Ceratosolen solmsi marchali (fig wasp): 105365514
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Entry
105365514 CDS
T06056
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csol
Ceratosolen solmsi marchali (fig wasp)
Pathway
csol04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csol00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105365514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csol03036
]
105365514
Chromosome and associated proteins [BR:
csol03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105365514
REST complex
105365514
Heterochromatin formation proteins
Other heterochromatin formation proteins
105365514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
105365514
NCBI-ProteinID:
XP_011502008
UniProt:
A0AAJ6YPU1
LinkDB
All DBs
Position
Unknown
AA seq
1521 aa
AA seq
DB search
MKRVRGVDEITPPTAATLKHSGGGGAVVTSGGGSIDYHTSGGIGVVSGQAVRSVSSKDMP
GSIQFSQAQQQYPGAIVVPTAAPSPVKGSATVGNLSTSSTCAASNITSSVNLHSTGLGGT
GNHNMGPQTPVPSSQVQPHTQQPSAIRHKMIQAPTPPASNLSGTSTSSQQFQRLKVEDAL
SYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGFNTFLP
PGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPIASPPTQPAKAQPV
VQIMQGSGSIHHTITNNISNNNLTIHGPSSPPVPSYNNSHVTTAQAQAVSQALSQAQDGV
PSTGQTQQNQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRTLKESGHIGX
XXXSGGAIPGSGKHLTEAEVYSQVAKLFENQEDLLLEFGQFLPDATSQQSALSAMFQSNK
VGAVNDHATILKKPLGLKTTYNNSGAVPREHRDLTGPGGLERESRDHRDRDRERERTGVR
DIGNSGQKFGHSTGQLKRSPSFTTSMSTGNSHVPHGPPPPKKHKVASVRDISIAEVGKHG
TLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIISKTELVQLVTPFLGRFPELLRWFK
DFLGHLPESTASSTTSTCTNQSGAATVSCVNIEALPNNVVRSHQDRPQGDLAMEIDYSAC
KRLGASYCALPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVSSRKTQFEEFIYR
CEDERFELDGVIETNAATIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKR
IYGEKAADIIDGLKKNPMVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDH
QGINFKQNDVKALRSKSLFNEIEILYDERHEQADENGENQNGSGPHLILAYKDKSVLDDA
ANLLIHHVKRQTAIHKEDKQRIKLLLKHFVPDLFFHPRQELSDDEQDEDNEKDEMNSVSC
GNSTQTATTTTASIGGGLQGSRNKTPPSPAPSSTVIKHDPDIKPPIHALSTDPEEAYTLF
MGSNNWYLFLRLHQILCERLTRMYDRAVALADEESRYKQQRKESTAVALRLKPKGEIEIE
DYYPAFLDMVKNVLDGNMESNAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDLV
CQQCMELFQREQKQPKESNGAGGFCSTAYLRIPCETAYQRKAEKTMAEENCFKIYIYKKN
CKMTIELLDTEGEETVESNCRDRDRESVTATEKWSSYVERFSSSATGQTSPKDVPISSDN
EPPANHPIDGNGWSSLSKILAGRKRVYLYRNVRQYRKHTAQKMRAFSPDAVNSEKIADPD
NKKSYDAGAEAMDGSDLVTSDEMQCTFNLNNYRVIYVVNQESTLYKKGCFTRAKQCHSIV
SKSMNAKFQQWHFKWVTKNVVDAQHRLCQDWLMGRYENLIPHKTRVITDNDQARSPYRQY
NRYCIDRLQLEQQLDQIKPGE
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgttcgcggggtggacgaaataacaccgccaacagcagcaacgttaaaacat
tcgggcggtggaggagctgttgtgacaagtggaggtggtagtattgactaccacacaagt
ggtggcataggagtggtttctggtcaagctgttagatctgtatcttccaaagacatgcca
ggtagcatacagttttctcaagcccaacagcaatatcctggtgcgattgttgtgccaaca
gcggcgccctctccagtcaagggaagcgctacggttggtaatctatcgaccagttccaca
tgtgcagcaagtaacattacttctagtgtaaacttgcatagcactggccttggtggtacg
ggcaatcacaatatgggtccacaaactcctgtgccaagctcccaggtgcaaccacatacg
caacagccttccgctataagacataagatgattcaggcgccaacacctcctgctagtaac
ttaagtggaaccagtaccagctctcaacaatttcaaaggctaaaagtagaagatgcttta
tcttatcttgatcaagtcaagtacaaatttagcgatcagccacaggtttacaatgatttc
cttgatattatgaaggaatttaaatcgcaaagtatagatactccaggtgttataacaagg
gttagccatttatttaagggacatcctgaacttatagttggtttcaacacttttttacca
ccagggtataaaattgaagtacaagccaatgagcaaggatatgcttttcaagtctcagtt
agtatgccaagtccaacagccactcatacagctacactctctcaacatcattgtacagtt
aatgttggatcccctcctatagcaagcccacctactcagcctgctaaagcacaacctgtt
gtacaaattatgcaaggttctggaagtatacatcatactattaccaataacatttcaaat
aacaatttaactattcatggaccatcgtcaccacctgttccatcgtataataattcccac
gtaactacagctcaggctcaagctgtaagccaagctctaagccaggcacaagatggagtt
cctagcactggtcagacacaacaaaatcaacccgttgagtttaatcacgcgattaactat
gtcaataaaattaaaaatcgatttcaaggtcaacccgataagtacaaacgttttctcgaa
attttacatacgtatcaaaaagaacaacgaacgcttaaagaatctgggcacatcggtnnn
nnnnnnngaagtggtggtgccattcctggcagtggaaaacatcttacagaagctgaagtc
tatagtcaagtggctaaattatttgaaaatcaggaggatcttcttttagaattcgggcag
tttttgcctgatgcaacgagtcagcaaagtgccctgtctgctatgtttcagagtaacaag
gtgggagcggtcaatgatcacgcgacgatcttgaagaaacctttaggtttaaagacaacg
tacaacaactctggggcggtgccacgagagcaccgtgatttgacgggtcctggcggcctc
gagcgtgagagtcgggaccatcgggacagggatcgagaacgcgaacggacaggagtgcgg
gacatagggaattctggacagaagttcggtcacagcactggtcagctcaagcggagtcca
tcttttaccacgtccatgtccaccgggaattcacatgtaccccatggcccgccgcctcct
aagaaacacaaggtcgcatcggtgcgggatatctctatagctgaggtggggaaacacggc
accctcaacgactacgccttcttcgacaaagtgcgaaaagcattgaggtcgcaggaggtg
tatgaaaatttcctgcgctgcttggtcttgttcaaccaagaaattatatccaagactgaa
ctagtgcaattagttacgccgttcctcgggcgttttcccgaactactgcgatggttcaag
gattttcttggccatctaccggagtccacagcatcgtcgacgacgtcaacctgtacgaac
cagagtggcgccgctaccgttagttgcgttaatatcgaagcgctacccaacaatgtggta
cgaagccatcaagacagacctcaaggtgatcttgctatggaaattgactactcagcttgc
aagagattgggcgcctcttattgcgccctacccaagtcctacgtgcaaccgaagtgtaca
ggcaggacgcaattgtgtaaagaggtcttgaacgatacttgggtgtcgtttccaacttgg
tcggaggacagtacgttcgttagttctagaaaaacccaatttgaggagttcatatatcgt
tgcgaagatgagcgattcgaattggatggtgtgatagagacgaatgccgcgacgattagg
gtgctcgaaggagttcataaaaagatgagtaggatgtcacaggaggagcttcaaaagttc
aagctggatgactgtttggggggatgttcgccaacaatccatcaacgtgctttaaagagg
atatacggcgagaaggcagcggacattattgatggtcttaaaaaaaatcccatggtagcg
gtaccagtcgttttacggagactgaaaagtaaagaggaagagtggcgggaagctcagaag
ggcttcaataaaatctggagggagcaaaacgaaaagtattaccttaagtccttggatcac
cagggcattaacttcaaacaaaatgatgtcaaggcgctaaggtctaagagcttatttaat
gaaatcgaaattttatacgacgagaggcatgagcaggccgatgaaaatggcgaaaatcaa
aacggcagtggaccacacttgattttagcttacaaagataaatctgtcttggatgacgcg
gctaatctcttaatacatcacgttaaacgtcagactgctattcataaagaggataagcaa
cgaataaaacttcttctcaaacactttgttcctgatctattctttcatcctcggcaagaa
cttagcgatgacgagcaagatgaagataatgaaaaggatgaaatgaactcggtatcgtgc
ggcaacagtacgcaaacggctacgacgacaactgcctcaattggcggcgggcttcaaggt
agtaggaataaaactccgccctcgcccgcaccatcctctactgtaataaaacacgatcct
gacatcaaaccccctattcatgctctctcgactgatcctgaggaagcttacacacttttc
atggggagtaataattggtacctatttctgaggcttcatcagatactttgtgaaagatta
acaagaatgtatgacagagctgtagcccttgcagacgaagaatctcgatacaaacagcaa
cgaaaagaaagtacagctgttgctttgaggttgaagcctaaaggtgaaattgaaatagaa
gattactatccagcctttctcgacatggttaaaaatgtcttggatggtaatatggagagt
aatgcatacgaagataccctcagagaaatgtttggaattcacgcatacattgcttttact
ttggacaaagttgtaacttatgctgtcagacagcttcaacatttagtttcggatctcgtt
tgtcaacaatgtatggagctatttcaacgggagcaaaaacaaccaaaagaaagcaatggt
gccggtggcttctgttccacagcctatttaagaataccttgtgaaaccgcgtatcaaagg
aaggctgaaaaaacaatggccgaagaaaactgctttaaaatatatatttataaaaaaaat
tgtaaaatgacgatagaattattggacacggagggtgaggagactgttgagagcaattgt
agagaccgcgacagggagtcagtgacggcaacagagaaatggtcttcttacgttgagaga
ttctcgtcatctgcgaccgggcaaacaagtccaaaggacgtcccaatttcgtcagacaat
gagccaccagccaatcatcctattgatgggaatggatggagctctttaagcaagattttg
gcaggtcgaaaacgagtatatctttaccgaaatgttcgccaatatcgcaagcacacggcc
caaaagatgagggccttctcacctgatgcagtgaattctgaaaaaatagctgatccagac
aacaaaaagtcgtacgatgcaggagccgaagcgatggatggatcggatcttgttacgtcc
gatgaaatgcaatgtacgttcaatttgaacaactatcgtgttatctacgttgtcaatcaa
gaaagtactctgtataaaaaaggctgttttacgcgagcaaagcagtgtcattcaatcgta
tccaaaagcatgaacgcgaaatttcaacagtggcatttcaaatgggtgactaagaacgtt
gttgacgcccaacataggctttgtcaagattggctgatgggtcgttacgaaaacttgatc
cctcacaaaacacgtgtgataacggataatgatcaggcacgctcaccttatcgacaatac
aatcgatactgcattgatcgattgcagttggagcagcagctcgatcaaatcaaacctggc
gagtag
DBGET
integrated database retrieval system
