtagtc
attataacgggagaaacaggaagtggaaaaacgacacaagtgcctcaatttctttatgaa
gcaggatacgcccaaggtagaatgataggtataacagagccaagaagagtagccgccata
tctatgagtcaaagagttgccgaagagatgaatctcacgaataaagaagtttcttatctt
atacgatttgaggggaatgttaatcccgaaacaaaaataaaattcatgacagatggtatt
ttattaaaagaaattcaaaatgactttctgttaaaaaaatattccgtagtaattttagac
gaagctcacgaacgtaatgtttatacagatatattaattggtttattgactcgtattgtt
tcgcttagaacaaaaagaaaagatcctcttaaattaattattatgtcagctactttacga
gtagacgatttcatcgataatcctaggttatttaaagttaaacctccaattataaatatt
gaatctagacaatttcctgttacaatacattttaataaaataaccaaaattgattattta
aaggaggccttaataaaaaccataaaaattcacactcaactgccagaaggtggtatttta
atttttttaacaggccagcgtgaaattaaaacattggttaacaagctacgcaaaacattt
ccatttaaaaagaataaacgaagtagtgcccctgcagcaaaggaaaaagagttagaagaa
actgagaaagacgagaatgaaagcgaacaaaattcggacgatgaatttttctcaaagggc
tcgaaaaataaacgaaaaacaaaaatatccgaaccaataaaattacctgaaattgatctt
gatgcttattccgcctttccaccagatgatagttttaatgacttaattgacctcgataac
tcaagttcggatgtcgagaacgagctcgacgaggaccaagagcttattaacataaatagt
ggttcatcgcgcttcccacctctgtgggttctaccactttattctttattacctagtcgc
gagcaagctaaagtgtttgagccgccacccgaaggttgtcgtttatgtgttatagcgaca
aatgtagcagaaacatcgttgactattccgaatataagatacgtggtagataccggtaaa
tgtaagactaaaatgtacgataaagttacgggtgtaactacttttcggattacttatacc
agtaaagctgctgcaaatcagagagctggtagagctggtagaatgggccccggtcattgt
tacaggctttattcgtcggcagttttcaatgatcaattcgaaaaattcaatgagccagaa
atttgtcacagaccgatcgatgatttagttttacaaatgaaaataatgaatatcgataag
gtggttaatttcccgttcccnnnnnnnnnnccaggatacgagcaactaaagttagcagaa
ataagattatccttacttggtgctctagaacagtctcataatactacgaaaagaaatctc
tattgtgccaagataacgaatctaggaaaaaccatggctgctttcccggttttacctcga
tatggaaaaatgttggctctatcgcaacaatataatctcattgcatatactgtttgtatg
gttacggcattgtcggtgcaagagcttttcgtcgaagcttgcggagccgatggaaatgtg
aataagtggaggcaacttcgtcgtttctgggctggtacgggcaacagtttacttcttggt
gatccaatgatattgatacgagctgttggtgctgctgaatatgcctcgacaaagggtaaa
ttaacaaagttttgcatcgataatggattacgagaaaaagcaatgattgaaataagaaaa
ttacgtcatcagttaaccaatgaaattttaataaacgttccaaatctgaatctcgatatc
aatccagaaatgcaacctccaacagatacgcaagcaaaattacttcggcaaattattctt
tctggtatgatcgatcaaattgctcataaattaacagccgaagaaattaaagaatttagt
agtaaagccgagggtaatgaagtaaaatggaaatatgcatataagactttagaaatggaa
gaacctgtttttatgcattcatcctgtgtactgagaaaagaagttccagaatggattgta
tatcaagaagtttatgaaacgaataagacttacatgcgtggcattactgccattgaacca
gaatggctacctaaatttgcaccttccttatgttcgctaaaggaacatatggttgatcct
ctcccaaggtacgatgcagagaccggaaaaatattttgccacacaactggaacttttggt
cctgctggctgggaattaccaattattgaaatagaatttccaaacactttagaaggaatt
aaatggtttacgcgatttttcttggaaggtgaaatttttccaaagttaaaaaaattcgta
ccatttatgttatcaacgccaggaactgtcaataaatcttgggcaaaattaataccacgc
attgaaataataactaaattacttttatcaaatggaataatgtcaaaggataagcttact
gacatgtggtcaaaagatccaaactttttattgacagcttatcagagttggttacctgaa
tctgcacatgctgaagtgatgttgatgtggcctcctttgtaa
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