Ceratosolen solmsi marchali (fig wasp): 105365128
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Entry
105365128 CDS
T06056
Name
(RefSeq) LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific ribonuclease subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105365128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csol03019
]
105365128
Messenger RNA biogenesis [BR:
csol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105365128
mRNA degradation factors
3'-5' decay
Pan complex
105365128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
105365128
NCBI-ProteinID:
XP_011501524
UniProt:
A0AAJ7DYX4
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
SSAALNTANVTKHLSNLSLETSKKVAVATTTTTPEFLPGRGVSNSNSTSPNIFNNSYHSQ
ENVGGTTYFYVQNPVVDPAITVVDGNEIVGNVEPPPLAYIYPGTPSYLQLMKVSKPASNN
VESVTPPPPQTPSFFVNETLRIEILQKNALTLAQPDHIQYPDIPAEVENYHDLVPMELMQ
KPVSTVLGYQSSTYKATNIKNGTKYCLRRIHEFSLTNTKCMVLVDMWKKLAHTNLVQLRE
VFTTKAFGDHSIVFVYDYHPGSETLLNKHFSATELNGYTDPFSSDPNAPRPYSHTKNTIL
RQQHNSMLPESIIWSYIIQLTAALRVIHAAGLAYRCLDPTKVLLTSRTRLRISCAAVPDV
VTFDGNTPNPLSLIXIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYL
LSNQARRSVTDLMPMIGARFYTQLDAAQFCSDVLENELTKELENGRLFRLIVKLATINER
PELNLDSQWSETGDRYMLKLFRDYVFHQVTADGKPWLDLAHVVSCLNKLDVGAPDKICLV
SRDEQSVLIVSYAELRHCMETSFNELVQASKGFAAEAV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
tcaagtgcagcattaaatacagcaaatgtgacaaaacatttatctaacttatcattggag
acgtctaaaaaagttgctgttgctactactactactactcccgagtttttacctggaaga
ggtgtttcaaatagtaatagcacatcacccaacatctttaataattcttatcattcccag
gaaaatgttgggggtacaacatatttttatgtacaaaatcctgttgttgatcccgctatc
actgttgtagatggaaatgaaattgttggcaacgtagaacctccaccactagcttatatt
tatccaggcacaccatcttacctacagttaatgaaagtgtcaaagcctgcatctaacaat
gtagaatccgttacgccaccgcctccacagacaccaagtttctttgttaatgaaactttg
cggatagaaatacttcaaaaaaatgcactaacactagctcaaccagatcatatacaatat
ccagacatacccgctgaagttgaaaattatcatgatttggttccaatggagttaatgcaa
aaacctgtttcaacagtacttggctaccaatcatcgacatataaagctacaaatattaaa
aacggaacaaagtattgtctacgacgtattcacgaattcagcttaacaaatacgaagtgt
atggtactcgttgatatgtggaaaaaattagcacatacaaatcttgtacagttaagagag
gtgtttactacaaaagcatttggtgatcattcgatagtatttgtttacgattatcatcct
ggctctgagacattattaaataaacatttctctgcaactgaactaaatggctatacagat
ccattttcttctgatccaaatgctccacgtccatacagtcatacaaagaatacaatactt
agacagcagcataatagcatgcttccagagagtataatttggagctatataattcaactt
actgcagcccttcgtgtgattcatgcagctggtctagcatacaggtgcttagatcctacc
aaagttttgttgacttctcgtacgcggctgcgtataagttgtgctgcggtaccggacgtc
gttaccttcgatggtaacaccccgaatcctttaagcctgatcnctattgcgctcggaaaa
ttggttctcgcactggcctgtcgcagtcttcttgcagttcatcgagataatatgcaagca
tctcttgaactcgttgcacgctcttactcaaccgatctccggaatctcatactgtattta
ttatcgaatcaagcacgaagaagtgtgacagatttaatgccaatgattggtgcgcgtttt
tatacccaattggatgcggcacagttttgttcggacgtgcttgagaatgagctaacgaaa
gaacttgaaaatggaaggctttttaggctaattgtcaagctggccactattaatgaacga
cctgagcttaatcttgattcacaatggtcagaaaccggagatcgttacatgctcaaattg
tttagggattatgttttccatcaagttacagctgatggaaagccttggttagatttagct
catgtcgtatcgtgtttaaataaattagatgttggtgcaccagacaagatctgcttagtt
tcacgagacgaacaaagcgtgcttattgttagctatgctgaattgcgacactgcatggaa
acttcgttcaacgaactagtacaagctagtaaaggctttgctgcagaagctgtctaa
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